Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119716795
Identifier: 119716795
GI number: 119716795
Start: 2737995
End: 2738330
Strand: Reverse
Name: 119716795
Synonym: Noca_2569
Alternate gene names: NA
Gene position: 2738330-2737995 (Counterclockwise)
Preceding gene: 119716800
Following gene: 119716794
Centisome position: 54.92
GC content: 69.94
Gene sequence:
>336_bases ATGGGCCGGGACCTTCGTCGACATCGCGACGAAGCCGTCCGCATCACCACGGCACCCGCCACCCGGCAGGAGGAGATCTC GGCGCGCCAGCGGCGCTACGTGTTCTCGATGGCGATCCGCACCCTCTGCTTCGTGGCGGCGATCGTCGTCGGACCCGGAT GGCTGCGCTGGGTGCTGGTCGCGGCGGCGGTCCTGCTGCCGTACGTCGCCGTGGTGATGGCCAACGCCACCGTTTCGAGA TCCGACGGGATCGAGCTGCTGGACAACGAGTACGGGCCCCACCAGCTCGGGCCGGCCACCGATTCCGAGGACGAACCCGG GGGCGGGGTGCTTTGA
Upstream 100 bases:
>100_bases CGAGGTGCCGACGATCTCGGTGACGCGGTAGGTGCGGTTGGTCATGGTTGCCTCCCGGTGCGGACGTAGGGGACCGAGCC TACCGACGTAGGCTGGCGGC
Downstream 100 bases:
>100_bases GAACCCGGCCACCCGTGACAGAATCGCCCGCGCAAGCCGAGTCTCCCCCGTCTCGGTTGGCAGCGGTGCCGGACGGCTTC CCCCGTGGCTGTCCGGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MGRDLRRHRDEAVRITTAPATRQEEISARQRRYVFSMAIRTLCFVAAIVVGPGWLRWVLVAAAVLLPYVAVVMANATVSR SDGIELLDNEYGPHQLGPATDSEDEPGGGVL
Sequences:
>Translated_111_residues MGRDLRRHRDEAVRITTAPATRQEEISARQRRYVFSMAIRTLCFVAAIVVGPGWLRWVLVAAAVLLPYVAVVMANATVSR SDGIELLDNEYGPHQLGPATDSEDEPGGGVL >Mature_110_residues GRDLRRHRDEAVRITTAPATRQEEISARQRRYVFSMAIRTLCFVAAIVVGPGWLRWVLVAAAVLLPYVAVVMANATVSRS DGIELLDNEYGPHQLGPATDSEDEPGGGVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12146; Mature: 12015
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRDLRRHRDEAVRITTAPATRQEEISARQRRYVFSMAIRTLCFVAAIVVGPGWLRWVLV CCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AAAVLLPYVAVVMANATVSRSDGIELLDNEYGPHQLGPATDSEDEPGGGVL HHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GRDLRRHRDEAVRITTAPATRQEEISARQRRYVFSMAIRTLCFVAAIVVGPGWLRWVLV CCHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AAAVLLPYVAVVMANATVSRSDGIELLDNEYGPHQLGPATDSEDEPGGGVL HHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA