| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716463
Identifier: 119716463
GI number: 119716463
Start: 2381634
End: 2382968
Strand: Reverse
Name: 119716463
Synonym: Noca_2235
Alternate gene names: NA
Gene position: 2382968-2381634 (Counterclockwise)
Preceding gene: 119716477
Following gene: 119716462
Centisome position: 47.79
GC content: 67.12
Gene sequence:
>1335_bases GTGGATTGGTGCCAGCGAGCCCGAGCGTCAGACTTTCGAATCTCCCTGCCCTCCTCACGACGGACGCCTGGATCCGATCG CGAGGAGGAGATGGCCATGGAAGTGATCCACGTCCGGTGTGCGGGCATGGACGTGTCGAAGAAGGACGCCAAGGTCTGCG TCCGACATGCGGGAGCAGGTCGGCGCAAGACCGTGGAAACGGTCACGACCTGGACCTCAATGACCGGCCAGATCCTGGCG CTGCGCGAGCATCTGATCGCCGAGCAGGTCACGTGTGTGGTGATGGAGGCAACCGGTGACTACTGGAAGCCGTTCTACTA CCTGCTCGAAGACCTGCCCGGTGTCGAGGTGATGCTGGTCAACGCCCGCCATGTCAAGACCCTGCCGGGACGCAAGAGCG ACGTCGCCGACGCGACCTGGCTGGCCCAGCTCGGTGCGCACGGCCTGGTCCGGGCCTCGTTCGTGCCACCCGAACCGATC CGGCAACTGCGGGACCTGACCCGGGCACGGACCGCGATCACCCGCGAACGTGGCCGGGAGGTCCAACGGCTGGAGAAGCT GCTGGAGGACGCCGGGATCAAGCTGTCCGCGGTCGCCTCCGACATCATGGGCGTCTCAGGACGGGCCATGCTCGAAGCGC TGATCGCCGGCGACCGCGATCCCGCCGGGCTTGCCGACCTGGCCAGGCGTCGACTGCGGTCCAAGATCCCTGAACTGACC GAAGCGCTCGCTGGCCGGTTCACCGAACACCACGCGTTCCTCGCCCGGGTCCACCTGGATCTCATCGACCGACACACCGC CGCCGTCGAGCAGTTGACTGAGCGGATCGAGGTGGTGATCGAGCCGTTTCAGGGCTTCCACGACCTGATCTGCACGATCC CGGGAATCTCCACGATCACCGCCGACATCATCACCGCCGAGACCGGCGCGGACATGACCCGGTTCCCCACTGCCAAGCAC CTCGCCTCTTGGGCCGGGACCACACCCGGCAGCAACGAGTCCGCCGGGAAGGTGAAGTCCTCACGGACCAGGCCCGGGAA CCCCTACCTGCAGGGCGCACTCGGGGCGGCCGCGATGGCGTGCTCACAGAACCGGACCACCTACCTCGGCGCGCGCTACC GGCGGATCGCCAGCCGGCGCGGCCCGCTGAAGGCCAACGTCGCGATCCAGCACTCCATGCTCATCGCGATCTGGCACATG GGCACCACCGGCACCCTCTACGACGACCCTGGAGGCGAGTTCTTCAACCGCCTCCACCCCGACCGCACCAAGATGCGAGC CATCAGCCAGCTCGAAGCCATGGGCTACCGCGTCACCCTCGACCACGCGAGCTGA
Upstream 100 bases:
>100_bases GGGGCGGATGCTGAGGGGTTCGTCGTGGTCGACCCCGGATACTCTGTGGTGCTTGCGAGCCTGTAGGTCAGCATGGTGGT GGAGGGCTTCCACGGGAACC
Downstream 100 bases:
>100_bases AGACCTCTGACGCGAAGGCCCACCCGCTGGGGTGAATCTTCGCGTCAGAGGACGTCCCCCCGAAAGGTGCAGAAACTTCT TGACCAGGGTGGTGCGGGGC
Product: transposase IS116/IS110/IS902 family protein
Products: NA
Alternate protein names: ISPpu9 Transposase; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Pyruvate Water Dikinase; Transposon; ISAfe3 Transposase; Phosphoenolpyruvate Synthase; Transposase For Insertion Sequences
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MDWCQRARASDFRISLPSSRRTPGSDREEEMAMEVIHVRCAGMDVSKKDAKVCVRHAGAGRRKTVETVTTWTSMTGQILA LREHLIAEQVTCVVMEATGDYWKPFYYLLEDLPGVEVMLVNARHVKTLPGRKSDVADATWLAQLGAHGLVRASFVPPEPI RQLRDLTRARTAITRERGREVQRLEKLLEDAGIKLSAVASDIMGVSGRAMLEALIAGDRDPAGLADLARRRLRSKIPELT EALAGRFTEHHAFLARVHLDLIDRHTAAVEQLTERIEVVIEPFQGFHDLICTIPGISTITADIITAETGADMTRFPTAKH LASWAGTTPGSNESAGKVKSSRTRPGNPYLQGALGAAAMACSQNRTTYLGARYRRIASRRGPLKANVAIQHSMLIAIWHM GTTGTLYDDPGGEFFNRLHPDRTKMRAISQLEAMGYRVTLDHAS
Sequences:
>Translated_444_residues MDWCQRARASDFRISLPSSRRTPGSDREEEMAMEVIHVRCAGMDVSKKDAKVCVRHAGAGRRKTVETVTTWTSMTGQILA LREHLIAEQVTCVVMEATGDYWKPFYYLLEDLPGVEVMLVNARHVKTLPGRKSDVADATWLAQLGAHGLVRASFVPPEPI RQLRDLTRARTAITRERGREVQRLEKLLEDAGIKLSAVASDIMGVSGRAMLEALIAGDRDPAGLADLARRRLRSKIPELT EALAGRFTEHHAFLARVHLDLIDRHTAAVEQLTERIEVVIEPFQGFHDLICTIPGISTITADIITAETGADMTRFPTAKH LASWAGTTPGSNESAGKVKSSRTRPGNPYLQGALGAAAMACSQNRTTYLGARYRRIASRRGPLKANVAIQHSMLIAIWHM GTTGTLYDDPGGEFFNRLHPDRTKMRAISQLEAMGYRVTLDHAS >Mature_444_residues MDWCQRARASDFRISLPSSRRTPGSDREEEMAMEVIHVRCAGMDVSKKDAKVCVRHAGAGRRKTVETVTTWTSMTGQILA LREHLIAEQVTCVVMEATGDYWKPFYYLLEDLPGVEVMLVNARHVKTLPGRKSDVADATWLAQLGAHGLVRASFVPPEPI RQLRDLTRARTAITRERGREVQRLEKLLEDAGIKLSAVASDIMGVSGRAMLEALIAGDRDPAGLADLARRRLRSKIPELT EALAGRFTEHHAFLARVHLDLIDRHTAAVEQLTERIEVVIEPFQGFHDLICTIPGISTITADIITAETGADMTRFPTAKH LASWAGTTPGSNESAGKVKSSRTRPGNPYLQGALGAAAMACSQNRTTYLGARYRRIASRRGPLKANVAIQHSMLIAIWHM GTTGTLYDDPGGEFFNRLHPDRTKMRAISQLEAMGYRVTLDHAS
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49021; Mature: 49021
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWCQRARASDFRISLPSSRRTPGSDREEEMAMEVIHVRCAGMDVSKKDAKVCVRHAGAG CCHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC RRKTVETVTTWTSMTGQILALREHLIAEQVTCVVMEATGDYWKPFYYLLEDLPGVEVMLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCEEEEE NARHVKTLPGRKSDVADATWLAQLGAHGLVRASFVPPEPIRQLRDLTRARTAITRERGRE CCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH VQRLEKLLEDAGIKLSAVASDIMGVSGRAMLEALIAGDRDPAGLADLARRRLRSKIPELT HHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH EALAGRFTEHHAFLARVHLDLIDRHTAAVEQLTERIEVVIEPFQGFHDLICTIPGISTIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ADIITAETGADMTRFPTAKHLASWAGTTPGSNESAGKVKSSRTRPGNPYLQGALGAAAMA HHHEEECCCCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH CSQNRTTYLGARYRRIASRRGPLKANVAIQHSMLIAIWHMGTTGTLYDDPGGEFFNRLHP HCCCCCHHHHHHHHHHHHCCCCCEECEEEHHHEEEEEEECCCCCCEEECCCHHHHHHCCC DRTKMRAISQLEAMGYRVTLDHAS CHHHHHHHHHHHHCCCEEEECCCC >Mature Secondary Structure MDWCQRARASDFRISLPSSRRTPGSDREEEMAMEVIHVRCAGMDVSKKDAKVCVRHAGAG CCHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC RRKTVETVTTWTSMTGQILALREHLIAEQVTCVVMEATGDYWKPFYYLLEDLPGVEVMLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCEEEEE NARHVKTLPGRKSDVADATWLAQLGAHGLVRASFVPPEPIRQLRDLTRARTAITRERGRE CCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH VQRLEKLLEDAGIKLSAVASDIMGVSGRAMLEALIAGDRDPAGLADLARRRLRSKIPELT HHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH EALAGRFTEHHAFLARVHLDLIDRHTAAVEQLTERIEVVIEPFQGFHDLICTIPGISTIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ADIITAETGADMTRFPTAKHLASWAGTTPGSNESAGKVKSSRTRPGNPYLQGALGAAAMA HHHEEECCCCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH CSQNRTTYLGARYRRIASRRGPLKANVAIQHSMLIAIWHMGTTGTLYDDPGGEFFNRLHP HCCCCCHHHHHHHHHHHHCCCCCEECEEEHHHEEEEEEECCCCCCEEECCCHHHHHHCCC DRTKMRAISQLEAMGYRVTLDHAS CHHHHHHHHHHHHCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA