| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715246
Identifier: 119715246
GI number: 119715246
Start: 1053935
End: 1054954
Strand: Reverse
Name: 119715246
Synonym: Noca_1003
Alternate gene names: NA
Gene position: 1054954-1053935 (Counterclockwise)
Preceding gene: 119715250
Following gene: 119715242
Centisome position: 21.16
GC content: 73.63
Gene sequence:
>1020_bases ATGACGCGCAGCTCCACGGTCAGCACGGCGGAGGCGCTGGTCGCGCCCGGGAAAGGCATCCTCGCCGCCGACGAGAGCAC CCCGACGATCGCCAAGCGGCTCGCGGCGATCGGCGTCGAGTCGACCGAGCCGGTGCGCCGCGCCTACCGCGAGCTCCTGC TGACGGCGCCCGGCCTGTCCGAGCACATCAGCGGGGTCATCCTCTACGACGAGACGCTGCGCCAACGCACCGACGACGGG GTCCCGTTCGGCGAGCTGGTCGCCGGCGCCGGGATGATCCCGGGCATCAAGGTCGACGCCGGCACGGCCGACCTGGCCGG CTTCCCCAGCGAGGTGGTCACCGAGGGGCTCGACGGGTTGCGGCGGCGCTGCGCCGAGTACGTCGAGCTGGGTGCCCGGT TCGCCAAGTGGCGCGCGGTCATCAAGGTCGGTGAGGGCCGGCCGACGCGGACCTGCATCGAGGCGAACGCCCACGCACTG GGCCGCTACGCCGCGCTCGCGCAGGAGGCCGGTCTCGCGCCGATCGTCGAGCCCGAGGTCCTGATGGACGGGTCGCACAC CATCGACCGGTGCGCCGAGGTCACGGTCGCCGTGCTGTGGGCGGTCTACGACCAGCTGGCCGAGCAGCGGGTGCTGCTCG AGGGCACCCTCCTCAAGCCGAACATGGTGCTGCCGGGCGCGGAGTGCCCCGACCAGGTCGACGACGAGACGATCGCGACC CGGACCGTCACCGCGATGCGTGAGTCGGTGCCGGTCGCCGTACCCGGCATCGTGTTCCTCTCCGGCGGTCAGACGCACCA GCAGGCCACCGCCCGGCTCGACGCGATCAACCGGCACGGCTCCCAGCCCTGGCAGCTGAGCTTCTCCTTCGGCCGGGCGC TGCAGGCGCCGGTGCTCGAGGCGTGGGGCGGGGACGAGCGCAACCGGGACGCCGCCCAGGCCGCGCTGCTCGAACGTGCC GCGCTCAACGGCGCGGCGCGGTACGGCAGCTACCGCCCGGAGATGGAGCGGCCGCGCTGA
Upstream 100 bases:
>100_bases GCGCTCGCCCGGCAGTTGAGCCACCCTGGAGGGGACCGGGCGCTCAAGCCGACCCGCAGCGTCCGGCCGGCCCGGGCGGG CGGGCGAGGAGGCGGTGGCG
Downstream 100 bases:
>100_bases CCGGATCGGTCAGTCGTCCTCGTCGTCCTCCTTGTGGAGCAGGAACCGGCGACCGGTGACGATCGCGGGCGCCAGCTCGA CGTGGTCGTACTTGAACGAG
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MTRSSTVSTAEALVAPGKGILAADESTPTIAKRLAAIGVESTEPVRRAYRELLLTAPGLSEHISGVILYDETLRQRTDDG VPFGELVAGAGMIPGIKVDAGTADLAGFPSEVVTEGLDGLRRRCAEYVELGARFAKWRAVIKVGEGRPTRTCIEANAHAL GRYAALAQEAGLAPIVEPEVLMDGSHTIDRCAEVTVAVLWAVYDQLAEQRVLLEGTLLKPNMVLPGAECPDQVDDETIAT RTVTAMRESVPVAVPGIVFLSGGQTHQQATARLDAINRHGSQPWQLSFSFGRALQAPVLEAWGGDERNRDAAQAALLERA ALNGAARYGSYRPEMERPR
Sequences:
>Translated_339_residues MTRSSTVSTAEALVAPGKGILAADESTPTIAKRLAAIGVESTEPVRRAYRELLLTAPGLSEHISGVILYDETLRQRTDDG VPFGELVAGAGMIPGIKVDAGTADLAGFPSEVVTEGLDGLRRRCAEYVELGARFAKWRAVIKVGEGRPTRTCIEANAHAL GRYAALAQEAGLAPIVEPEVLMDGSHTIDRCAEVTVAVLWAVYDQLAEQRVLLEGTLLKPNMVLPGAECPDQVDDETIAT RTVTAMRESVPVAVPGIVFLSGGQTHQQATARLDAINRHGSQPWQLSFSFGRALQAPVLEAWGGDERNRDAAQAALLERA ALNGAARYGSYRPEMERPR >Mature_338_residues TRSSTVSTAEALVAPGKGILAADESTPTIAKRLAAIGVESTEPVRRAYRELLLTAPGLSEHISGVILYDETLRQRTDDGV PFGELVAGAGMIPGIKVDAGTADLAGFPSEVVTEGLDGLRRRCAEYVELGARFAKWRAVIKVGEGRPTRTCIEANAHALG RYAALAQEAGLAPIVEPEVLMDGSHTIDRCAEVTVAVLWAVYDQLAEQRVLLEGTLLKPNMVLPGAECPDQVDDETIATR TVTAMRESVPVAVPGIVFLSGGQTHQQATARLDAINRHGSQPWQLSFSFGRALQAPVLEAWGGDERNRDAAQAALLERAA LNGAARYGSYRPEMERPR
