| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is dnaG [H]
Identifier: 119716477
GI number: 119716477
Start: 2400492
End: 2406422
Strand: Reverse
Name: dnaG [H]
Synonym: Noca_2250
Alternate gene names: 119716477
Gene position: 2406422-2400492 (Counterclockwise)
Preceding gene: 119716480
Following gene: 119716463
Centisome position: 48.26
GC content: 72.6
Gene sequence:
>5931_bases ATGAGCCTCCACAAGCTGACGGCGGGGTCGGGGTACGACTACCTGACCCGCCAGGTCGCAGCGATGGACGCCACGGACAA GGGCCACACCGGCCTCGCGAGCTACTACACCGAGAAGGGCGAGACTCCCGGCGTGTGGGTCGGCTCCGGCATGGAGGGAC TCGAAGGGCTCGACGCCGGCGACATCGTCACCGCTGACCACATGCAGAGCCTGTTCGGCTCCGGTCACCACCCGCTGGCC ACCCAGCGGACCAAGGACCTGGACCTACGCATCGGCCGCGACGGCGTCGACCGGCCGACCTACGCGGACTACAAGACGGC CCGCCAGCTCGGCACGCCGTACAAGGTCTACGAGAACGACATCAGCCCGTTCCGGATCGAGGTCGCCAAGCGCATCGCGG CCCTCAACGAGGCCGCCGGCCTGCCGGGTGACTGGCCGGTCCCCGCGGCCGACCGGGCCAAGGTCCGCACCGAGGTCGGC ACCGAGTTCTTCCGTGCTGAGCACGGCCGTGAACCCGCCGACGCACGCGAGCTGGCCGCCGCGATCGCCAAGCACTCCCG ACCGAAGACCAACGCGGTGGCCGGCTACGACCTGACCTTCTCCCCGGTCAAGAGCGTCTCGGTGCTGTGGGCGATCTCCG ACCCGAAGACCGCCGCGGTGATCGAGCGGGCCCACCAGGCGGCGATCAAGGACGCGCTGGGCTTCATCGAATCCAAGGCA CTGTTCACCCGCCGAGGCACCAACGGCGTCCGCCAGGTTGACGTCCGCGGCCTGGTCGCCACGGCGTTCACCCACCGCGA CTCCCGCGCGGGAGACCCTGACTTGCATACGCACGTCGCCGTGGCGAACAAGGTCCAGACGCTCGACGGCAAGTGGCTGG CCATCGATGGCCGGCCGCTGCACAAGGCGGTGGTCTCGGCCTCGGAGACCTACAACACCGCGCTCGAGCGGCACCTGGTC GACGCCCTCGGCGTGCGGTTCGAGGAGCGGCCGAACGAGGACGCCCGCAAGCGGCCGGTGCGCGAGATCGTCGGCGTCGA CCCCGAGCTGAACCGCCGCTTCTCTAAGCGCCGCGCCAGCGTCGAGGACCGCCGCAAGGTCCTCGCGGCCGCGTTCCAGG CCACCCACGGCCGCCCGCCGACGCCGGTGGAGACCATCCAGCTGTCCCAGCAGGCGACGCTGGAGACCCGCGAGGCCAAG CACGAGCCGCGCTCGCTGGCCGAGCAGCGCGAGACCTGGAGCCGTGAGGCCATCGAGGTGCTGGGCACCCCTCAGCGGGT CGAGCATATGGTCCACGGCGCACTGAACCCGAAGGGCGCAGCGCGGTCGCTGGCCGACTCGGCCTGGTTCGCCAAGACGA CCGACCGGATCGTGGCGACGATGGAGGGAGCTCGGAGCACCTGGCAGTTCTGGCACGTCTACGCCGAGGCCCAGAGGCAG GTCCGGGGCGCCAACGTGCCCACCAACCAGGTCCCCCACGTCGTCGACCTGCTCGTAAGCGAGGTCCTCGACGGCCGCTC GGTGAGCATGGCCCGCGCCTGGGACGCCATCAGCGAACCGGTCGAGCTGCGGCGCGCGGACGGGACCTCGGTCTACACCC AGAGCGGCGCCGAGCTGTTCACCTCGGGCAAGGTACTCGCCGCCGAGCAGCGCCTGGTCGAGGTCGCCGGCCGGCACGAC GGGTACGCCGTCACGACCGACTCGGTCGACCTGGCGCTGCTCGAGTCGACCGCCAACGGCATCACCCTCAACGCCGGACA GGCAACGCTGGTCCGCGAGATGGCCACCTCCAGCGCCCGGCTACAGCTGGCGATCGCGCCCGCCGGATCCGGCAAGACCA CCGCGATGCGAGCCCTGGCCAGCGCCTGGGCTGATGGCGGCGGCACCATCATCGGCCTGGCTCCCTCAGCAGCGGCCGCG GACGCGCTGCGCTCCCAAATCGACACCCAGACCGACACCCTGGCCAAGCTGACCCACTCGCTCGAGCAGGCCCGCGAGTC CGGCGCCGCGATGCCCGCCTGGGTCGCCCGCATCGACTCCTCCACCCTCGTGGTCATCGACGAGGCCGGGATGGCCGACA CCCTCTCGCTGGACGCAGCGGTCTCCTACATCCTCGAGCGCGGCGGCAGCGTCCGACTGATCGGCGACGACCAGCAGCTC TCCGCGATCGGCGCCGGCGGCGTGCTGCGCGACATCCGCGCCACCCACGGGGCACTGCAGCTGACCGAGCTCGTCCGGTT CAAGGATCCCGCCGAGGGCGCCGCCTCGCTCGCGCTGCGCGAAGGCAAGCCCGAGTCGCTCGGCTTCTACCTCGACCGCG ACCGCGTCCACGTAGGCGACCTGGCCACCATGACCGAGGACGTCTTCGCGGCCTGGCAGGCCGACCGTGCCGCCGGCCTG GACTCGATCATGCTCGCCCCCACCCGCGACCTGGTCAGCGAGCTGAACCAGCAGGCCCGCGCCCACCGGCTCGAAGGAAT CGAGCCGGCCGACGTCGCCGCCAGCGGACCGGTCCGCCGGCTCGCCGACGGCAACGAGGCCTCGATCGGCGAACTGATCA TCACCCGCGAGAACGACCGTCGCCTGCGTACTTCGGCCACCGACTGGGTGAAGAACGGCGACCGCTGGAACGTGCTGGAG ATCCACGACGACGGCGACCTGACCGTCCAGCACACCCAGCACGGCCGCACCGTGCGGCTGCCCGCTGACTACGTCGCCCG ATCCTCCGAGCTCGGCTACGCGTGCACCGTGCACACCGCCCAGGGCGTCACCGCCGACACGATGCACGGCCTGGCCACCG GCAGCGAGTCGCGCCAGCAGCTCTACACGATGATGACCCGCGGCGTGCACGCGAACCACGTCTACCTCGAGGTCGTCGGC GACGGCGACCCGCACTCGGTGATCCACCCGACGCTGGTCCGGCCGCTCACGCCGACCGACATCCTCGAGTCGATGCTGGC GCGCGACAACATGCAGCGGTCCGCGACCAGCCTGCTGCGCGAGCAGGCCGATCCGGCCACCCGGCTCGGCGAGGCGGCAC AGCGCTACCTCGACAGCCTCTACGTCGCCGCGGAGGACTTCCTGCGCCATGACGACGTCGGCCAGGACGCCAACGGCGCC CCGACCAACGTGGTCGACGCCCTGGACAACGCGGTCGAAACGCTCGTCCCCGGGCTCTCGGAGGAGGCCGCCTGGCCAAC CTTGCGTGCCCATCTGCTGCTGCTCGGCGCGGCCGGCCAGAACCCCGTCGACGCGCTCCGGGCGGCCGCCGGCGACCGGG AGCTGGAGACCGCGCACGACCGCGCCGCGGTCCTCGACTGGCGCCTGGACGCCTCCGGCTTGCGCAACGCCGGCGCAGGG CCGCTGCCGTGGATGCCCGCGGTCCCGGCCCGCCTGGCTAAGGACCCGCACTGGGGCGCCTACCTCTCCCAGCGCGCTCA CCTGGTCGAGCAGCTCGCCGACCAGGTCCGAACGCGGGCGACCGACCAGGCCGCACTACCGGCGTGGGCACAGAACGGCC TCCGGCCCGAGGCCGCCACGGTCGCCAACGTCGAGGTCTGGCGGGCCGCCATGCAGGTCCTGGTCGACGACCGGCGACCG ACCGGTGCACCGCAGCTGCAGAAGGCCTCCGCGACCTGGCAGCGACGGCTCAACCGCGCCGTCACCGGCGACCACACCCC GGCGCTCAAGGAATGGCGCCAGCTGCTCTACTCGCTCGCCCCGCAGGTCCGCGACGACGAGTTCACCCCGCTGCTCGCCG AGCGACTCGCCGCGATGTCGCGCGCCGGCGTCACCGCCCACGAGCTGCTGCGCACCGCCACCGCGGCCGACCACCCGGCC GGGCCGCTGCCCGACGAGCACGCCGCGGCGGCCGTGTGGTGGCGCATGGCCCGTCAGCTCACCCCGGCCGTTGCCTCCCA GATCGGCGACGGTTCCCACGGTGAGAGCGTCACCACCGAGTGGACCCCGCGGCTCGCGGATCTGTTCGGTCCCGAGCGCG CCGCGAGCATCCAGGCCAGCACCTGGTGGCCCGCGCTCGTCGCGAACGTGGACCACGGCATGCAGCGCGGCTGGCAGGCC GAGGCTCTGCTGGGTGCCGGGCGGGCGATGCCGAGCGACGGCTGGGAGGGCGTCGACGAGTGCCAGGCGCTGGTCTGGCG GACCTCGATCGCGCTGGAGACCGCTCCCGACGAGCACGCGCACGAGTACCACTTCGACGAGCCGCCCGCAGACCTGTGGG ACGGGATCGAGCCGGACCCCGCGACGCTCGTCGACCACGCCACCGACCCCGACTGGGGCGACTGGCCGCTCGCCGAGGAC CCCGGCCCGTACGACGAGCACCTGGTCGACGTCGACGAGAACGCGGCCGACGAGCACGTGGTCGACGCCGTCGCTGGCGA CCTGGTCGACGTCGACGAGGACCAGTTCGTCGAGCCCGACCTGACGCTGGCCGCCTACATCCGCGACCTCGGCGGCAGCC GACTGGAGCCCACCGACGCCGACCTCCGGCTCATGTACCAGCGGGCTGACGAGTGGCACTCCTCCCCCGTCTCGCGTGAG CGCATGCTCGAGATCAACGACATGGCACAGGCCTTCTTCGAGGCCCGGTTCACCGACTCGTGGGGCCGCGACTACCTCAC CGGACGGTTCGGCATCGACCTCGCCGGCGACGAGCGGTTCCGTCCCGGTCAGGCGCCAGCCGGGTGGACCAACCTGGTCG ACCACCTGCGCGGCCGCGGTGTCAGTGACGCCGAGATGGTGGCCACCGGCGTCGCCATCGAGGCCAGCACCGGTCGCCTC ATCGACCGGTTCCGCGACCGGGTGATGTTCCCGGTGATCCACCAGGGCGAAGTGCTCGGCTTCGTCGGCCGCCGCCGGCC CGACCTCACCGACGCCGACAAGGGCGGCCCCAAGTACCTCAACACAGCCGACACCCCGCTGTTCCACAAGGGCGCCCAGC TATTCGGTGTCGTCGACGAGCTGCTCGCCGAGGGTGCGGTCCCAGTGATCGTCGAGGGCCCGATCGACGCCGTGGCGGTC ACGCTGGCCAGCGCCGGCCTCTACCTCGGCGTGGCGCCGCTCGGCACGTCGCTGACCGACGAGCAGGCCGCCCAGCTGGC TGCCGTCGGCCGCGACCCGATCGTGGCCACCGACGCCGACCTCGCTGGCCAGGTCGCGGCCGAGCGCGACTTCTGGATGC TCACCCCGCACGGCCTCGACCCCGGCTTCGCGCGGTTCCCCGACGGCCTCGACCCCGCCGACCTGCTCGCCCAGCGCGGG CCCGCTGCGCTCACTGCCGCGCTGGCCAGCGGCCAGCCCGCCTTCCGCTCGCTCGGTGACCAATTGCTCACCGAGCGCCT GGACAACCTCGCCCCGGAGCAGGCACAGATGGCCGCTATGCGGGTCATCTCGGCACGTCCCAGCCGCGCCTGGGAGCCGG GCGCCAACCAGGTCCGGGCCCGCCTGCAGCTCTCCCAGTTGCAGGCGCGACGCGACCTGCGCGACGCGATCAAGACCTGG GATGCCGACCCGCGGAAGGCGGCACTGGCCGAGCTCCACAAGAGCAGCGAGGTTCGCGCACGGCTCTCGGCCGCGGCCGA GAAGACCCCGGCCGAGCGGTGGGCCCCACTGGCTCGCGAACTCGACCCGCGGCTGCTCGAGCAGGGCGACTGGCCGGCCA CCGCCGCGATGCTGCAGCAGGCCCACGAGCAGGGTCACGACGTCGGCGCCGCCACGCGCGGCCTGGTCGCTGAGAAGCCC CTGGGCGACAGCCCGGCCCGTGACCTGCGCTACCGGATCGTGTCCCGCCTCGAGATCCCGATCGACACCGGCGAAGGCAC CCCGGCGCCGACCCAGTCGCAGGGCGTGGCACGAGATCGGCAGGACGTGAACCGTCCGCGGCCGCCCCGCCGCGGTACCC CACGCCGCTGA
Upstream 100 bases:
>100_bases ACCTCTTGCATTCTCGGTCTGCCGAATAGAAAGAACACAGCACGAATCTGGCCGGAAGTGATCGCACAGACCGCCCGCGC GCACGTAGGTGACCGTGACG
Downstream 100 bases:
>100_bases CCCCCTCCGGACGCCCGCACGCTGGCGTCACGGTAAGACCAGCTGCACGATCCTGTGGTCGCGGTGACAGCGGCCTCCGC AGCCGGTCTCGTCGATCAAC
Product: DNA primase catalytic core
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1976; Mature: 1975
Protein sequence:
>1976_residues MSLHKLTAGSGYDYLTRQVAAMDATDKGHTGLASYYTEKGETPGVWVGSGMEGLEGLDAGDIVTADHMQSLFGSGHHPLA TQRTKDLDLRIGRDGVDRPTYADYKTARQLGTPYKVYENDISPFRIEVAKRIAALNEAAGLPGDWPVPAADRAKVRTEVG TEFFRAEHGREPADARELAAAIAKHSRPKTNAVAGYDLTFSPVKSVSVLWAISDPKTAAVIERAHQAAIKDALGFIESKA LFTRRGTNGVRQVDVRGLVATAFTHRDSRAGDPDLHTHVAVANKVQTLDGKWLAIDGRPLHKAVVSASETYNTALERHLV DALGVRFEERPNEDARKRPVREIVGVDPELNRRFSKRRASVEDRRKVLAAAFQATHGRPPTPVETIQLSQQATLETREAK HEPRSLAEQRETWSREAIEVLGTPQRVEHMVHGALNPKGAARSLADSAWFAKTTDRIVATMEGARSTWQFWHVYAEAQRQ VRGANVPTNQVPHVVDLLVSEVLDGRSVSMARAWDAISEPVELRRADGTSVYTQSGAELFTSGKVLAAEQRLVEVAGRHD GYAVTTDSVDLALLESTANGITLNAGQATLVREMATSSARLQLAIAPAGSGKTTAMRALASAWADGGGTIIGLAPSAAAA DALRSQIDTQTDTLAKLTHSLEQARESGAAMPAWVARIDSSTLVVIDEAGMADTLSLDAAVSYILERGGSVRLIGDDQQL SAIGAGGVLRDIRATHGALQLTELVRFKDPAEGAASLALREGKPESLGFYLDRDRVHVGDLATMTEDVFAAWQADRAAGL DSIMLAPTRDLVSELNQQARAHRLEGIEPADVAASGPVRRLADGNEASIGELIITRENDRRLRTSATDWVKNGDRWNVLE IHDDGDLTVQHTQHGRTVRLPADYVARSSELGYACTVHTAQGVTADTMHGLATGSESRQQLYTMMTRGVHANHVYLEVVG DGDPHSVIHPTLVRPLTPTDILESMLARDNMQRSATSLLREQADPATRLGEAAQRYLDSLYVAAEDFLRHDDVGQDANGA PTNVVDALDNAVETLVPGLSEEAAWPTLRAHLLLLGAAGQNPVDALRAAAGDRELETAHDRAAVLDWRLDASGLRNAGAG PLPWMPAVPARLAKDPHWGAYLSQRAHLVEQLADQVRTRATDQAALPAWAQNGLRPEAATVANVEVWRAAMQVLVDDRRP TGAPQLQKASATWQRRLNRAVTGDHTPALKEWRQLLYSLAPQVRDDEFTPLLAERLAAMSRAGVTAHELLRTATAADHPA GPLPDEHAAAAVWWRMARQLTPAVASQIGDGSHGESVTTEWTPRLADLFGPERAASIQASTWWPALVANVDHGMQRGWQA EALLGAGRAMPSDGWEGVDECQALVWRTSIALETAPDEHAHEYHFDEPPADLWDGIEPDPATLVDHATDPDWGDWPLAED PGPYDEHLVDVDENAADEHVVDAVAGDLVDVDEDQFVEPDLTLAAYIRDLGGSRLEPTDADLRLMYQRADEWHSSPVSRE RMLEINDMAQAFFEARFTDSWGRDYLTGRFGIDLAGDERFRPGQAPAGWTNLVDHLRGRGVSDAEMVATGVAIEASTGRL IDRFRDRVMFPVIHQGEVLGFVGRRRPDLTDADKGGPKYLNTADTPLFHKGAQLFGVVDELLAEGAVPVIVEGPIDAVAV TLASAGLYLGVAPLGTSLTDEQAAQLAAVGRDPIVATDADLAGQVAAERDFWMLTPHGLDPGFARFPDGLDPADLLAQRG PAALTAALASGQPAFRSLGDQLLTERLDNLAPEQAQMAAMRVISARPSRAWEPGANQVRARLQLSQLQARRDLRDAIKTW DADPRKAALAELHKSSEVRARLSAAAEKTPAERWAPLARELDPRLLEQGDWPATAAMLQQAHEQGHDVGAATRGLVAEKP LGDSPARDLRYRIVSRLEIPIDTGEGTPAPTQSQGVARDRQDVNRPRPPRRGTPRR
Sequences:
>Translated_1976_residues MSLHKLTAGSGYDYLTRQVAAMDATDKGHTGLASYYTEKGETPGVWVGSGMEGLEGLDAGDIVTADHMQSLFGSGHHPLA TQRTKDLDLRIGRDGVDRPTYADYKTARQLGTPYKVYENDISPFRIEVAKRIAALNEAAGLPGDWPVPAADRAKVRTEVG TEFFRAEHGREPADARELAAAIAKHSRPKTNAVAGYDLTFSPVKSVSVLWAISDPKTAAVIERAHQAAIKDALGFIESKA LFTRRGTNGVRQVDVRGLVATAFTHRDSRAGDPDLHTHVAVANKVQTLDGKWLAIDGRPLHKAVVSASETYNTALERHLV DALGVRFEERPNEDARKRPVREIVGVDPELNRRFSKRRASVEDRRKVLAAAFQATHGRPPTPVETIQLSQQATLETREAK HEPRSLAEQRETWSREAIEVLGTPQRVEHMVHGALNPKGAARSLADSAWFAKTTDRIVATMEGARSTWQFWHVYAEAQRQ VRGANVPTNQVPHVVDLLVSEVLDGRSVSMARAWDAISEPVELRRADGTSVYTQSGAELFTSGKVLAAEQRLVEVAGRHD GYAVTTDSVDLALLESTANGITLNAGQATLVREMATSSARLQLAIAPAGSGKTTAMRALASAWADGGGTIIGLAPSAAAA DALRSQIDTQTDTLAKLTHSLEQARESGAAMPAWVARIDSSTLVVIDEAGMADTLSLDAAVSYILERGGSVRLIGDDQQL SAIGAGGVLRDIRATHGALQLTELVRFKDPAEGAASLALREGKPESLGFYLDRDRVHVGDLATMTEDVFAAWQADRAAGL DSIMLAPTRDLVSELNQQARAHRLEGIEPADVAASGPVRRLADGNEASIGELIITRENDRRLRTSATDWVKNGDRWNVLE IHDDGDLTVQHTQHGRTVRLPADYVARSSELGYACTVHTAQGVTADTMHGLATGSESRQQLYTMMTRGVHANHVYLEVVG DGDPHSVIHPTLVRPLTPTDILESMLARDNMQRSATSLLREQADPATRLGEAAQRYLDSLYVAAEDFLRHDDVGQDANGA PTNVVDALDNAVETLVPGLSEEAAWPTLRAHLLLLGAAGQNPVDALRAAAGDRELETAHDRAAVLDWRLDASGLRNAGAG PLPWMPAVPARLAKDPHWGAYLSQRAHLVEQLADQVRTRATDQAALPAWAQNGLRPEAATVANVEVWRAAMQVLVDDRRP TGAPQLQKASATWQRRLNRAVTGDHTPALKEWRQLLYSLAPQVRDDEFTPLLAERLAAMSRAGVTAHELLRTATAADHPA GPLPDEHAAAAVWWRMARQLTPAVASQIGDGSHGESVTTEWTPRLADLFGPERAASIQASTWWPALVANVDHGMQRGWQA EALLGAGRAMPSDGWEGVDECQALVWRTSIALETAPDEHAHEYHFDEPPADLWDGIEPDPATLVDHATDPDWGDWPLAED PGPYDEHLVDVDENAADEHVVDAVAGDLVDVDEDQFVEPDLTLAAYIRDLGGSRLEPTDADLRLMYQRADEWHSSPVSRE RMLEINDMAQAFFEARFTDSWGRDYLTGRFGIDLAGDERFRPGQAPAGWTNLVDHLRGRGVSDAEMVATGVAIEASTGRL IDRFRDRVMFPVIHQGEVLGFVGRRRPDLTDADKGGPKYLNTADTPLFHKGAQLFGVVDELLAEGAVPVIVEGPIDAVAV TLASAGLYLGVAPLGTSLTDEQAAQLAAVGRDPIVATDADLAGQVAAERDFWMLTPHGLDPGFARFPDGLDPADLLAQRG PAALTAALASGQPAFRSLGDQLLTERLDNLAPEQAQMAAMRVISARPSRAWEPGANQVRARLQLSQLQARRDLRDAIKTW DADPRKAALAELHKSSEVRARLSAAAEKTPAERWAPLARELDPRLLEQGDWPATAAMLQQAHEQGHDVGAATRGLVAEKP LGDSPARDLRYRIVSRLEIPIDTGEGTPAPTQSQGVARDRQDVNRPRPPRRGTPRR >Mature_1975_residues SLHKLTAGSGYDYLTRQVAAMDATDKGHTGLASYYTEKGETPGVWVGSGMEGLEGLDAGDIVTADHMQSLFGSGHHPLAT QRTKDLDLRIGRDGVDRPTYADYKTARQLGTPYKVYENDISPFRIEVAKRIAALNEAAGLPGDWPVPAADRAKVRTEVGT EFFRAEHGREPADARELAAAIAKHSRPKTNAVAGYDLTFSPVKSVSVLWAISDPKTAAVIERAHQAAIKDALGFIESKAL FTRRGTNGVRQVDVRGLVATAFTHRDSRAGDPDLHTHVAVANKVQTLDGKWLAIDGRPLHKAVVSASETYNTALERHLVD ALGVRFEERPNEDARKRPVREIVGVDPELNRRFSKRRASVEDRRKVLAAAFQATHGRPPTPVETIQLSQQATLETREAKH EPRSLAEQRETWSREAIEVLGTPQRVEHMVHGALNPKGAARSLADSAWFAKTTDRIVATMEGARSTWQFWHVYAEAQRQV RGANVPTNQVPHVVDLLVSEVLDGRSVSMARAWDAISEPVELRRADGTSVYTQSGAELFTSGKVLAAEQRLVEVAGRHDG YAVTTDSVDLALLESTANGITLNAGQATLVREMATSSARLQLAIAPAGSGKTTAMRALASAWADGGGTIIGLAPSAAAAD ALRSQIDTQTDTLAKLTHSLEQARESGAAMPAWVARIDSSTLVVIDEAGMADTLSLDAAVSYILERGGSVRLIGDDQQLS AIGAGGVLRDIRATHGALQLTELVRFKDPAEGAASLALREGKPESLGFYLDRDRVHVGDLATMTEDVFAAWQADRAAGLD SIMLAPTRDLVSELNQQARAHRLEGIEPADVAASGPVRRLADGNEASIGELIITRENDRRLRTSATDWVKNGDRWNVLEI HDDGDLTVQHTQHGRTVRLPADYVARSSELGYACTVHTAQGVTADTMHGLATGSESRQQLYTMMTRGVHANHVYLEVVGD GDPHSVIHPTLVRPLTPTDILESMLARDNMQRSATSLLREQADPATRLGEAAQRYLDSLYVAAEDFLRHDDVGQDANGAP TNVVDALDNAVETLVPGLSEEAAWPTLRAHLLLLGAAGQNPVDALRAAAGDRELETAHDRAAVLDWRLDASGLRNAGAGP LPWMPAVPARLAKDPHWGAYLSQRAHLVEQLADQVRTRATDQAALPAWAQNGLRPEAATVANVEVWRAAMQVLVDDRRPT GAPQLQKASATWQRRLNRAVTGDHTPALKEWRQLLYSLAPQVRDDEFTPLLAERLAAMSRAGVTAHELLRTATAADHPAG PLPDEHAAAAVWWRMARQLTPAVASQIGDGSHGESVTTEWTPRLADLFGPERAASIQASTWWPALVANVDHGMQRGWQAE ALLGAGRAMPSDGWEGVDECQALVWRTSIALETAPDEHAHEYHFDEPPADLWDGIEPDPATLVDHATDPDWGDWPLAEDP GPYDEHLVDVDENAADEHVVDAVAGDLVDVDEDQFVEPDLTLAAYIRDLGGSRLEPTDADLRLMYQRADEWHSSPVSRER MLEINDMAQAFFEARFTDSWGRDYLTGRFGIDLAGDERFRPGQAPAGWTNLVDHLRGRGVSDAEMVATGVAIEASTGRLI DRFRDRVMFPVIHQGEVLGFVGRRRPDLTDADKGGPKYLNTADTPLFHKGAQLFGVVDELLAEGAVPVIVEGPIDAVAVT LASAGLYLGVAPLGTSLTDEQAAQLAAVGRDPIVATDADLAGQVAAERDFWMLTPHGLDPGFARFPDGLDPADLLAQRGP AALTAALASGQPAFRSLGDQLLTERLDNLAPEQAQMAAMRVISARPSRAWEPGANQVRARLQLSQLQARRDLRDAIKTWD ADPRKAALAELHKSSEVRARLSAAAEKTPAERWAPLARELDPRLLEQGDWPATAAMLQQAHEQGHDVGAATRGLVAEKPL GDSPARDLRYRIVSRLEIPIDTGEGTPAPTQSQGVARDRQDVNRPRPPRRGTPRR
Specific function: DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments on both template strands at replication forks during chromosomal DNA synthesis [H]
COG id: COG0358
COG function: function code L; DNA primase (bacterial type)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Toprim domain [H]
Homologues:
Organism=Escherichia coli, GI1789447, Length=275, Percent_Identity=33.8181818181818, Blast_Score=120, Evalue=8e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013264 - InterPro: IPR019475 - InterPro: IPR006295 - InterPro: IPR006171 - InterPro: IPR002694 [H]
Pfam domain/function: PF10410 DnaB_bind; PF01751 Toprim; PF08275 Toprim_N; PF01807 zf-CHC2 [H]
EC number: 2.7.7.- [C]
Molecular weight: Translated: 214170; Mature: 214039
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHKLTAGSGYDYLTRQVAAMDATDKGHTGLASYYTEKGETPGVWVGSGMEGLEGLDAG CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCC DIVTADHMQSLFGSGHHPLATQRTKDLDLRIGRDGVDRPTYADYKTARQLGTPYKVYEND CEEEHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCEECCCC ISPFRIEVAKRIAALNEAAGLPGDWPVPAADRAKVRTEVGTEFFRAEHGREPADARELAA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AIAKHSRPKTNAVAGYDLTFSPVKSVSVLWAISDPKTAAVIERAHQAAIKDALGFIESKA HHHHCCCCCCCCEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH LFTRRGTNGVRQVDVRGLVATAFTHRDSRAGDPDLHTHVAVANKVQTLDGKWLAIDGRPL HHHCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEECCCCEEEECCCHH HKAVVSASETYNTALERHLVDALGVRFEERPNEDARKRPVREIVGVDPELNRRFSKRRAS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHCCCHHHHHHHHHHHCC VEDRRKVLAAAFQATHGRPPTPVETIQLSQQATLETREAKHEPRSLAEQRETWSREAIEV HHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LGTPQRVEHMVHGALNPKGAARSLADSAWFAKTTDRIVATMEGARSTWQFWHVYAEAQRQ HCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VRGANVPTNQVPHVVDLLVSEVLDGRSVSMARAWDAISEPVELRRADGTSVYTQSGAELF HCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCCEEEECCCHHHH TSGKVLAAEQRLVEVAGRHDGYAVTTDSVDLALLESTANGITLNAGQATLVREMATSSAR HCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCEEEECCHHHHHHHHHCCCCE LQLAIAPAGSGKTTAMRALASAWADGGGTIIGLAPSAAAADALRSQIDTQTDTLAKLTHS EEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHH LEQARESGAAMPAWVARIDSSTLVVIDEAGMADTLSLDAAVSYILERGGSVRLIGDDQQL HHHHHHCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHH SAIGAGGVLRDIRATHGALQLTELVRFKDPAEGAASLALREGKPESLGFYLDRDRVHVGD HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCEEECH LATMTEDVFAAWQADRAAGLDSIMLAPTRDLVSELNQQARAHRLEGIEPADVAASGPVRR HHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHH LADGNEASIGELIITRENDRRLRTSATDWVKNGDRWNVLEIHDDGDLTVQHTQHGRTVRL HCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCEEEC PADYVARSSELGYACTVHTAQGVTADTMHGLATGSESRQQLYTMMTRGVHANHVYLEVVG CHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEC DGDPHSVIHPTLVRPLTPTDILESMLARDNMQRSATSLLREQADPATRLGEAAQRYLDSL CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH YVAAEDFLRHDDVGQDANGAPTNVVDALDNAVETLVPGLSEEAAWPTLRAHLLLLGAAGQ HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHEEECCCC NPVDALRAAAGDRELETAHDRAAVLDWRLDASGLRNAGAGPLPWMPAVPARLAKDPHWGA CHHHHHHHHCCCCHHHHHHCCCEEEEEECCHHHCCCCCCCCCCCCCCCHHHHCCCCCHHH YLSQRAHLVEQLADQVRTRATDQAALPAWAQNGLRPEAATVANVEVWRAAMQVLVDDRRP HHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC TGAPQLQKASATWQRRLNRAVTGDHTPALKEWRQLLYSLAPQVRDDEFTPLLAERLAAMS CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH RAGVTAHELLRTATAADHPAGPLPDEHAAAAVWWRMARQLTPAVASQIGDGSHGESVTTE HCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC