| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119715183
Identifier: 119715183
GI number: 119715183
Start: 983957
End: 985003
Strand: Reverse
Name: 119715183
Synonym: Noca_0938
Alternate gene names: NA
Gene position: 985003-983957 (Counterclockwise)
Preceding gene: 119715191
Following gene: 119715172
Centisome position: 19.76
GC content: 76.22
Gene sequence:
>1047_bases GTGGGTAAAGCCGCCGCCGCTCGCAAGCTGGCCTCCGCCGCCGCGTACGGCGGGGGCGGCGTCTCGGTGCTCGGCGGAGC GCTCTACGGCCTGCTCCGGGTCGAGGCCCGGGTGGCGCGCAAGACCATCGGCCGCCTCGATGACGACCCGCCCGACCCGA CCGGCTGGTACGGCCGCGGCCGGCCCGGCCCCGCGATCAAGGTCGCGCTGCTCGGGGATTCCAGCGCCGCGGGGTACGGC GTGGAGCGGGTCGAGGAGACTCCCGGCGCGCTGCTCGCCAGCGGGCTGGCCGAGCGGGCCGACCGCAGGGTCTACCTGCG CGACTTCGCGGTCGTGGGCGCGATGTCCTCCGACCTGTCCAGCCAGATCGACAAGGCGCTCCCGACCGAGCCGCACGTCG CGGTGATCCTGATCGGCGCCAACGACGTCACGCACAGCGTGCTGCCGTCGGCGTCGGTGCGCCACCTCTCCGAGGCCGTC ACGCGGCTCCGCGAGGCGGGTGTGCTCGTGCTCGTCGGGACCTGTCCCGACCTCGGCACCATCAAGCCGATCGCCCCGCC GCTCAAGCAGGTGGCCCGCGCCTGGTCGCGCCGGCTCGCGGCCGCCCAGACGATCGCCGTGGTCGAGGCGGGCGGGCGCA CCGTCTCCCTCGGCTCGATCCTCGGCCCGGAGTTCGCGGCTGCGCCCGCCATCCTGTTCGGACCCGACCAGTTCCACCCC TCCGCCGACGGCTACCGCTCCCTCGTCACGGTGCTGCTGCCCTCCACCCTGGCCGCGCTCGGCCTGATCCCCGACGACGA GGCCGAGCCGGAGGCCTATCGCGGCGAGGGCGTGCTGCCGATCACCGCCGCCGCGCTCCAGGCCGTCAACGTGCCCGGCA CCGAGCTGGGCGGCACCGAGGTCGGCGGCTCGCGCCGCGGCGTCCGGGGCCTGTGGGTCGAGCTGCGGCACCGCCGGCGC CACCCCGGGACGGCGGCCGAGGCGCCCGAGCACGACGGCGAGGACGCGGCTCCGGACGAGGAGCTTGAGGGAGCCGGCGA GACGTAG
Upstream 100 bases:
>100_bases GGAGTGAGTTCACGTACTGCACCCGGCCAATCTAGGGGCGGTCCGCACCTTCTCGTAAACCCCGGGCGTCCGCGCTGGCC GGCGTCCGTAGAGTGACGGC
Downstream 100 bases:
>100_bases GCCAGCGCGCGTCCGCGGCAGGGAAGACCCCACCCCGATCGGCGGTCCAGGCCCGCGAGCGGCCTTCGGCGCTCTTGGCG TCGAGGCATGAACGCCCCCC
Product: GDSL family lipase
Products: NA
Alternate protein names: GDSL Family Lipase; Lipolytic Protein G-D-S-L Family; G-D-S-L Family Lipolytic Protein; Lipolytic; Lipolytic G-D-S-L; Conserved Exported Protein; Lipid Hydrolase; LOW QUALITY PROTEIN Secreted Protein; SGNH Hydrolase; Lipase; Lysophospholipase L1-Like Esterase
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MGKAAAARKLASAAAYGGGGVSVLGGALYGLLRVEARVARKTIGRLDDDPPDPTGWYGRGRPGPAIKVALLGDSSAAGYG VERVEETPGALLASGLAERADRRVYLRDFAVVGAMSSDLSSQIDKALPTEPHVAVILIGANDVTHSVLPSASVRHLSEAV TRLREAGVLVLVGTCPDLGTIKPIAPPLKQVARAWSRRLAAAQTIAVVEAGGRTVSLGSILGPEFAAAPAILFGPDQFHP SADGYRSLVTVLLPSTLAALGLIPDDEAEPEAYRGEGVLPITAAALQAVNVPGTELGGTEVGGSRRGVRGLWVELRHRRR HPGTAAEAPEHDGEDAAPDEELEGAGET
