Definition | Nocardioides sp. JS614 chromosome, complete genome. |
---|---|
Accession | NC_008699 |
Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119716763
Identifier: 119716763
GI number: 119716763
Start: 2704687
End: 2705598
Strand: Reverse
Name: 119716763
Synonym: Noca_2537
Alternate gene names: NA
Gene position: 2705598-2704687 (Counterclockwise)
Preceding gene: 119716764
Following gene: 119716762
Centisome position: 54.27
GC content: 73.68
Gene sequence:
>912_bases ATGATCGAGCTGACAAACACCAACTCGTCGGGCATCGCCGCGGAGTTCCTCCGGGCCCGCACCCGCGCCGGCAGCCCGGC GATGGGCATGGTGATGACGCTGGTGATCGTCGTCAACGAGGACCAGGCCGAGGGCGCCATGGCGGCCGCGCAGGCCGCCT CCCACGAGCACCCCGCCCGGGTCCTGGGGGTGATCCTCGGGGACGGCCGGGGCGCCGCACAGGTCAACGCCCAGGTGGGC ATCGGGTCCGGCTGGACCGGCGAGACCGCGCTGATCCGGCTCAAGGGCGAGGTCGTCAAGCACCCCGAGTCGGTGGTGCT GCCGCTGCTGCTGCCGGACTCCCCCGTCGCGATCTGGTGGCCGTGCCACCCGCCCGACGACCCCGCGGAGGACCCGCTCG GCCGGCTCGCCCAGCGCCGGATCACCGACGCGGCTGCGGCCACGCGAGCGCGGACCAAGGCGATCCGCCAGCAGTGCTCG ACGTACACGAAGGGCAACACCGACCTGGCCTGGACCCGGATCACGCCGTGGCGGGCACTGCTCGCCGCCGCCGTCGACCA GCAGCCGCTGAAGGTGACCGGCGCGTCGGTGACCGGTGAGCGGGTCAGCCCCAGCGCGGACCTGTTGGCCGCGTGGCTCT CGGACCGGCTGCACGTCGACGTCAGCCGCTCCAGCTCCGAGGGCCCGGGCATCACCGAGGTCGTGCTGGAGACCCGGGAG GGGCCGGTACGGATCACGCGCACGGACGGCAAGCTCGCCACGTTCTCCTCGCCCGGCCAGCCGGACCGCCCGGTCGCGCT GAAGCGCCGCGATCTCCCCGAGCTGCTCGCCGAGGAGCTGCGCCGCCTGGACGAGGACGACATCTACGCCGAGACCGCGC GGGCCCTCGTCACGATGGGTGATCGCGGATGA
Upstream 100 bases:
>100_bases AGCAGCACAAGAGCAGGCCCGAGCAGTACGAGTCCGGTGGCTGGGGCCCGGAGTCCGCGAATGCGATGCTCGCCCGCGAC GGACGGGTGTGGAGACGACC
Downstream 100 bases:
>100_bases GCGCCACGCCCCGGGTCGAGGTGCACCCCGACCGCGCTGCGTTGGCCACCGCCGTCGCGGGTGAGCTGCTCACCCGGCTC GCCGACGCGCAGGCGGCCGG
Product: oxppcycle protein
Products: NA
Alternate protein names: Oxppcycle Protein; Glucose-6-Phosphate Dehydrogenase Subunit; Oxppcycle Protein OpcA; OxPP Cycle Protein OpcA; Glucose-6-Phosphate Dehydrogenase Assembly Protein OpcA; Glucose-6-P Dehydrogenase Subunit; Glucose-6-P Dehydrogenase Subunit-Like Protein; Oxpp Cycle Protein OpcA; Glucose-6-Phosphate Dehydrogenase Opca Subunit; Gucose-6-Phosphate Dehydrogenase Assembly Protein OpcA; OXPP Cycle Protein OpcA; OxpP Cycle Protein OpcA; 6-Phosphogluconolactonase; Glucose 6-Phosphate Dehydrogenase Effector OpcA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MIELTNTNSSGIAAEFLRARTRAGSPAMGMVMTLVIVVNEDQAEGAMAAAQAASHEHPARVLGVILGDGRGAAQVNAQVG IGSGWTGETALIRLKGEVVKHPESVVLPLLLPDSPVAIWWPCHPPDDPAEDPLGRLAQRRITDAAAATRARTKAIRQQCS TYTKGNTDLAWTRITPWRALLAAAVDQQPLKVTGASVTGERVSPSADLLAAWLSDRLHVDVSRSSSEGPGITEVVLETRE GPVRITRTDGKLATFSSPGQPDRPVALKRRDLPELLAEELRRLDEDDIYAETARALVTMGDRG
