| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119716499
Identifier: 119716499
GI number: 119716499
Start: 2422685
End: 2422954
Strand: Reverse
Name: 119716499
Synonym: Noca_2272
Alternate gene names: NA
Gene position: 2422954-2422685 (Counterclockwise)
Preceding gene: 119716504
Following gene: 119716497
Centisome position: 48.6
GC content: 70.74
Gene sequence:
>270_bases GTGTCTACCCGTGTGGCGAGTCCGCTGTCGGCCCGCGCTTCTACACTTCGGCTCGTGCTCGCGATGACCGCTGCCCTCCA GGAGATTCCCCCTGACCACCGCGGCGGCTACGAGCTGGCGCGAGCCGATCTGTCGGCCACCGCGGCGTCCTACGACGAGG CGCTCGAGCGCATTCGGGAGCAGCTGCGGCCGGGCTGGCGCATTCCTCTCTCCGCGTCGACCGCGAGGGTCGATCCTCAG CTGGAGCGGTCCAGGCGCAGCCGGCGGTAA
Upstream 100 bases:
>100_bases CGAGCACTCCGATGAGCGCTCCACCATATGTATCGGCATTTCGGCGCCCCAAACCCCGATCACGCCTGCGAGGGAGTACT TCGACCGCCCGGCGACCCGG
Downstream 100 bases:
>100_bases CGGGTCAGGTGCCGCCACCGGCCGTGCTCAAACGCGGTGTCTGCCTCAACCTCGACGATCACCGTGGGGATCACCCGGGT GATCGCAACCGGCTCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSTRVASPLSARASTLRLVLAMTAALQEIPPDHRGGYELARADLSATAASYDEALERIREQLRPGWRIPLSASTARVDPQ LERSRRSRR
Sequences:
>Translated_89_residues MSTRVASPLSARASTLRLVLAMTAALQEIPPDHRGGYELARADLSATAASYDEALERIREQLRPGWRIPLSASTARVDPQ LERSRRSRR >Mature_88_residues STRVASPLSARASTLRLVLAMTAALQEIPPDHRGGYELARADLSATAASYDEALERIREQLRPGWRIPLSASTARVDPQL ERSRRSRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9899; Mature: 9768
Theoretical pI: Translated: 11.70; Mature: 11.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRVASPLSARASTLRLVLAMTAALQEIPPDHRGGYELARADLSATAASYDEALERIRE CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QLRPGWRIPLSASTARVDPQLERSRRSRR HHCCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure STRVASPLSARASTLRLVLAMTAALQEIPPDHRGGYELARADLSATAASYDEALERIRE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QLRPGWRIPLSASTARVDPQLERSRRSRR HHCCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA