Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119716809
Identifier: 119716809
GI number: 119716809
Start: 2748274
End: 2748939
Strand: Reverse
Name: 119716809
Synonym: Noca_2583
Alternate gene names: NA
Gene position: 2748939-2748274 (Counterclockwise)
Preceding gene: 119716810
Following gene: 119716808
Centisome position: 55.13
GC content: 74.32
Gene sequence:
>666_bases ATGACCCTGGTCAGCGCGCACCGCTGCCTCACCCACGCGGCGATCGAGGCCGCGATCGCGCTCGGGGCCGACTACGTCGA GTTCGACGTGCAGCGCATCGCCGACGGCTCACTCGTGCTGCTGCACGACCTGGTCGACGATCCGCCGGCGGGCACCCTGC GCTACGACGAGGCGCTCGCGCTGCTCGCCGGACGGGCCCGGGCCCACCTCGACCTCAAGCTGCGCGGCGGCGAGATCCCG ATCGTCACCGAGGCGATCGCGCGCCTCGGCACGGACCGGCTGCTGGTCACCACCCACCACGACGAGGCCGTGCGCGCGCT GCGCGCCTGGGCCGACCGCGAGGGCCACGACCTCCAGGTGGGGCTCTCGCTGGGGCAGGGGGTGAAGGGGTTCTCGCTCT GGCACGCGATCCGGGTGCGCGCGTCCGAGCTGTTCCCCGGAGTCCGCTACCGGGCTGCGGGCGCCAACGTGGTGGTCGCG CACCACTGGCTCGCCCGGCTCCGGGTGCGCCGCTTCGCCCGCCGACACCGGCTGCCGCTGGTCGTGTGGACGGTGGACAC CCCGCGCTCGCTGGCCCACTGGATGCGGCCGGGCCGCGCCTGGCTGGTCACCACGAACCAACCACAGGTCGCGCTCGACC TGCGGGCTGGAAGACTGCGCGCATGA
Upstream 100 bases:
>100_bases TGGCACCCCGAGACCGCCGCGGACGTCGGGCTGCTCGCGGGGCTGGTGCGCGCGGCTGCGACGTACGCCCAGGAGCGATG ACCCGCCCGATGAGCACCCG
Downstream 100 bases:
>100_bases CCAGTGGCGCCTTCGACGAGCTCCACCCCGACGTCCTGGGCGAGGCCTACCTGGCCGAGACCATCGGCCTGCCGCCGGAC GAGGAGGGCCCGGTCGTCGC
Product: glycerophosphoryl diester phosphodiesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MTLVSAHRCLTHAAIEAAIALGADYVEFDVQRIADGSLVLLHDLVDDPPAGTLRYDEALALLAGRARAHLDLKLRGGEIP IVTEAIARLGTDRLLVTTHHDEAVRALRAWADREGHDLQVGLSLGQGVKGFSLWHAIRVRASELFPGVRYRAAGANVVVA HHWLARLRVRRFARRHRLPLVVWTVDTPRSLAHWMRPGRAWLVTTNQPQVALDLRAGRLRA
Sequences:
>Translated_221_residues MTLVSAHRCLTHAAIEAAIALGADYVEFDVQRIADGSLVLLHDLVDDPPAGTLRYDEALALLAGRARAHLDLKLRGGEIP IVTEAIARLGTDRLLVTTHHDEAVRALRAWADREGHDLQVGLSLGQGVKGFSLWHAIRVRASELFPGVRYRAAGANVVVA HHWLARLRVRRFARRHRLPLVVWTVDTPRSLAHWMRPGRAWLVTTNQPQVALDLRAGRLRA >Mature_220_residues TLVSAHRCLTHAAIEAAIALGADYVEFDVQRIADGSLVLLHDLVDDPPAGTLRYDEALALLAGRARAHLDLKLRGGEIPI VTEAIARLGTDRLLVTTHHDEAVRALRAWADREGHDLQVGLSLGQGVKGFSLWHAIRVRASELFPGVRYRAAGANVVVAH HWLARLRVRRFARRHRLPLVVWTVDTPRSLAHWMRPGRAWLVTTNQPQVALDLRAGRLRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24533; Mature: 24402
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVSAHRCLTHAAIEAAIALGADYVEFDVQRIADGSLVLLHDLVDDPPAGTLRYDEALA CCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEHHHHHH LLAGRARAHLDLKLRGGEIPIVTEAIARLGTDRLLVTTHHDEAVRALRAWADREGHDLQV HHHCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE GLSLGQGVKGFSLWHAIRVRASELFPGVRYRAAGANVVVAHHWLARLRVRRFARRHRLPL EEECCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCE VVWTVDTPRSLAHWMRPGRAWLVTTNQPQVALDLRAGRLRA EEEECCCCHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCC >Mature Secondary Structure TLVSAHRCLTHAAIEAAIALGADYVEFDVQRIADGSLVLLHDLVDDPPAGTLRYDEALA CEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEHHHHHH LLAGRARAHLDLKLRGGEIPIVTEAIARLGTDRLLVTTHHDEAVRALRAWADREGHDLQV HHHCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE GLSLGQGVKGFSLWHAIRVRASELFPGVRYRAAGANVVVAHHWLARLRVRRFARRHRLPL EEECCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCE VVWTVDTPRSLAHWMRPGRAWLVTTNQPQVALDLRAGRLRA EEEECCCCHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA