| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715242
Identifier: 119715242
GI number: 119715242
Start: 1050421
End: 1050828
Strand: Reverse
Name: 119715242
Synonym: Noca_0999
Alternate gene names: NA
Gene position: 1050828-1050421 (Counterclockwise)
Preceding gene: 119715246
Following gene: 119715238
Centisome position: 21.08
GC content: 71.81
Gene sequence:
>408_bases ATGGACAGGACGGACCGTGGACAGCTCGTGGACCTGCCGGTCGAGGAGTGCTGGCAGCTGCTCACGACGGCGCCGGTGGG CCGGATCGCCTGGTCGACCACCGGAGGCCCGGTGGTCGTGCCGGTGAACTTCGTGGTCGACGGCCGGACCATCAAGATCC GCACGGCGGCGTACTCCGCGATGGTGCAGAAGGCCGACGTGGAGCGGGTCGCGTTCCAGGTCGACCGGATCGACGAGGCC ACGCACACCGGCTGGAGCGTGCTCGCGCGCGGCCGTGCCGAGGTGCGGTACGGCGAGCGCGAGGACGAGGCCGGACCTCA GCCGTGGCCGCGGGGGCCCCGGTCGGCGACCGTCGTCATCGACGTCGACGAGATCACCGGTCGCTGGCTGAACCCCAGCG AGCACTGA
Upstream 100 bases:
>100_bases GCACGGGAGAGACGTAGGTCCTCCGCCCAGGGGCCGTGGTACCCGCGGCCGGCTGGACGGGTCGGGTTTACTCGGTACCG GGCACGACGGAGGAGGAGTC
Downstream 100 bases:
>100_bases ACCGCTGCCACAACCCGAGCACGAGACCCGGTGCGGCGCTGAGCGCCAGCACGAGCAGCGCGTCGGCCGCGGGCACCGTG TCGGTGCGCAGCAGGTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MDRTDRGQLVDLPVEECWQLLTTAPVGRIAWSTTGGPVVVPVNFVVDGRTIKIRTAAYSAMVQKADVERVAFQVDRIDEA THTGWSVLARGRAEVRYGEREDEAGPQPWPRGPRSATVVIDVDEITGRWLNPSEH
Sequences:
>Translated_135_residues MDRTDRGQLVDLPVEECWQLLTTAPVGRIAWSTTGGPVVVPVNFVVDGRTIKIRTAAYSAMVQKADVERVAFQVDRIDEA THTGWSVLARGRAEVRYGEREDEAGPQPWPRGPRSATVVIDVDEITGRWLNPSEH >Mature_135_residues MDRTDRGQLVDLPVEECWQLLTTAPVGRIAWSTTGGPVVVPVNFVVDGRTIKIRTAAYSAMVQKADVERVAFQVDRIDEA THTGWSVLARGRAEVRYGEREDEAGPQPWPRGPRSATVVIDVDEITGRWLNPSEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15008; Mature: 15008
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRTDRGQLVDLPVEECWQLLTTAPVGRIAWSTTGGPVVVPVNFVVDGRTIKIRTAAYSA CCCCCCCCEEECCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEEECCEEEEEEHHHHHH MVQKADVERVAFQVDRIDEATHTGWSVLARGRAEVRYGEREDEAGPQPWPRGPRSATVVI HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEEEE DVDEITGRWLNPSEH EEHHHCCCCCCCCCC >Mature Secondary Structure MDRTDRGQLVDLPVEECWQLLTTAPVGRIAWSTTGGPVVVPVNFVVDGRTIKIRTAAYSA CCCCCCCCEEECCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEEECCEEEEEEHHHHHH MVQKADVERVAFQVDRIDEATHTGWSVLARGRAEVRYGEREDEAGPQPWPRGPRSATVVI HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEEEE DVDEITGRWLNPSEH EEHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA