| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716919
Identifier: 119716919
GI number: 119716919
Start: 2860414
End: 2861682
Strand: Reverse
Name: 119716919
Synonym: Noca_2694
Alternate gene names: NA
Gene position: 2861682-2860414 (Counterclockwise)
Preceding gene: 119716920
Following gene: 119716917
Centisome position: 57.4
GC content: 69.66
Gene sequence:
>1269_bases ATGCGCCTCCGGACCACCCTCGCCGCCCTGGTCGCCCTCGCCGCATCGGTCGCCGCGACCCTCACTGCCGCGCCGGCGTC GGCCGACGACCTGCGCGGAGCGGCCGAGCGGCGTGGGGACGACGTACGCCGCGCCGTCTTCGTCGGCAACAACTGGGACG GCACCGCCGACATCCTCGACCCCGACACCTTCGAGCGGCTGGGCCGCATCGACATCGTCCCGGACCGGGACGAGCGGATC CAGGAGATCGCGACGAACCCGTACCGGTTCGCCAACTTCCTCGCCATCCGGGCGCTGATCGGTGAGGGACACGACCAGTA CGTCGACGACATGTACTCCTCGAACGACGGGCGGCTGCTGATCGTGTCGCGGCCGTCGTTCGCCGACGTCGTCGGGATCG ACCTGGCGACCAAGGAGATCGTCTGGCGCTTCCAGGTCGACGGCGTCCGCTCCGACCACATGGCGATCTCCCCGGACGGC CGGCGGGTGGTCGTGAGCGCCTCGACCGGCAACGTGGTGCACGTGCTGCGGGTCGCGGACGGCGTCGAGGTCGGCCGGTT CCCCTCCGGCGGGTCGCCGCACGAGAACATCTTCATCGACGGCGGGAAGCGGATCCTGCACGCCAGCATCGGGATGGTCT ACAGCCCGCTGGACGACCCGGCCCTCGACGCGACCAAGCAGGAGCGGGTGCTGCAGATCGTCGACGCGAAGACCATGCAG ATCGTGCGCCGTTACGACCTGCGCAAGGCCCTCGACGACCGTGGACTGACCAAGATGAGCACCGCCGTGCGTCCGATGAC GCTGTCACCGGACGACCGGACGTTCTACTTCCAGCTCTCGTTCTTCCACGGCTTCGTGGAGATGGACCGCGCCTCCGGGC GGATCACCCGGGTCAAGCACCTGCCGAACCTGGTCCCGGACATGCCGCGTGAGCAGTACCTGCTCGACTCGGCCCACCAC GGCATCGCGATGAACCCGTCCGGCACCAAGCTCTGTGTGGCCGGCACGATGTCCGACTACGCGACGGTCGTGAACGCGCA GACGTTCCGCCGCGGACCGCTGCTGAGGAAGCAGGACGGCAAGCCGTACTGGGTCACCCAGAGCTGGGACGGCCGGTCCT GCTACATCTCCTGGAGCGGCACCGACGAGGTCTCGAAGATCTCCTACCGGACCGGCCGGATCGTCCAGACCGTCCCCGTC GGCGACCACCCGCAGCGGGTCCGCAACGGCTGGGTGCGCGCCGACCTGGTGCCGGCGCCGTCCGCCTGA
Upstream 100 bases:
>100_bases GAAGGAGGTCCCGACCGGCGTATCGCGCCGCCGTCCGGACCGTCCGAGTAGGGGTCGGACTCACACGTAACCGACGCGGC GACGCCCTCGTTGCCCCGGC
Downstream 100 bases:
>100_bases CGCAACCAGGTCCGCCGCCGTGGCCCCAGAAGTCGTGCGGTTTGGTCACCAACGGCGGACAGGAGGCTCTTCATCTCGCC GTTGGTGACCAAACGACAAC
Product: serine/threonine protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MRLRTTLAALVALAASVAATLTAAPASADDLRGAAERRGDDVRRAVFVGNNWDGTADILDPDTFERLGRIDIVPDRDERI QEIATNPYRFANFLAIRALIGEGHDQYVDDMYSSNDGRLLIVSRPSFADVVGIDLATKEIVWRFQVDGVRSDHMAISPDG RRVVVSASTGNVVHVLRVADGVEVGRFPSGGSPHENIFIDGGKRILHASIGMVYSPLDDPALDATKQERVLQIVDAKTMQ IVRRYDLRKALDDRGLTKMSTAVRPMTLSPDDRTFYFQLSFFHGFVEMDRASGRITRVKHLPNLVPDMPREQYLLDSAHH GIAMNPSGTKLCVAGTMSDYATVVNAQTFRRGPLLRKQDGKPYWVTQSWDGRSCYISWSGTDEVSKISYRTGRIVQTVPV GDHPQRVRNGWVRADLVPAPSA
Sequences:
>Translated_422_residues MRLRTTLAALVALAASVAATLTAAPASADDLRGAAERRGDDVRRAVFVGNNWDGTADILDPDTFERLGRIDIVPDRDERI QEIATNPYRFANFLAIRALIGEGHDQYVDDMYSSNDGRLLIVSRPSFADVVGIDLATKEIVWRFQVDGVRSDHMAISPDG RRVVVSASTGNVVHVLRVADGVEVGRFPSGGSPHENIFIDGGKRILHASIGMVYSPLDDPALDATKQERVLQIVDAKTMQ IVRRYDLRKALDDRGLTKMSTAVRPMTLSPDDRTFYFQLSFFHGFVEMDRASGRITRVKHLPNLVPDMPREQYLLDSAHH GIAMNPSGTKLCVAGTMSDYATVVNAQTFRRGPLLRKQDGKPYWVTQSWDGRSCYISWSGTDEVSKISYRTGRIVQTVPV GDHPQRVRNGWVRADLVPAPSA >Mature_422_residues MRLRTTLAALVALAASVAATLTAAPASADDLRGAAERRGDDVRRAVFVGNNWDGTADILDPDTFERLGRIDIVPDRDERI QEIATNPYRFANFLAIRALIGEGHDQYVDDMYSSNDGRLLIVSRPSFADVVGIDLATKEIVWRFQVDGVRSDHMAISPDG RRVVVSASTGNVVHVLRVADGVEVGRFPSGGSPHENIFIDGGKRILHASIGMVYSPLDDPALDATKQERVLQIVDAKTMQ IVRRYDLRKALDDRGLTKMSTAVRPMTLSPDDRTFYFQLSFFHGFVEMDRASGRITRVKHLPNLVPDMPREQYLLDSAHH GIAMNPSGTKLCVAGTMSDYATVVNAQTFRRGPLLRKQDGKPYWVTQSWDGRSCYISWSGTDEVSKISYRTGRIVQTVPV GDHPQRVRNGWVRADLVPAPSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46717; Mature: 46717
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRTTLAALVALAASVAATLTAAPASADDLRGAAERRGDDVRRAVFVGNNWDGTADILD CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC PDTFERLGRIDIVPDRDERIQEIATNPYRFANFLAIRALIGEGHDQYVDDMYSSNDGRLL CHHHHHCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEE IVSRPSFADVVGIDLATKEIVWRFQVDGVRSDHMAISPDGRRVVVSASTGNVVHVLRVAD EEECCCCCCEEEEEEEEEEEEEEEEECCCCCCCEEECCCCCEEEEEECCCCEEEEEEECC GVEVGRFPSGGSPHENIFIDGGKRILHASIGMVYSPLDDPALDATKQERVLQIVDAKTMQ CCEECCCCCCCCCCCCEEECCCCEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHH IVRRYDLRKALDDRGLTKMSTAVRPMTLSPDDRTFYFQLSFFHGFVEMDRASGRITRVKH HHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCEEEEEEEEHHCHHHHHCCCCCEEEHHH LPNLVPDMPREQYLLDSAHHGIAMNPSGTKLCVAGTMSDYATVVNAQTFRRGPLLRKQDG CCCCCCCCCHHHHHHHCCCCCEEECCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCC KPYWVTQSWDGRSCYISWSGTDEVSKISYRTGRIVQTVPVGDHPQRVRNGWVRADLVPAP CCEEEEECCCCCEEEEEECCCCCHHHEEECCCCEEEEECCCCCHHHHHCCCEEEECCCCC SA CC >Mature Secondary Structure MRLRTTLAALVALAASVAATLTAAPASADDLRGAAERRGDDVRRAVFVGNNWDGTADILD CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC PDTFERLGRIDIVPDRDERIQEIATNPYRFANFLAIRALIGEGHDQYVDDMYSSNDGRLL CHHHHHCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEE IVSRPSFADVVGIDLATKEIVWRFQVDGVRSDHMAISPDGRRVVVSASTGNVVHVLRVAD EEECCCCCCEEEEEEEEEEEEEEEEECCCCCCCEEECCCCCEEEEEECCCCEEEEEEECC GVEVGRFPSGGSPHENIFIDGGKRILHASIGMVYSPLDDPALDATKQERVLQIVDAKTMQ CCEECCCCCCCCCCCCEEECCCCEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHH IVRRYDLRKALDDRGLTKMSTAVRPMTLSPDDRTFYFQLSFFHGFVEMDRASGRITRVKH HHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCEEEEEEEEHHCHHHHHCCCCCEEEHHH LPNLVPDMPREQYLLDSAHHGIAMNPSGTKLCVAGTMSDYATVVNAQTFRRGPLLRKQDG CCCCCCCCCHHHHHHHCCCCCEEECCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCC KPYWVTQSWDGRSCYISWSGTDEVSKISYRTGRIVQTVPVGDHPQRVRNGWVRADLVPAP CCEEEEECCCCCEEEEEECCCCCHHHEEECCCCEEEEECCCCCHHHHHCCCEEEECCCCC SA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA