Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is dut [H]
Identifier: 119717132
GI number: 119717132
Start: 3090702
End: 3091148
Strand: Reverse
Name: dut [H]
Synonym: Noca_2908
Alternate gene names: 119717132
Gene position: 3091148-3090702 (Counterclockwise)
Preceding gene: 119717135
Following gene: 119717131
Centisome position: 62.0
GC content: 73.6
Gene sequence:
>447_bases GTGACCAGCGACCTCGAGATCCCGGTGCAGCGGCTCGACCCGGGCCTCCCGCTGCCGGCGTACGCCCATCCCGGCGACGC GGGCGCCGACCTGCTCACGACCGTGGACGTGACCCTGGCGCCGGGGGAGCGGGCGATGGTGCCGACCGGCATCGCGCTCG CCCTGCCCGAGGGGTACGCCGCCTTCGTGCACCCGCGCTCCGGCCTCGCGGCCCGGCACGGGCTGTCGATCGTCAACACG CCGGGCACCATCGACGCCGGCTACCGGGGCGAGATCAAGGTGATGCTGGTCAACCACGATCCGCGCGAGCCGATCGAGCT GCGCCGCGGCGACCGGATCGCCCAGCTCGTCGTGCAGCGCGTCGAGCGCGCCCGGTTCACCGAGGTGGGGGAACTCCCCG CTTCGGTCCGTGGTGCCGGGGGTTACGGTTCTACCGGTGGTTTCTGA
Upstream 100 bases:
>100_bases CGCAGCGGCACGCCCAGGCGCTCGCTGTAGACGGGGGTGAGGGTCACGGGCGGAATCCTTCCATTCCTCGGCCGGGGGCC GGGCGGTAGGGTCCCGCGAC
Downstream 100 bases:
>100_bases TCCCGTCTGAGGAGTGCTCGTGAAGTTCCGTCGCAAGTCTGCCGACGCCGAGGCGGCGTCCGAGATCTCGGCCGGGTCCG AGGCCGCGGACCTCGTCGTC
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTSDLEIPVQRLDPGLPLPAYAHPGDAGADLLTTVDVTLAPGERAMVPTGIALALPEGYAAFVHPRSGLAARHGLSIVNT PGTIDAGYRGEIKVMLVNHDPREPIELRRGDRIAQLVVQRVERARFTEVGELPASVRGAGGYGSTGGF
Sequences:
>Translated_148_residues MTSDLEIPVQRLDPGLPLPAYAHPGDAGADLLTTVDVTLAPGERAMVPTGIALALPEGYAAFVHPRSGLAARHGLSIVNT PGTIDAGYRGEIKVMLVNHDPREPIELRRGDRIAQLVVQRVERARFTEVGELPASVRGAGGYGSTGGF >Mature_147_residues TSDLEIPVQRLDPGLPLPAYAHPGDAGADLLTTVDVTLAPGERAMVPTGIALALPEGYAAFVHPRSGLAARHGLSIVNTP GTIDAGYRGEIKVMLVNHDPREPIELRRGDRIAQLVVQRVERARFTEVGELPASVRGAGGYGSTGGF
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=142, Percent_Identity=40.8450704225352, Blast_Score=101, Evalue=2e-22, Organism=Homo sapiens, GI4503423, Length=142, Percent_Identity=40.8450704225352, Blast_Score=100, Evalue=4e-22, Organism=Homo sapiens, GI70906441, Length=142, Percent_Identity=40.8450704225352, Blast_Score=99, Evalue=2e-21, Organism=Escherichia coli, GI1790071, Length=148, Percent_Identity=38.5135135135135, Blast_Score=96, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71988561, Length=146, Percent_Identity=41.0958904109589, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6319729, Length=146, Percent_Identity=36.986301369863, Blast_Score=97, Evalue=1e-21, Organism=Drosophila melanogaster, GI19921126, Length=120, Percent_Identity=37.5, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI24583610, Length=120, Percent_Identity=37.5, Blast_Score=81, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 15587; Mature: 15456
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDLEIPVQRLDPGLPLPAYAHPGDAGADLLTTVDVTLAPGERAMVPTGIALALPEGYA CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCE AFVHPRSGLAARHGLSIVNTPGTIDAGYRGEIKVMLVNHDPREPIELRRGDRIAQLVVQR EEEECCCCCHHHCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHCCCCHHHHHHHHH VERARFTEVGELPASVRGAGGYGSTGGF HHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSDLEIPVQRLDPGLPLPAYAHPGDAGADLLTTVDVTLAPGERAMVPTGIALALPEGYA CCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCE AFVHPRSGLAARHGLSIVNTPGTIDAGYRGEIKVMLVNHDPREPIELRRGDRIAQLVVQR EEEECCCCCHHHCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHCCCCHHHHHHHHH VERARFTEVGELPASVRGAGGYGSTGGF HHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]