Sequences:
>Translated_348_residues MGKAAAARKLASAAAYGGGGVSVLGGALYGLLRVEARVARKTIGRLDDDPPDPTGWYGRGRPGPAIKVALLGDSSAAGYG VERVEETPGALLASGLAERADRRVYLRDFAVVGAMSSDLSSQIDKALPTEPHVAVILIGANDVTHSVLPSASVRHLSEAV TRLREAGVLVLVGTCPDLGTIKPIAPPLKQVARAWSRRLAAAQTIAVVEAGGRTVSLGSILGPEFAAAPAILFGPDQFHP SADGYRSLVTVLLPSTLAALGLIPDDEAEPEAYRGEGVLPITAAALQAVNVPGTELGGTEVGGSRRGVRGLWVELRHRRR HPGTAAEAPEHDGEDAAPDEELEGAGET >Mature_347_residues GKAAAARKLASAAAYGGGGVSVLGGALYGLLRVEARVARKTIGRLDDDPPDPTGWYGRGRPGPAIKVALLGDSSAAGYGV ERVEETPGALLASGLAERADRRVYLRDFAVVGAMSSDLSSQIDKALPTEPHVAVILIGANDVTHSVLPSASVRHLSEAVT RLREAGVLVLVGTCPDLGTIKPIAPPLKQVARAWSRRLAAAQTIAVVEAGGRTVSLGSILGPEFAAAPAILFGPDQFHPS ADGYRSLVTVLLPSTLAALGLIPDDEAEPEAYRGEGVLPITAAALQAVNVPGTELGGTEVGGSRRGVRGLWVELRHRRRH PGTAAEAPEHDGEDAAPDEELEGAGET
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35854; Mature: 35723
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKAAAARKLASAAAYGGGGVSVLGGALYGLLRVEARVARKTIGRLDDDPPDPTGWYGRG CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC RPGPAIKVALLGDSSAAGYGVERVEETPGALLASGLAERADRRVYLRDFAVVGAMSSDLS CCCCEEEEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHH SQIDKALPTEPHVAVILIGANDVTHSVLPSASVRHLSEAVTRLREAGVLVLVGTCPDLGT HHHHHHCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCC IKPIAPPLKQVARAWSRRLAAAQTIAVVEAGGRTVSLGSILGPEFAAAPAILFGPDQFHP CCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCHHCCHHHHCCEEEECCCCCCC SADGYRSLVTVLLPSTLAALGLIPDDEAEPEAYRGEGVLPITAAALQAVNVPGTELGGTE CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCCCCCCCCC VGGSRRGVRGLWVELRHRRRHPGTAAEAPEHDGEDAAPDEELEGAGET CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCC >Mature Secondary Structure GKAAAARKLASAAAYGGGGVSVLGGALYGLLRVEARVARKTIGRLDDDPPDPTGWYGRG CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC RPGPAIKVALLGDSSAAGYGVERVEETPGALLASGLAERADRRVYLRDFAVVGAMSSDLS CCCCEEEEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHH SQIDKALPTEPHVAVILIGANDVTHSVLPSASVRHLSEAVTRLREAGVLVLVGTCPDLGT HHHHHHCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCC IKPIAPPLKQVARAWSRRLAAAQTIAVVEAGGRTVSLGSILGPEFAAAPAILFGPDQFHP CCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCHHCCHHHHCCEEEECCCCCCC SADGYRSLVTVLLPSTLAALGLIPDDEAEPEAYRGEGVLPITAAALQAVNVPGTELGGTE CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCCCCCCCCC VGGSRRGVRGLWVELRHRRRHPGTAAEAPEHDGEDAAPDEELEGAGET CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA