| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715245
Identifier: 119715245
GI number: 119715245
Start: 1053491
End: 1053925
Strand: Direct
Name: 119715245
Synonym: Noca_1002
Alternate gene names: NA
Gene position: 1053491-1053925 (Clockwise)
Preceding gene: 119715244
Following gene: 119715247
Centisome position: 21.13
GC content: 66.9
Gene sequence:
>435_bases ATGACACAACAGCAGCTCACCGAGGATCAGCCGATGGTGGAGCTCACCGTCGAGGAGTGCTGGGACCTGCTCTCGCAGAC CGAGGTGGGCCGCCTGGCCTACCGCCTGGTCGACGAGATCCACCTGATACCGATCAACTACGCGGTCGAGGGGCGCACGA TCCTGTTCCGCACGGCCGAGGGCAACAAGCTGCTGGCCGCCGAGATGCACTCGGAGGTCGCCTTCGAGATCGACTGGGTC GGCGACGACTCCGCCTGGTCGGTCATGGTGCGCGGCCACCTGCGCCACCTCGACGAGGGCGAGCAGCACCGGCTCTCCGG GCTGCGGATCCACCCGTGGATCCACTCGTTCAAGTACGACCACGTCGAGCTGGCGCCCGCGATCGTCACCGGTCGCCGGT TCCTGCTCCACAAGGAGGACGACGAGGACGACTGA
Upstream 100 bases:
>100_bases GAGTCCGAGGGACCTTGGGCCCTGACCCCGAGACGAGCAGTGGGGGTTCCCTTGACCCACGACCCACACGACGACCCGCA CGACGGGCGGAGGCGACACG
Downstream 100 bases:
>100_bases CCGATCCGGTCAGCGCGGCCGCTCCATCTCCGGGCGGTAGCTGCCGTACCGCGCCGCGCCGTTGAGCGCGGCACGTTCGA GCAGCGCGGCCTGGGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTQQQLTEDQPMVELTVEECWDLLSQTEVGRLAYRLVDEIHLIPINYAVEGRTILFRTAEGNKLLAAEMHSEVAFEIDWV GDDSAWSVMVRGHLRHLDEGEQHRLSGLRIHPWIHSFKYDHVELAPAIVTGRRFLLHKEDDEDD
Sequences:
>Translated_144_residues MTQQQLTEDQPMVELTVEECWDLLSQTEVGRLAYRLVDEIHLIPINYAVEGRTILFRTAEGNKLLAAEMHSEVAFEIDWV GDDSAWSVMVRGHLRHLDEGEQHRLSGLRIHPWIHSFKYDHVELAPAIVTGRRFLLHKEDDEDD >Mature_143_residues TQQQLTEDQPMVELTVEECWDLLSQTEVGRLAYRLVDEIHLIPINYAVEGRTILFRTAEGNKLLAAEMHSEVAFEIDWVG DDSAWSVMVRGHLRHLDEGEQHRLSGLRIHPWIHSFKYDHVELAPAIVTGRRFLLHKEDDEDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16728; Mature: 16597
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQQLTEDQPMVELTVEECWDLLSQTEVGRLAYRLVDEIHLIPINYAVEGRTILFRTAE CCCCCCCCCCCEEEEEHHHHHHHHHHCHHHHHHHHHHHCEEEEEEEEEECCCEEEEEECC GNKLLAAEMHSEVAFEIDWVGDDSAWSVMVRGHLRHLDEGEQHRLSGLRIHPWIHSFKYD CCEEEEEECCCCEEEEEEECCCCCCEEEEEEHHHHCCCCCCCHHHCCEEECCHHHCCCCC HVELAPAIVTGRRFLLHKEDDEDD CEEECCEEECCCEEEEECCCCCCC >Mature Secondary Structure TQQQLTEDQPMVELTVEECWDLLSQTEVGRLAYRLVDEIHLIPINYAVEGRTILFRTAE CCCCCCCCCCEEEEEHHHHHHHHHHCHHHHHHHHHHHCEEEEEEEEEECCCEEEEEECC GNKLLAAEMHSEVAFEIDWVGDDSAWSVMVRGHLRHLDEGEQHRLSGLRIHPWIHSFKYD CCEEEEEECCCCEEEEEEECCCCCCEEEEEEHHHHCCCCCCCHHHCCEEECCHHHCCCCC HVELAPAIVTGRRFLLHKEDDEDD CEEECCEEECCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA