Click here to switch to the map view.

The map label for this gene is 119715239

Identifier: 119715239

GI number: 119715239

Start: 1045785

End: 1046675

Strand: Direct

Name: 119715239

Synonym: Noca_0996

Alternate gene names: NA

Gene position: 1045785-1046675 (Clockwise)

Preceding gene: 119715237

Following gene: 119715240

Centisome position: 20.97

GC content: 76.66

Gene sequence:

>891_bases
ATGCTCGAGATCGAACCCAGGAAGGTCCTGCTCTGCGTGGGCGACGAGGACGTCGACGGGGCGCTCGGGTACGCCGTCGC
CGAGGCCCGCCGTCGGGAGGTCGGGGTGCACCTGCTGCACGCCGTACCCGGGATGTCCGTGGGCGCCGACCCGACCGCGA
TGGTGATCGAGGGTGACGCCCTCTGCGCCCAGGGCGGGCGGATCCTGACGGCCGTGGCCGGGCGGCTGGAGAAGGAGCTG
GGCGAGCTGCCGGTGAGCACCGAGCTGCAGACCGGCCCGGTCGTCCGGGTGCTCACGGCGGCGAGCCGGCACGCGGGCGT
GGTCGTGCTGCAGCGCCAGCGGATGGGACGCCCCGGCCGGATCCCCACGCTGTCGGTCACGAACGCCGTGGCCGCGCACG
CCGCCGTCCCGGTCGTGGCGGTCCCGGCGAGCTGGGAGCCCGACGCCGAGCGCGACCCGGTCGTCGTCGCGGGCCTCGGC
GACGCCGAGCTCGCGCCGGACGTGGTGCGCACCGCGCTCGCCGAGGCCGCCCGCCGTGGCGGACGGGCCCGGCTGCTGCA
CGCGTGGCACTACTCCGACGCCTACGACGACCTGGTCTTCGCCGGGGCTGGAGCGGAGGACCACGAGGCCCGCCTGCTCC
GCGAGCTGGAGGCCGGCCTGGCACCGCTCCTCGCCGAGCACCCGGACGTGCCCGTGGAGCTGGTTCCCGTCCACGCCCGC
CCGGCCGACGTCCTCGTGGCCGAGTCGCACACCGCTGGGGTGGTCGTGCTCGGTCGGCACCGCTCCTCGATGCCGTGGGG
GCCGCACCTCGGCTCGGTGGTGCGGGCCGTGCTGCGCGAGTCGCGCTCGCCGGTGCTCGTGGTCGACCCCTCCCCGGCGC
GCACCGAGTAG

Upstream 100 bases:

>100_bases
AGATTGGCAGGAAGAGGACCGGAGCAGAGGAGGCCGCCGATGTCCGCCGCCGGCGCGCGCGGCGGCGCCTGACCGGGAGT
AGGACCGAGGAGGAGACGAC

Downstream 100 bases:

>100_bases
GTCGACTCGGCGCGTCCTGCCTGCGCGGGCGGCTCGGCAGTGTCTCCGTGGCCGGGTTGCGCGTGGTCGGGGCGGGGCCG
GCGGTGTGCCAGCAACCGGT

Product: UspA domain-containing protein

Products: NA

Alternate protein names: USP Rv2026c [H]

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MLEIEPRKVLLCVGDEDVDGALGYAVAEARRREVGVHLLHAVPGMSVGADPTAMVIEGDALCAQGGRILTAVAGRLEKEL
GELPVSTELQTGPVVRVLTAASRHAGVVVLQRQRMGRPGRIPTLSVTNAVAAHAAVPVVAVPASWEPDAERDPVVVAGLG
DAELAPDVVRTALAEAARRGGRARLLHAWHYSDAYDDLVFAGAGAEDHEARLLRELEAGLAPLLAEHPDVPVELVPVHAR
PADVLVAESHTAGVVVLGRHRSSMPWGPHLGSVVRAVLRESRSPVLVVDPSPARTE

Sequences:

>Translated_296_residues
MLEIEPRKVLLCVGDEDVDGALGYAVAEARRREVGVHLLHAVPGMSVGADPTAMVIEGDALCAQGGRILTAVAGRLEKEL
GELPVSTELQTGPVVRVLTAASRHAGVVVLQRQRMGRPGRIPTLSVTNAVAAHAAVPVVAVPASWEPDAERDPVVVAGLG
DAELAPDVVRTALAEAARRGGRARLLHAWHYSDAYDDLVFAGAGAEDHEARLLRELEAGLAPLLAEHPDVPVELVPVHAR
PADVLVAESHTAGVVVLGRHRSSMPWGPHLGSVVRAVLRESRSPVLVVDPSPARTE
>Mature_296_residues
MLEIEPRKVLLCVGDEDVDGALGYAVAEARRREVGVHLLHAVPGMSVGADPTAMVIEGDALCAQGGRILTAVAGRLEKEL
GELPVSTELQTGPVVRVLTAASRHAGVVVLQRQRMGRPGRIPTLSVTNAVAAHAAVPVVAVPASWEPDAERDPVVVAGLG
DAELAPDVVRTALAEAARRGGRARLLHAWHYSDAYDDLVFAGAGAEDHEARLLRELEAGLAPLLAEHPDVPVELVPVHAR
PADVLVAESHTAGVVVLGRHRSSMPWGPHLGSVVRAVLRESRSPVLVVDPSPARTE

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 31143; Mature: 31143

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEIEPRKVLLCVGDEDVDGALGYAVAEARRREVGVHLLHAVPGMSVGADPTAMVIEGDA
CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEHHCCCCCCCCCCEEEEEECCC
LCAQGGRILTAVAGRLEKELGELPVSTELQTGPVVRVLTAASRHAGVVVLQRQRMGRPGR
EECCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHCCCCCEEEEEHHHCCCCCC
IPTLSVTNAVAAHAAVPVVAVPASWEPDAERDPVVVAGLGDAELAPDVVRTALAEAARRG
CCEEEHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCC
GRARLLHAWHYSDAYDDLVFAGAGAEDHEARLLRELEAGLAPLLAEHPDVPVELVPVHAR
CCEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHCHHHHHHCCCCCCEEEEEECCC
PADVLVAESHTAGVVVLGRHRSSMPWGPHLGSVVRAVLRESRSPVLVVDPSPARTE
CCEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MLEIEPRKVLLCVGDEDVDGALGYAVAEARRREVGVHLLHAVPGMSVGADPTAMVIEGDA
CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEHHCCCCCCCCCCEEEEEECCC
LCAQGGRILTAVAGRLEKELGELPVSTELQTGPVVRVLTAASRHAGVVVLQRQRMGRPGR
EECCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHCCCCCEEEEEHHHCCCCCC
IPTLSVTNAVAAHAAVPVVAVPASWEPDAERDPVVVAGLGDAELAPDVVRTALAEAARRG
CCEEEHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCC
GRARLLHAWHYSDAYDDLVFAGAGAEDHEARLLRELEAGLAPLLAEHPDVPVELVPVHAR
CCEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHCHHHHHHCCCCCCEEEEEECCC
PADVLVAESHTAGVVVLGRHRSSMPWGPHLGSVVRAVLRESRSPVLVVDPSPARTE
CCEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]