WTPRLADLFGPERAASIQASTWWPALVANVDHGMQRGWQAEALLGAGRAMPSDGWEGVDE CCHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHH CQALVWRTSIALETAPDEHAHEYHFDEPPADLWDGIEPDPATLVDHATDPDWGDWPLAED HHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCC PGPYDEHLVDVDENAADEHVVDAVAGDLVDVDEDQFVEPDLTLAAYIRDLGGSRLEPTDA CCCCHHHEEECCCCCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCH DLRLMYQRADEWHSSPVSRERMLEINDMAQAFFEARFTDSWGRDYLTGRFGIDLAGDERF HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCC RPGQAPAGWTNLVDHLRGRGVSDAEMVATGVAIEASTGRLIDRFRDRVMFPVIHQGEVLG CCCCCCCCHHHHHHHHHCCCCCHHHHHHHCEEEECCCHHHHHHHHHHCCCCEECCCCHHH FVGRRRPDLTDADKGGPKYLNTADTPLFHKGAQLFGVVDELLAEGAVPVIVEGPIDAVAV HHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHH TLASAGLYLGVAPLGTSLTDEQAAQLAAVGRDPIVATDADLAGQVAAERDFWMLTPHGLD HHHHCCHHEEECCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHHHHCCCCEEEECCCCCC PGFARFPDGLDPADLLAQRGPAALTAALASGQPAFRSLGDQLLTERLDNLAPEQAQMAAM CCHHHCCCCCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH RVISARPSRAWEPGANQVRARLQLSQLQARRDLRDAIKTWDADPRKAALAELHKSSEVRA HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RLSAAAEKTPAERWAPLARELDPRLLEQGDWPATAAMLQQAHEQGHDVGAATRGLVAEKP HHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCC LGDSPARDLRYRIVSRLEIPIDTGEGTPAPTQSQGVARDRQDVNRPRPPRRGTPRR CCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SLHKLTAGSGYDYLTRQVAAMDATDKGHTGLASYYTEKGETPGVWVGSGMEGLEGLDAG CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCC DIVTADHMQSLFGSGHHPLATQRTKDLDLRIGRDGVDRPTYADYKTARQLGTPYKVYEND CEEEHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCEECCCC ISPFRIEVAKRIAALNEAAGLPGDWPVPAADRAKVRTEVGTEFFRAEHGREPADARELAA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AIAKHSRPKTNAVAGYDLTFSPVKSVSVLWAISDPKTAAVIERAHQAAIKDALGFIESKA HHHHCCCCCCCCEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH LFTRRGTNGVRQVDVRGLVATAFTHRDSRAGDPDLHTHVAVANKVQTLDGKWLAIDGRPL HHHCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEECCCCEEEECCCHH HKAVVSASETYNTALERHLVDALGVRFEERPNEDARKRPVREIVGVDPELNRRFSKRRAS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHCCCHHHHHHHHHHHCC VEDRRKVLAAAFQATHGRPPTPVETIQLSQQATLETREAKHEPRSLAEQRETWSREAIEV HHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LGTPQRVEHMVHGALNPKGAARSLADSAWFAKTTDRIVATMEGARSTWQFWHVYAEAQRQ HCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VRGANVPTNQVPHVVDLLVSEVLDGRSVSMARAWDAISEPVELRRADGTSVYTQSGAELF HCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCCEEEECCCHHHH TSGKVLAAEQRLVEVAGRHDGYAVTTDSVDLALLESTANGITLNAGQATLVREMATSSAR HCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCEEEECCHHHHHHHHHCCCCE LQLAIAPAGSGKTTAMRALASAWADGGGTIIGLAPSAAAADALRSQIDTQTDTLAKLTHS EEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHH LEQARESGAAMPAWVARIDSSTLVVIDEAGMADTLSLDAAVSYILERGGSVRLIGDDQQL HHHHHHCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHH SAIGAGGVLRDIRATHGALQLTELVRFKDPAEGAASLALREGKPESLGFYLDRDRVHVGD HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCEEECH LATMTEDVFAAWQADRAAGLDSIMLAPTRDLVSELNQQARAHRLEGIEPADVAASGPVRR HHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHH LADGNEASIGELIITRENDRRLRTSATDWVKNGDRWNVLEIHDDGDLTVQHTQHGRTVRL HCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCEEEC PADYVARSSELGYACTVHTAQGVTADTMHGLATGSESRQQLYTMMTRGVHANHVYLEVVG CHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEC DGDPHSVIHPTLVRPLTPTDILESMLARDNMQRSATSLLREQADPATRLGEAAQRYLDSL CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH YVAAEDFLRHDDVGQDANGAPTNVVDALDNAVETLVPGLSEEAAWPTLRAHLLLLGAAGQ HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHEEECCCC NPVDALRAAAGDRELETAHDRAAVLDWRLDASGLRNAGAGPLPWMPAVPARLAKDPHWGA CHHHHHHHHCCCCHHHHHHCCCEEEEEECCHHHCCCCCCCCCCCCCCCHHHHCCCCCHHH YLSQRAHLVEQLADQVRTRATDQAALPAWAQNGLRPEAATVANVEVWRAAMQVLVDDRRP HHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC TGAPQLQKASATWQRRLNRAVTGDHTPALKEWRQLLYSLAPQVRDDEFTPLLAERLAAMS CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH RAGVTAHELLRTATAADHPAGPLPDEHAAAAVWWRMARQLTPAVASQIGDGSHGESVTTE HCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC WTPRLADLFGPERAASIQASTWWPALVANVDHGMQRGWQAEALLGAGRAMPSDGWEGVDE CCHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHH CQALVWRTSIALETAPDEHAHEYHFDEPPADLWDGIEPDPATLVDHATDPDWGDWPLAED HHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCC PGPYDEHLVDVDENAADEHVVDAVAGDLVDVDEDQFVEPDLTLAAYIRDLGGSRLEPTDA CCCCHHHEEECCCCCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCH DLRLMYQRADEWHSSPVSRERMLEINDMAQAFFEARFTDSWGRDYLTGRFGIDLAGDERF HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCC RPGQAPAGWTNLVDHLRGRGVSDAEMVATGVAIEASTGRLIDRFRDRVMFPVIHQGEVLG CCCCCCCCHHHHHHHHHCCCCCHHHHHHHCEEEECCCHHHHHHHHHHCCCCEECCCCHHH FVGRRRPDLTDADKGGPKYLNTADTPLFHKGAQLFGVVDELLAEGAVPVIVEGPIDAVAV HHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHH TLASAGLYLGVAPLGTSLTDEQAAQLAAVGRDPIVATDADLAGQVAAERDFWMLTPHGLD HHHHCCHHEEECCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHHHHCCCCEEEECCCCCC PGFARFPDGLDPADLLAQRGPAALTAALASGQPAFRSLGDQLLTERLDNLAPEQAQMAAM CCHHHCCCCCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH RVISARPSRAWEPGANQVRARLQLSQLQARRDLRDAIKTWDADPRKAALAELHKSSEVRA HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RLSAAAEKTPAERWAPLARELDPRLLEQGDWPATAAMLQQAHEQGHDVGAATRGLVAEKP HHHHHHHCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCC LGDSPARDLRYRIVSRLEIPIDTGEGTPAPTQSQGVARDRQDVNRPRPPRRGTPRR CCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Nucleotidyltransferases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961408; 11466286 [H]