| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715267
Identifier: 119715267
GI number: 119715267
Start: 1077424
End: 1078047
Strand: Reverse
Name: 119715267
Synonym: Noca_1026
Alternate gene names: NA
Gene position: 1078047-1077424 (Counterclockwise)
Preceding gene: 119715268
Following gene: 119715266
Centisome position: 21.62
GC content: 65.38
Gene sequence:
>624_bases ATGTCCCGTAACCGCAAGTTCCCAACCCAGATCCCCCGCTATCAGTCCACGTTCAGCGGCCGCGCCATCCACCTCATCGA CGCCGAAAACCTGCTCGGCGGCCCGAACGCAGCCCCCGAGGCCTTCATCGAGATGTGGCGCGTCTACCGAGGAGGCATCG TCTCCACAACGAGTGACCAGTTCGTTCTGGCGGGAAGCTCCTTCTTCTTCAGAAACGTCCTCCCGGCCCTCGCCGGTTTA GGCGCCCAGCTACTCGTCCGGGATGGCGAGGACGGCGCGGAACTCGCACTCCTAGATGGCCTAAATCTGACGCACGCGGC CGACCGGTTCGACCGCGTGGTCATCGCGAGCGGCGACGGCATGTTCGAGGACCTCGCGATCGAAGCTCGGCGTCGTGGGC TCCACGTTCACCAGGTCACCGGCCTGGGGCGGTGCTCCGCTGCTCTTTCCAGGGCTGCGACGACGCACGCGCAGCTGCAT CTCAACTTTATGGACGCCGAGCCGCACGCCGGTCTTCGGACCCTGGCTAAGCTCCGGGCCGCCGGCCGCGAGGCTCTCAT TCGTGGGATCGGACTAGATCCCACGCCTGAACGTCACCTCATGTTTGTCCGCGACGGTCGGTGA
Upstream 100 bases:
>100_bases CCGATCCTTCTCTGGAACCCGACTCGGGAATCCGAACGGGTGACTCGTTGGTCTATCGGGATCGGTTCCGTCAACGTCCA CCTCAACCGAAGGAGCCGAG
Downstream 100 bases:
>100_bases GACCTCTAGCCATGGCAGAATCCAGGCCAACTTTGACGCCGGACATCGAGGTCGAGAATGCTGCTGTGCAATGGCTCTAG GCCAAACTTGATGCGGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSRNRKFPTQIPRYQSTFSGRAIHLIDAENLLGGPNAAPEAFIEMWRVYRGGIVSTTSDQFVLAGSSFFFRNVLPALAGL GAQLLVRDGEDGAELALLDGLNLTHAADRFDRVVIASGDGMFEDLAIEARRRGLHVHQVTGLGRCSAALSRAATTHAQLH LNFMDAEPHAGLRTLAKLRAAGREALIRGIGLDPTPERHLMFVRDGR
Sequences:
>Translated_207_residues MSRNRKFPTQIPRYQSTFSGRAIHLIDAENLLGGPNAAPEAFIEMWRVYRGGIVSTTSDQFVLAGSSFFFRNVLPALAGL GAQLLVRDGEDGAELALLDGLNLTHAADRFDRVVIASGDGMFEDLAIEARRRGLHVHQVTGLGRCSAALSRAATTHAQLH LNFMDAEPHAGLRTLAKLRAAGREALIRGIGLDPTPERHLMFVRDGR >Mature_206_residues SRNRKFPTQIPRYQSTFSGRAIHLIDAENLLGGPNAAPEAFIEMWRVYRGGIVSTTSDQFVLAGSSFFFRNVLPALAGLG AQLLVRDGEDGAELALLDGLNLTHAADRFDRVVIASGDGMFEDLAIEARRRGLHVHQVTGLGRCSAALSRAATTHAQLHL NFMDAEPHAGLRTLAKLRAAGREALIRGIGLDPTPERHLMFVRDGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22552; Mature: 22421
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNRKFPTQIPRYQSTFSGRAIHLIDAENLLGGPNAAPEAFIEMWRVYRGGIVSTTSDQ CCCCCCCCCCCCCCHHCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCC FVLAGSSFFFRNVLPALAGLGAQLLVRDGEDGAELALLDGLNLTHAADRFDRVVIASGDG EEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHCEEEEECCCC MFEDLAIEARRRGLHVHQVTGLGRCSAALSRAATTHAQLHLNFMDAEPHAGLRTLAKLRA CHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCEEEEEEEEEECCCCCHHHHHHHHHHH AGREALIRGIGLDPTPERHLMFVRDGR CCHHHHHHCCCCCCCCCCEEEEEECCC >Mature Secondary Structure SRNRKFPTQIPRYQSTFSGRAIHLIDAENLLGGPNAAPEAFIEMWRVYRGGIVSTTSDQ CCCCCCCCCCCCCHHCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCC FVLAGSSFFFRNVLPALAGLGAQLLVRDGEDGAELALLDGLNLTHAADRFDRVVIASGDG EEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHCEEEEECCCC MFEDLAIEARRRGLHVHQVTGLGRCSAALSRAATTHAQLHLNFMDAEPHAGLRTLAKLRA CHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCEEEEEEEEEECCCCCHHHHHHHHHHH AGREALIRGIGLDPTPERHLMFVRDGR CCHHHHHHCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA