Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is crcB2 [H]
Identifier: 119717181
GI number: 119717181
Start: 3142888
End: 3143400
Strand: Reverse
Name: crcB2 [H]
Synonym: Noca_2957
Alternate gene names: 119717181
Gene position: 3143400-3142888 (Counterclockwise)
Preceding gene: 119717182
Following gene: 119717180
Centisome position: 63.05
GC content: 75.24
Gene sequence:
>513_bases ATGTCCGTGCCGTGGGTCGACCCGGACGTCGACCTGCACGCCCCCGGGCAGCACCGCGAGTGGAGCCGGCACCGGTTCGT GCTCCCGGCGATCGCGCTGGGCGGGATGCTCGGCGCCTCCGCGCGGTACGCCGCGGCCCGGGTGTGGCCGACCCCCGAGG CGGGGGTGCCCTGGACGACGCTCGGGGTCAACGCCGTGGGCTGCCTGCTGATCGGGGTGCTGATGGTGTTCGTCGTCGAG GTCGGGGGCGCGCACCCGCTGCTGCGGCCGTTCGCCGGGGTCGGGGTGCTGGGCGGGTTCACCACGTTCTCGACGTACAC CGTCGATACCGTCTCGCTCCTCGACGCCGGCCGTCCGGCGGTCGCGCTCGGCTACTGGGCGGGCACCGTGCTGGTGGCGC TCGTGGCCGTGCTGGTCGGCGTCGTGGCGGCCCGCGCGGGCGTGCTGTCGGCGACCCGGCTGCGCCGTCGTCGGCGCGCA CAACGCACCACGAGAGGAGAGCAACAGCCATGA
Upstream 100 bases:
>100_bases GAGTTCATCGTGCAGGGCGCCTACGAGGTCGACGTCGAGGCGATCGACGCCTGACCCCACGCCCGACCAGCCCTCGCACC AGCGTCCCGGAGGAGGCCCG
Downstream 100 bases:
>100_bases CCAGTGACCTGGCCCCCGAGGAGCCGCGAGCCCGCGGGGACCTCGACGGCCCCGCGACCCGGCTGACCATCTACGTCGGC GAGTCCGACACCTGGCACCA
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSVPWVDPDVDLHAPGQHREWSRHRFVLPAIALGGMLGASARYAAARVWPTPEAGVPWTTLGVNAVGCLLIGVLMVFVVE VGGAHPLLRPFAGVGVLGGFTTFSTYTVDTVSLLDAGRPAVALGYWAGTVLVALVAVLVGVVAARAGVLSATRLRRRRRA QRTTRGEQQP
Sequences:
>Translated_170_residues MSVPWVDPDVDLHAPGQHREWSRHRFVLPAIALGGMLGASARYAAARVWPTPEAGVPWTTLGVNAVGCLLIGVLMVFVVE VGGAHPLLRPFAGVGVLGGFTTFSTYTVDTVSLLDAGRPAVALGYWAGTVLVALVAVLVGVVAARAGVLSATRLRRRRRA QRTTRGEQQP >Mature_169_residues SVPWVDPDVDLHAPGQHREWSRHRFVLPAIALGGMLGASARYAAARVWPTPEAGVPWTTLGVNAVGCLLIGVLMVFVVEV GGAHPLLRPFAGVGVLGGFTTFSTYTVDTVSLLDAGRPAVALGYWAGTVLVALVAVLVGVVAARAGVLSATRLRRRRRAQ RTTRGEQQP
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 17971; Mature: 17840
Theoretical pI: Translated: 11.67; Mature: 11.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPWVDPDVDLHAPGQHREWSRHRFVLPAIALGGMLGASARYAAARVWPTPEAGVPWTT CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHEECCCCCCCCCCCHH LGVNAVGCLLIGVLMVFVVEVGGAHPLLRPFAGVGVLGGFTTFSTYTVDTVSLLDAGRPA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC VALGYWAGTVLVALVAVLVGVVAARAGVLSATRLRRRRRAQRTTRGEQQP EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SVPWVDPDVDLHAPGQHREWSRHRFVLPAIALGGMLGASARYAAARVWPTPEAGVPWTT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHEECCCCCCCCCCCHH LGVNAVGCLLIGVLMVFVVEVGGAHPLLRPFAGVGVLGGFTTFSTYTVDTVSLLDAGRPA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC VALGYWAGTVLVALVAVLVGVVAARAGVLSATRLRRRRRAQRTTRGEQQP EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11572948; 12692562 [H]