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Homo sapiens, GI34577112, Length=326, Percent_Identity=53.9877300613497, Blast_Score=341, Evalue=7e-94, Organism=Homo sapiens, GI34577110, Length=326, Percent_Identity=53.9877300613497, Blast_Score=341, Evalue=7e-94, Organism=Homo sapiens, GI4557305, Length=326, Percent_Identity=53.9877300613497, Blast_Score=341, Evalue=7e-94, Organism=Homo sapiens, GI193794814, Length=326, Percent_Identity=53.9877300613497, Blast_Score=341, Evalue=7e-94, Organism=Homo sapiens, GI4885063, Length=321, Percent_Identity=52.9595015576324, Blast_Score=330, Evalue=1e-90, Organism=Homo sapiens, GI40354205, Length=324, Percent_Identity=49.3827160493827, Blast_Score=311, Evalue=7e-85, Organism=Caenorhabditis elegans, GI71983985, Length=320, Percent_Identity=53.4375, Blast_Score=331, Evalue=3e-91, Organism=Caenorhabditis elegans, GI25150450, Length=330, Percent_Identity=52.4242424242424, Blast_Score=326, Evalue=1e-89, Organism=Caenorhabditis elegans, GI71983990, Length=226, Percent_Identity=51.3274336283186, Blast_Score=228, Evalue=2e-60, Organism=Drosophila melanogaster, GI24650282, Length=324, Percent_Identity=54.6296296296296, Blast_Score=334, Evalue=6e-92, Organism=Drosophila melanogaster, GI24650280, Length=324, Percent_Identity=54.6296296296296, Blast_Score=334, Evalue=6e-92, Organism=Drosophila melanogaster, GI24650278, Length=324, Percent_Identity=54.6296296296296, Blast_Score=334, Evalue=6e-92, Organism=Drosophila melanogaster, GI221459619, Length=324, Percent_Identity=54.6296296296296, Blast_Score=333, Evalue=8e-92, Organism=Drosophila melanogaster, GI24650288, Length=324, Percent_Identity=54.6296296296296, Blast_Score=333, Evalue=8e-92, Organism=Drosophila melanogaster, GI45553577, Length=326, Percent_Identity=54.2944785276074, Blast_Score=332, Evalue=2e-91, Organism=Drosophila melanogaster, GI24650304, Length=327, Percent_Identity=46.7889908256881, Blast_Score=305, Evalue=3e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 36259; Mature: 36127
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00158 ALDOLASE_CLASS_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSSTVSTAEALVAPGKGILAADESTPTIAKRLAAIGVESTEPVRRAYRELLLTAPGLS CCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH EHISGVILYDETLRQRTDDGVPFGELVAGAGMIPGIKVDAGTADLAGFPSEVVTEGLDGL HHHCEEEEECHHHHHCCCCCCCHHHHHHCCCCCCCEEECCCCCHHCCCCHHHHHHHHHHH RRRCAEYVELGARFAKWRAVIKVGEGRPTRTCIEANAHALGRYAALAQEAGLAPIVEPEV HHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHH LMDGSHTIDRCAEVTVAVLWAVYDQLAEQRVLLEGTLLKPNMVLPGAECPDQVDDETIAT EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEECCCCCCCCCCCCHHHHH RTVTAMRESVPVAVPGIVFLSGGQTHQQATARLDAINRHGSQPWQLSFSFGRALQAPVLE HHHHHHHHCCCEEECCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEHHCCHHHCCHHH AWGGDERNRDAAQAALLERAALNGAARYGSYRPEMERPR HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TRSSTVSTAEALVAPGKGILAADESTPTIAKRLAAIGVESTEPVRRAYRELLLTAPGLS CCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH EHISGVILYDETLRQRTDDGVPFGELVAGAGMIPGIKVDAGTADLAGFPSEVVTEGLDGL HHHCEEEEECHHHHHCCCCCCCHHHHHHCCCCCCCEEECCCCCHHCCCCHHHHHHHHHHH RRRCAEYVELGARFAKWRAVIKVGEGRPTRTCIEANAHALGRYAALAQEAGLAPIVEPEV HHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHH LMDGSHTIDRCAEVTVAVLWAVYDQLAEQRVLLEGTLLKPNMVLPGAECPDQVDDETIAT EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEECCCCCCCCCCCCHHHHH RTVTAMRESVPVAVPGIVFLSGGQTHQQATARLDAINRHGSQPWQLSFSFGRALQAPVLE HHHHHHHHCCCEEECCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEHHCCHHHCCHHH AWGGDERNRDAAQAALLERAALNGAARYGSYRPEMERPR HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]