| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716508
Identifier: 119716508
GI number: 119716508
Start: 2430568
End: 2432910
Strand: Reverse
Name: 119716508
Synonym: Noca_2281
Alternate gene names: NA
Gene position: 2432910-2430568 (Counterclockwise)
Preceding gene: 119716509
Following gene: 119716507
Centisome position: 48.8
GC content: 65.51
Gene sequence:
>2343_bases ATGGACATCACCCCCTCACCACGCATCCTTCGGATGCTCGGCGAGATCGAGTTTGACGAGTGGCAGTGCATCGCCGAGCT CGTCGACAACGCCTTCGACGACTTCACAGACATCATCGAAGGCGGTCACTCCTGGCCCGGAGGCTACAAGGTCAGCGTGA CCCTCCCCGGGCCGGGCGCGAGCCTAGCTGGAGCCGAAGTGGTCGTAAAGGACACGGGCCGGGGCATGACCCGGACCACC CTCGAGCAGGCGGTGAAAGCCGGGTGGTCCAGCAACGACCGGTTCGACAAGCTCGGGCTGTTCGGCATGGGATTCAACGT GAGCACCGCTCGGCTCGGACGCCGCACGCGCGTCCTCACGACCCGCGAGGGCGACCCGGAGTGGATCGGTGTCGAAATCG ACCTCGACAAGCTCGGCCCCGACTTCGAGGCGCCAGACATCACCGAGCCCAAGGACGACCCGAGCGAGCACGGCACCAAG ATCATCGTCAGCAACCTGCATCTCGCTCGAGCCGAATGGCTCCAACGCAACGCCGAAAACCTCCGCACGACCCTGGGGCG GGTATACGGCTGGCTCCTGGACAACAAGCCGTACGAGCTATGGGTCCAAGGGGCCAAGGTCAAGCCTCGGAAGCTATGCC GCTGGGGCGACGACCGATTCATCATCTACGGCAGCGGGGCGAGCGCCGAGAAGATCCCGGCGTACATCGACATCGACCAG ACCTTCCAGCCCGCAGACGCCTGCGAGATATGTGGCAACTGGCAGAACCTTGGCAAGGAAACCTGCGACCAGTGCGGCAG TTCCCAACTCCGTCAGCGCGAACGGCGCCTGCACGGCTGGCTCGGAGTACAACGACACCTCGACAAGCGCGAGTTCGGGA TCGACTTCCTGCGCAACGGACGCAAGATCCTGCAGTACGACAAGCGTCTGTTCAACTGGACCAATCCGAACGACCCGACC GCTGGCGTGGACGTCGAGTACCCGATCGAACTGGTCAACCAGGGCGGACGGCTGATCGGTGAGATCCACCTCGACTACGT CCCGGTTCACTACGACAAGACGGCTTTCGAGTACAGCGACCGCGCTTGGAAGGCAGCTGTCGACTACTTGCGTGGAGAGG CCCCGCTTCAGCCTGAGAAGGCCAAGGCAGCCGGATACCCGGAGAACAACTCCCCCCTTGCCCGGCTCCACAAGGGATAT CGCAGGAACGCCGCCGGGCGCAGGTGTCTGGTCCCCGGCGACGGTAACCGACCGCTGCACGAGGAGACTCGACAGTGGGC GCGCAAGTTCTGGGCCGGCGACCCGGACTACCAGACAGACGAGAAGTGGTGGGCACAGGTCCTCATCCACGAGGAGCGCG TCGAGGCCGCTAAGTTGGCGAAAGCCACCGGCGACTCCAAGAACCAGGCCGATGAAGATGCGGTGATCGCCGCGCTGGGA GGAGAGGGCTCCACTTCTACCGAGGAACCTTCGACGACGGAGGAACCCACACCCGAACCCGAACCCACCGCGCCGGCCAA GCCTGAAACGGTCCAGGAGCGGCTCGCCCGATACGTGGGCTCCAGCGAGATCATGCCGGAACTGAGTCGCACATTCGGAC TACCCGACCTGGGACAGCTTCAGGTCGAGACGCGCACGCTCCATGAACACATCGCGGACGCCGACAACCACCCGACGCCG ATCTGGCTCGCGCTCGGGCCGGGAGGGACCGCCACGGCCCTCATCGACCTGACGCACGAGGCGTTCACCAAGCTCGGCCT CGAGCCCGCCGAACTGGTGGTGGCCGAAGTGAGTGCGGCACTCAAGGTGAAGGCCGACAGCCACCTGGCCCACTCGCAGA TCGCGGCTCGGCTGCGCGCGACCTGCTTGCCGGACACGGCCGTCGACCCCGCCGTCATCCGCGCGCAGGCCGCCGAGCTG CTGGCCGACATCCGACAGCGCATGGCGGACAACGTGAACTCGGACACTCAGCGGGCGTTGAGCTACCTCGACCCCGACGA GCAGACGCAGACCGAGAACGCCCTGATCGCCGACGGGGGCGACACACTCACCGCGTCGCTGGTGGGAAGCGGCCGGTTCC TGCTCTACGCCCCTCCCCTCTACCTGGTGAAACTGCTGGAGAACTGGCCGGAACCCTTCATGGAGGGCAACGTCTTCGCG GGTCCCTACACCTCCCTGACATCCCCCTCTTCGCGGCGTCTCAGCCTCGCGCGCGTGGTGGGCTACCTGAACGACGTCGC TACACTCCTCACCTTCCAGGCGTCACCGAGCGTCAGCCAGCTTCGCCGGACGCGGTTGAGCCTCCAACTCCTCCAGCAAG AACTCGCCCCGGAGGAGCAGTGA
Upstream 100 bases:
>100_bases TTCAGCGCGCTACGCGACGCATGGAAACGCGTCCACGCAGACAACCCACATGGGCCGACTGCGGCCCTGAGCCCCACGAC CTGAAAGGGCCACCGCACTC
Downstream 100 bases:
>100_bases GCGGGTTCCTTGCCCCTCGCGCCCTCCTCGCGGGCGGTCCACGAGGCCTTACCCTCGCAACCGAGCGGGCGCTTTGGCAC CTAGGTTTCACCGACGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 780; Mature: 780
Protein sequence:
>780_residues MDITPSPRILRMLGEIEFDEWQCIAELVDNAFDDFTDIIEGGHSWPGGYKVSVTLPGPGASLAGAEVVVKDTGRGMTRTT LEQAVKAGWSSNDRFDKLGLFGMGFNVSTARLGRRTRVLTTREGDPEWIGVEIDLDKLGPDFEAPDITEPKDDPSEHGTK IIVSNLHLARAEWLQRNAENLRTTLGRVYGWLLDNKPYELWVQGAKVKPRKLCRWGDDRFIIYGSGASAEKIPAYIDIDQ TFQPADACEICGNWQNLGKETCDQCGSSQLRQRERRLHGWLGVQRHLDKREFGIDFLRNGRKILQYDKRLFNWTNPNDPT AGVDVEYPIELVNQGGRLIGEIHLDYVPVHYDKTAFEYSDRAWKAAVDYLRGEAPLQPEKAKAAGYPENNSPLARLHKGY RRNAAGRRCLVPGDGNRPLHEETRQWARKFWAGDPDYQTDEKWWAQVLIHEERVEAAKLAKATGDSKNQADEDAVIAALG GEGSTSTEEPSTTEEPTPEPEPTAPAKPETVQERLARYVGSSEIMPELSRTFGLPDLGQLQVETRTLHEHIADADNHPTP IWLALGPGGTATALIDLTHEAFTKLGLEPAELVVAEVSAALKVKADSHLAHSQIAARLRATCLPDTAVDPAVIRAQAAEL LADIRQRMADNVNSDTQRALSYLDPDEQTQTENALIADGGDTLTASLVGSGRFLLYAPPLYLVKLLENWPEPFMEGNVFA GPYTSLTSPSSRRLSLARVVGYLNDVATLLTFQASPSVSQLRRTRLSLQLLQQELAPEEQ
Sequences:
>Translated_780_residues MDITPSPRILRMLGEIEFDEWQCIAELVDNAFDDFTDIIEGGHSWPGGYKVSVTLPGPGASLAGAEVVVKDTGRGMTRTT LEQAVKAGWSSNDRFDKLGLFGMGFNVSTARLGRRTRVLTTREGDPEWIGVEIDLDKLGPDFEAPDITEPKDDPSEHGTK IIVSNLHLARAEWLQRNAENLRTTLGRVYGWLLDNKPYELWVQGAKVKPRKLCRWGDDRFIIYGSGASAEKIPAYIDIDQ TFQPADACEICGNWQNLGKETCDQCGSSQLRQRERRLHGWLGVQRHLDKREFGIDFLRNGRKILQYDKRLFNWTNPNDPT AGVDVEYPIELVNQGGRLIGEIHLDYVPVHYDKTAFEYSDRAWKAAVDYLRGEAPLQPEKAKAAGYPENNSPLARLHKGY RRNAAGRRCLVPGDGNRPLHEETRQWARKFWAGDPDYQTDEKWWAQVLIHEERVEAAKLAKATGDSKNQADEDAVIAALG GEGSTSTEEPSTTEEPTPEPEPTAPAKPETVQERLARYVGSSEIMPELSRTFGLPDLGQLQVETRTLHEHIADADNHPTP IWLALGPGGTATALIDLTHEAFTKLGLEPAELVVAEVSAALKVKADSHLAHSQIAARLRATCLPDTAVDPAVIRAQAAEL LADIRQRMADNVNSDTQRALSYLDPDEQTQTENALIADGGDTLTASLVGSGRFLLYAPPLYLVKLLENWPEPFMEGNVFA GPYTSLTSPSSRRLSLARVVGYLNDVATLLTFQASPSVSQLRRTRLSLQLLQQELAPEEQ >Mature_780_residues MDITPSPRILRMLGEIEFDEWQCIAELVDNAFDDFTDIIEGGHSWPGGYKVSVTLPGPGASLAGAEVVVKDTGRGMTRTT LEQAVKAGWSSNDRFDKLGLFGMGFNVSTARLGRRTRVLTTREGDPEWIGVEIDLDKLGPDFEAPDITEPKDDPSEHGTK IIVSNLHLARAEWLQRNAENLRTTLGRVYGWLLDNKPYELWVQGAKVKPRKLCRWGDDRFIIYGSGASAEKIPAYIDIDQ TFQPADACEICGNWQNLGKETCDQCGSSQLRQRERRLHGWLGVQRHLDKREFGIDFLRNGRKILQYDKRLFNWTNPNDPT AGVDVEYPIELVNQGGRLIGEIHLDYVPVHYDKTAFEYSDRAWKAAVDYLRGEAPLQPEKAKAAGYPENNSPLARLHKGY RRNAAGRRCLVPGDGNRPLHEETRQWARKFWAGDPDYQTDEKWWAQVLIHEERVEAAKLAKATGDSKNQADEDAVIAALG GEGSTSTEEPSTTEEPTPEPEPTAPAKPETVQERLARYVGSSEIMPELSRTFGLPDLGQLQVETRTLHEHIADADNHPTP IWLALGPGGTATALIDLTHEAFTKLGLEPAELVVAEVSAALKVKADSHLAHSQIAARLRATCLPDTAVDPAVIRAQAAEL LADIRQRMADNVNSDTQRALSYLDPDEQTQTENALIADGGDTLTASLVGSGRFLLYAPPLYLVKLLENWPEPFMEGNVFA GPYTSLTSPSSRRLSLARVVGYLNDVATLLTFQASPSVSQLRRTRLSLQLLQQELAPEEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86547; Mature: 86547
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDITPSPRILRMLGEIEFDEWQCIAELVDNAFDDFTDIIEGGHSWPGGYKVSVTLPGPGA CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC SLAGAEVVVKDTGRGMTRTTLEQAVKAGWSSNDRFDKLGLFGMGFNVSTARLGRRTRVLT CCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHCEEEECCCCCHHHHHCCCEEEEE TREGDPEWIGVEIDLDKLGPDFEAPDITEPKDDPSEHGTKIIVSNLHLARAEWLQRNAEN ECCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCHHCCCEEEEECHHHHHHHHHHHHHHH LRTTLGRVYGWLLDNKPYELWVQGAKVKPRKLCRWGDDRFIIYGSGASAEKIPAYIDIDQ HHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCEEEEEECCCCCCCCCEEEECCC TFQPADACEICGNWQNLGKETCDQCGSSQLRQRERRLHGWLGVQRHLDKREFGIDFLRNG CCCCCHHHHHHCCHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHCC RKILQYDKRLFNWTNPNDPTAGVDVEYPIELVNQGGRLIGEIHLDYVPVHYDKTAFEYSD HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEEEEEEEECCHHHHHCH RAWKAAVDYLRGEAPLQPEKAKAAGYPENNSPLARLHKGYRRNAAGRRCLVPGDGNRPLH HHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCHH EETRQWARKFWAGDPDYQTDEKWWAQVLIHEERVEAAKLAKATGDSKNQADEDAVIAALG HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC GEGSTSTEEPSTTEEPTPEPEPTAPAKPETVQERLARYVGSSEIMPELSRTFGLPDLGQL CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCE QVETRTLHEHIADADNHPTPIWLALGPGGTATALIDLTHEAFTKLGLEPAELVVAEVSAA EHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHH LKVKADSHLAHSQIAARLRATCLPDTAVDPAVIRAQAAELLADIRQRMADNVNSDTQRAL EEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SYLDPDEQTQTENALIADGGDTLTASLVGSGRFLLYAPPLYLVKLLENWPEPFMEGNVFA HHCCCCCCCCCCCEEEECCCCEEEEEEECCCEEEEECCHHHHHHHHHHCCCHHHCCCCCC GPYTSLTSPSSRRLSLARVVGYLNDVATLLTFQASPSVSQLRRTRLSLQLLQQELAPEEQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDITPSPRILRMLGEIEFDEWQCIAELVDNAFDDFTDIIEGGHSWPGGYKVSVTLPGPGA CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC SLAGAEVVVKDTGRGMTRTTLEQAVKAGWSSNDRFDKLGLFGMGFNVSTARLGRRTRVLT CCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHCEEEECCCCCHHHHHCCCEEEEE TREGDPEWIGVEIDLDKLGPDFEAPDITEPKDDPSEHGTKIIVSNLHLARAEWLQRNAEN ECCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCHHCCCEEEEECHHHHHHHHHHHHHHH LRTTLGRVYGWLLDNKPYELWVQGAKVKPRKLCRWGDDRFIIYGSGASAEKIPAYIDIDQ HHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCEEEEEECCCCCCCCCEEEECCC TFQPADACEICGNWQNLGKETCDQCGSSQLRQRERRLHGWLGVQRHLDKREFGIDFLRNG CCCCCHHHHHHCCHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHCC RKILQYDKRLFNWTNPNDPTAGVDVEYPIELVNQGGRLIGEIHLDYVPVHYDKTAFEYSD HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEEEEEEEECCHHHHHCH RAWKAAVDYLRGEAPLQPEKAKAAGYPENNSPLARLHKGYRRNAAGRRCLVPGDGNRPLH HHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCHH EETRQWARKFWAGDPDYQTDEKWWAQVLIHEERVEAAKLAKATGDSKNQADEDAVIAALG HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC GEGSTSTEEPSTTEEPTPEPEPTAPAKPETVQERLARYVGSSEIMPELSRTFGLPDLGQL CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCE QVETRTLHEHIADADNHPTPIWLALGPGGTATALIDLTHEAFTKLGLEPAELVVAEVSAA EHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHH LKVKADSHLAHSQIAARLRATCLPDTAVDPAVIRAQAAELLADIRQRMADNVNSDTQRAL EEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SYLDPDEQTQTENALIADGGDTLTASLVGSGRFLLYAPPLYLVKLLENWPEPFMEGNVFA HHCCCCCCCCCCCEEEECCCCEEEEEEECCCEEEEECCHHHHHHHHHHCCCHHHCCCCCC GPYTSLTSPSSRRLSLARVVGYLNDVATLLTFQASPSVSQLRRTRLSLQLLQQELAPEEQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA