Definition | Nocardioides sp. JS614 chromosome, complete genome. |
---|---|
Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is pgl [H]
Identifier: 119716762
GI number: 119716762
Start: 2703965
End: 2704690
Strand: Reverse
Name: pgl [H]
Synonym: Noca_2536
Alternate gene names: 119716762
Gene position: 2704690-2703965 (Counterclockwise)
Preceding gene: 119716763
Following gene: 119716761
Centisome position: 54.25
GC content: 75.21
Gene sequence:
>726_bases ATGAGCGCCACGCCCCGGGTCGAGGTGCACCCCGACCGCGCTGCGTTGGCCACCGCCGTCGCGGGTGAGCTGCTCACCCG GCTCGCCGACGCGCAGGCGGCCGGCGGGGTGCCCCAGATCGTCCTGACCGGCGGCACCATCGCCGAGGACATCCACCGCG AGTTGGCCCGCCTGTCGCCCGCCTCGGAGGTCGACTGGTCCCAGGTGGTCGTGTGGTGGGGTGACGAGCGGTTCGTCCCG CCCGACTCCCCCGACCGCAACGCCGGCCAGGCCCGTGCGGCCTTCCTCGACGCCGTCGGGGTCGACCCGGCGCGCGTGCA CGAGATGCCCTCGACCGCAGACGCGGCCGACGTCGAGGCCGGTGCAGCGTCGTACGCCGCCGTGCTGAGCGAGCACGCCG CCGACTTCGACGTGCTGATGCTCGGCATCGGGCCGGACGGCCACATCGCCTCACTGTTCCCGGGCTTCGCCCAGCTCGCC GTGACCGATCGGGCCGCGGTCGGCGTGACCGGGTCGCCGAAGCCGCCACCGGAGCGGATCAGCCTGACCTTCCCGGTGCT CAACCGGGCCCGCTCGGTCTGGTTCCTGGTCAGCGGTGACGGCAAGGCCGACGCCGTGGCCCGCGCCCTCGGTGGCGCCG ACGTCCGCGACGTCCCGGCCGCGGGCGTCACCGGCCACGACGAGACGATCTGGTTCCTCGACCGCCCCGCCGCCTCCCGC CTCTGA
Upstream 100 bases:
>100_bases GCGATCTCCCCGAGCTGCTCGCCGAGGAGCTGCGCCGCCTGGACGAGGACGACATCTACGCCGAGACCGCGCGGGCCCTC GTCACGATGGGTGATCGCGG
Downstream 100 bases:
>100_bases CGTCGAGTCGGCGCATCCTGCCCGCGCCCAGCGCCCGAGTCGGCGCATCTTGCCCGCGTTATCCACAGGTGGCGAACTCG CACGCCTACAGATCCTCGAT
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSATPRVEVHPDRAALATAVAGELLTRLADAQAAGGVPQIVLTGGTIAEDIHRELARLSPASEVDWSQVVVWWGDERFVP PDSPDRNAGQARAAFLDAVGVDPARVHEMPSTADAADVEAGAASYAAVLSEHAADFDVLMLGIGPDGHIASLFPGFAQLA VTDRAAVGVTGSPKPPPERISLTFPVLNRARSVWFLVSGDGKADAVARALGGADVRDVPAAGVTGHDETIWFLDRPAASR L
Sequences:
>Translated_241_residues MSATPRVEVHPDRAALATAVAGELLTRLADAQAAGGVPQIVLTGGTIAEDIHRELARLSPASEVDWSQVVVWWGDERFVP PDSPDRNAGQARAAFLDAVGVDPARVHEMPSTADAADVEAGAASYAAVLSEHAADFDVLMLGIGPDGHIASLFPGFAQLA VTDRAAVGVTGSPKPPPERISLTFPVLNRARSVWFLVSGDGKADAVARALGGADVRDVPAAGVTGHDETIWFLDRPAASR L >Mature_240_residues SATPRVEVHPDRAALATAVAGELLTRLADAQAAGGVPQIVLTGGTIAEDIHRELARLSPASEVDWSQVVVWWGDERFVPP DSPDRNAGQARAAFLDAVGVDPARVHEMPSTADAADVEAGAASYAAVLSEHAADFDVLMLGIGPDGHIASLFPGFAQLAV TDRAAVGVTGSPKPPPERISLTFPVLNRARSVWFLVSGDGKADAVARALGGADVRDVPAAGVTGHDETIWFLDRPAASRL
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI6912586, Length=242, Percent_Identity=35.5371900826446, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI52145310, Length=239, Percent_Identity=31.7991631799163, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI115533058, Length=246, Percent_Identity=32.520325203252, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI115533060, Length=243, Percent_Identity=32.9218106995885, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6321957, Length=247, Percent_Identity=28.7449392712551, Blast_Score=100, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6321687, Length=220, Percent_Identity=30.4545454545455, Blast_Score=95, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6324362, Length=178, Percent_Identity=32.5842696629214, Blast_Score=87, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6319918, Length=179, Percent_Identity=35.195530726257, Blast_Score=86, Evalue=6e-18, Organism=Drosophila melanogaster, GI24641119, Length=206, Percent_Identity=35.4368932038835, Blast_Score=110, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 25048; Mature: 24917
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00144 ASN_GLN_ASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATPRVEVHPDRAALATAVAGELLTRLADAQAAGGVPQIVLTGGTIAEDIHRELARLSP CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC ASEVDWSQVVVWWGDERFVPPDSPDRNAGQARAAFLDAVGVDPARVHEMPSTADAADVEA CCCCCCEEEEEEECCCEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHC GAASYAAVLSEHAADFDVLMLGIGPDGHIASLFPGFAQLAVTDRAAVGVTGSPKPPPERI CHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHCCCHHHHEECCCEEECCCCCCCCCCCCE SLTFPVLNRARSVWFLVSGDGKADAVARALGGADVRDVPAAGVTGHDETIWFLDRPAASR EEEHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHCC L C >Mature Secondary Structure SATPRVEVHPDRAALATAVAGELLTRLADAQAAGGVPQIVLTGGTIAEDIHRELARLSP CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC ASEVDWSQVVVWWGDERFVPPDSPDRNAGQARAAFLDAVGVDPARVHEMPSTADAADVEA CCCCCCEEEEEEECCCEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHC GAASYAAVLSEHAADFDVLMLGIGPDGHIASLFPGFAQLAVTDRAAVGVTGSPKPPPERI CHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHCCCHHHHEECCCEEECCCCCCCCCCCCE SLTFPVLNRARSVWFLVSGDGKADAVARALGGADVRDVPAAGVTGHDETIWFLDRPAASR EEEHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]