Sequences:
>Translated_303_residues MIELTNTNSSGIAAEFLRARTRAGSPAMGMVMTLVIVVNEDQAEGAMAAAQAASHEHPARVLGVILGDGRGAAQVNAQVG IGSGWTGETALIRLKGEVVKHPESVVLPLLLPDSPVAIWWPCHPPDDPAEDPLGRLAQRRITDAAAATRARTKAIRQQCS TYTKGNTDLAWTRITPWRALLAAAVDQQPLKVTGASVTGERVSPSADLLAAWLSDRLHVDVSRSSSEGPGITEVVLETRE GPVRITRTDGKLATFSSPGQPDRPVALKRRDLPELLAEELRRLDEDDIYAETARALVTMGDRG >Mature_303_residues MIELTNTNSSGIAAEFLRARTRAGSPAMGMVMTLVIVVNEDQAEGAMAAAQAASHEHPARVLGVILGDGRGAAQVNAQVG IGSGWTGETALIRLKGEVVKHPESVVLPLLLPDSPVAIWWPCHPPDDPAEDPLGRLAQRRITDAAAATRARTKAIRQQCS TYTKGNTDLAWTRITPWRALLAAAVDQQPLKVTGASVTGERVSPSADLLAAWLSDRLHVDVSRSSSEGPGITEVVLETRE GPVRITRTDGKLATFSSPGQPDRPVALKRRDLPELLAEELRRLDEDDIYAETARALVTMGDRG
Specific function: Unknown
COG id: COG3429
COG function: function code G; Glucose-6-P dehydrogenase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32405; Mature: 32405
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELTNTNSSGIAAEFLRARTRAGSPAMGMVMTLVIVVNEDQAEGAMAAAQAASHEHPAR CEEEECCCCCCHHHHHHHHHHCCCCCHHHHEEEEEEEECCCCCCHHHHHHHHHCCCCCCE VLGVILGDGRGAAQVNAQVGIGSGWTGETALIRLKGEVVKHPESVVLPLLLPDSPVAIWW EEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEECHHHHCCCCEEEEEEECCCCEEEEE PCHPPDDPAEDPLGRLAQRRITDAAAATRARTKAIRQQCSTYTKGNTDLAWTRITPWRAL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHH LAAAVDQQPLKVTGASVTGERVSPSADLLAAWLSDRLHVDVSRSSSEGPGITEVVLETRE HHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCC GPVRITRTDGKLATFSSPGQPDRPVALKRRDLPELLAEELRRLDEDDIYAETARALVTMG CCEEEEECCCCEEECCCCCCCCCCCHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC DRG CCC >Mature Secondary Structure MIELTNTNSSGIAAEFLRARTRAGSPAMGMVMTLVIVVNEDQAEGAMAAAQAASHEHPAR CEEEECCCCCCHHHHHHHHHHCCCCCHHHHEEEEEEEECCCCCCHHHHHHHHHCCCCCCE VLGVILGDGRGAAQVNAQVGIGSGWTGETALIRLKGEVVKHPESVVLPLLLPDSPVAIWW EEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEECHHHHCCCCEEEEEEECCCCEEEEE PCHPPDDPAEDPLGRLAQRRITDAAAATRARTKAIRQQCSTYTKGNTDLAWTRITPWRAL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHH LAAAVDQQPLKVTGASVTGERVSPSADLLAAWLSDRLHVDVSRSSSEGPGITEVVLETRE HHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCC GPVRITRTDGKLATFSSPGQPDRPVALKRRDLPELLAEELRRLDEDDIYAETARALVTMG CCEEEEECCCCEEECCCCCCCCCCCHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCC DRG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA