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The map label for this gene is ybgK [H]

Identifier: 119717200

GI number: 119717200

Start: 3163476

End: 3164372

Strand: Reverse

Name: ybgK [H]

Synonym: Noca_2976

Alternate gene names: 119717200

Gene position: 3164372-3163476 (Counterclockwise)

Preceding gene: 119717201

Following gene: 119717195

Centisome position: 63.47

GC content: 80.16

Gene sequence:

>897_bases
ATGAGCACGCACCCGAGCCTGCACGTGCTGGCGGCCGGGCCGCTGACGCTGGTCCAGGACCGGGGCCGGTCCGGGCTGGC
GCACCTCGGCGTCCCGCGGGCCGGCGCGCTCGACGCGCCCGCGGCCGCACTGGCCAACCGGCTGGTCGGCAACGACGCCG
ACGCCGCGGTCCTGGAGGTCGTGCTGGGTGGGCTCGAGGTGCGCGCCGAGACCGCCTGCTGGGTCGCGGTCACCGGGGCG
CCGGCCCCGTTGGAGATCGACGGCGCGGCACGCGGGCACGGCCGGGCCGAGCGGCTGCCCGCCGGCGCGACGCTGCGGCT
GGGCCGGCCGCGGACCGGTGTGCGGACCTACCTGGCGGTCGCCGGCGGGATCGCGGTCGAGCCGGTCCTCGGGTCGCGCT
CCACCGACACCCTCGCGTGGGTCGGGCCACCACCCGTGCTGCCGGGCGCGACCCTCCCGCTGGGTCCGCCGCACACCGTG
CCGCGCCCCCTGGACACCCCGCCCGCGCACCGGCCCGCGCCGCTGCGGGTGGCCCGCGGGCCCCGGGCCGACTGGTTCGC
GAGCGACGCGCTGGACGTGCTGTGCGGCTCGGCGTACGTCGTCGAGGCGGACTCGAACCGGGTGGGGCTGCGGCTGGCCG
GGCCCGCGCCGGCCCGGGTGCGCACCGGCGAGCTGCCCAGCGAGGGCATGGTGCTCGGCGCGGTGCAGGTGCCGCCGAGC
GGCCGGCCGGTGGTGTTCCTGGCCGACCACCCGCCGACCGGCGGCTACCCGGTGCTGGCCGTCGTGCACCCCGACGACCT
GTGGCGCTGCGCGCAGCTGCGGCCGGGGGAGCCGGTGCGGTTCAGCCCGGCTCCTCCTCCGGCTCCTGCTCCGGGCGCGG
CGGTTCCCAGGCGGTGA

Upstream 100 bases:

>100_bases
GCTGGCGGCTGCTCGGCCGCACCGACGCGGTGTTGTGGGACCCCGACCGGGAGCGGCCGGCGCTGCTCGCCCCCGGCACC
CGCGTCCGGTTCGTGCCGGC

Downstream 100 bases:

>100_bases
GCTCGGGGTCGTCGGAGGGGTAGCTGCGCACCGGGCCCGGCGGGGTCTCGGCGGTCTCGAACCGCACCGTGACCACGCCC
CGGCCCGATCCCCACACCCA

Product: urea amidolyase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSTHPSLHVLAAGPLTLVQDRGRSGLAHLGVPRAGALDAPAAALANRLVGNDADAAVLEVVLGGLEVRAETACWVAVTGA
PAPLEIDGAARGHGRAERLPAGATLRLGRPRTGVRTYLAVAGGIAVEPVLGSRSTDTLAWVGPPPVLPGATLPLGPPHTV
PRPLDTPPAHRPAPLRVARGPRADWFASDALDVLCGSAYVVEADSNRVGLRLAGPAPARVRTGELPSEGMVLGAVQVPPS
GRPVVFLADHPPTGGYPVLAVVHPDDLWRCAQLRPGEPVRFSPAPPPAPAPGAAVPRR

Sequences:

>Translated_298_residues
MSTHPSLHVLAAGPLTLVQDRGRSGLAHLGVPRAGALDAPAAALANRLVGNDADAAVLEVVLGGLEVRAETACWVAVTGA
PAPLEIDGAARGHGRAERLPAGATLRLGRPRTGVRTYLAVAGGIAVEPVLGSRSTDTLAWVGPPPVLPGATLPLGPPHTV
PRPLDTPPAHRPAPLRVARGPRADWFASDALDVLCGSAYVVEADSNRVGLRLAGPAPARVRTGELPSEGMVLGAVQVPPS
GRPVVFLADHPPTGGYPVLAVVHPDDLWRCAQLRPGEPVRFSPAPPPAPAPGAAVPRR
>Mature_297_residues
STHPSLHVLAAGPLTLVQDRGRSGLAHLGVPRAGALDAPAAALANRLVGNDADAAVLEVVLGGLEVRAETACWVAVTGAP
APLEIDGAARGHGRAERLPAGATLRLGRPRTGVRTYLAVAGGIAVEPVLGSRSTDTLAWVGPPPVLPGATLPLGPPHTVP
RPLDTPPAHRPAPLRVARGPRADWFASDALDVLCGSAYVVEADSNRVGLRLAGPAPARVRTGELPSEGMVLGAVQVPPSG
RPVVFLADHPPTGGYPVLAVVHPDDLWRCAQLRPGEPVRFSPAPPPAPAPGAAVPRR

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=284, Percent_Identity=39.7887323943662, Blast_Score=172, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6319685, Length=307, Percent_Identity=31.9218241042345, Blast_Score=127, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 30457; Mature: 30326

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTHPSLHVLAAGPLTLVQDRGRSGLAHLGVPRAGALDAPAAALANRLVGNDADAAVLEV
CCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
VLGGLEVRAETACWVAVTGAPAPLEIDGAARGHGRAERLPAGATLRLGRPRTGVRTYLAV
HHCCEEEEECCEEEEEECCCCCCEEECCCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHH
AGGIAVEPVLGSRSTDTLAWVGPPPVLPGATLPLGPPHTVPRPLDTPPAHRPAPLRVARG
HCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
PRADWFASDALDVLCGSAYVVEADSNRVGLRLAGPAPARVRTGELPSEGMVLGAVQVPPS
CCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCEEECCCCCCCCEEEEEEECCCC
GRPVVFLADHPPTGGYPVLAVVHPDDLWRCAQLRPGEPVRFSPAPPPAPAPGAAVPRR
CCCEEEEECCCCCCCCEEEEEECCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STHPSLHVLAAGPLTLVQDRGRSGLAHLGVPRAGALDAPAAALANRLVGNDADAAVLEV
CCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
VLGGLEVRAETACWVAVTGAPAPLEIDGAARGHGRAERLPAGATLRLGRPRTGVRTYLAV
HHCCEEEEECCEEEEEECCCCCCEEECCCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHH
AGGIAVEPVLGSRSTDTLAWVGPPPVLPGATLPLGPPHTVPRPLDTPPAHRPAPLRVARG
HCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
PRADWFASDALDVLCGSAYVVEADSNRVGLRLAGPAPARVRTGELPSEGMVLGAVQVPPS
CCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCEEECCCCCCCCEEEEEEECCCC
GRPVVFLADHPPTGGYPVLAVVHPDDLWRCAQLRPGEPVRFSPAPPPAPAPGAAVPRR
CCCEEEEECCCCCCCCEEEEEECCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]