| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715172
Identifier: 119715172
GI number: 119715172
Start: 974800
End: 975825
Strand: Reverse
Name: 119715172
Synonym: Noca_0927
Alternate gene names: NA
Gene position: 975825-974800 (Counterclockwise)
Preceding gene: 119715183
Following gene: 119715155
Centisome position: 19.57
GC content: 73.29
Gene sequence:
>1026_bases GTGGTTCGCGACGGAGTGGTCGTCCCCGTTCCTATCGACTCTGCAGGCCGGACCGGCCCGACTCGCCGTCAGGCGGCCGG GCCCGAATGGCGTCGGAGCAGCAAGGGCCACTACGTGCCGGCGTACGTCGACCCGGACACGCCCGCCCAGCGCGTCGTCG AGGCCGCCGTGCTGCTGCCGGAGCACGGCGCGGTCACGGGTTGGGCCGGGCTGCACTGGGCTCGGGCGCGCTGGTTCGAC GGCCTCGCACCCGACGGACGTACCGCCCTGCCCGTGCCGCTGGCGCTCGGTCGCAACCGGGTGGTGCGCTCGCGACCAGG AGTCCTCCTCTCCGAGGAGTGGCTCGAACCGGCCGAGGTCATCGGCCTCGACGGACTCCCGGTCACCGAGCACGCGCGCT CCGTGTGCTTCGAGATCCGGCGGGCACGGAGCCCGGAGCAGGCCGTGATCATCGCCGACATGGCCGCGTTCTCGGACCTG GTCTCGATCGCGGAGATTCGCCGGCACGCCGAGCGGTATCTCTCCGGACGCCCGCATGCCTCCCGCATCACCCGGACGCT GGACCTCGCCGACGAGAACGCCTGGTCTCCGCGCGAGGTCGCGATGCGGATCTCGTGGTCGAGCGCCCACCCACGCCCGC TCTGCAACGTCCCGATCTTCGCGCCCGACGGCAGCCACCTGCTCACGCCCGACCTGTTCGACCCGGACCACGGCGTTCTG GGCGAGTACGACGGCCTGGTCCATGTCGAGGACGGCCGGCGGGTCCGCGATCTGGAACGAGAGGAGCTGGTCCGAGACCT CGGTCTCGAGCTGGTGACGATGGTCGCGGCCGACAACGCCGACCGGCGTGCCTTCCTGTGCCGGATCGACGCGGCCTACC GCCGGGCGGCGGGCCGCCGGCGCACCGGCGCGTGGACGTTGGACCAGCCGGCGTGGTGGGTCGACACGTCGACGGTCGCG CGCCGGCGGGCGCTGTCCACGGTGCAGCGAGCCACCTGGCTCACGCGTCAGGCCGCGCGCCCCTGA
Upstream 100 bases:
>100_bases GTCGCGTGCCCGTTCGTCAGGGGCGCGCGAGCGGCCTGTGGAGGACGCCCGCCCCGAGCAGCCGATCCCCCGCATCCTCG TGCCCATGGAGCTCTCGGGA
Downstream 100 bases:
>100_bases CCTGCCGCACGCGCTCACGGCGTGTCGCGTGCCCGTTCGTCAGGGACGCCCGTCAGGGCGGCGGCGCGAGCAGCCGGCGT ACGGCGTCGCGCAGGGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MVRDGVVVPVPIDSAGRTGPTRRQAAGPEWRRSSKGHYVPAYVDPDTPAQRVVEAAVLLPEHGAVTGWAGLHWARARWFD GLAPDGRTALPVPLALGRNRVVRSRPGVLLSEEWLEPAEVIGLDGLPVTEHARSVCFEIRRARSPEQAVIIADMAAFSDL VSIAEIRRHAERYLSGRPHASRITRTLDLADENAWSPREVAMRISWSSAHPRPLCNVPIFAPDGSHLLTPDLFDPDHGVL GEYDGLVHVEDGRRVRDLEREELVRDLGLELVTMVAADNADRRAFLCRIDAAYRRAAGRRRTGAWTLDQPAWWVDTSTVA RRRALSTVQRATWLTRQAARP
Sequences:
>Translated_341_residues MVRDGVVVPVPIDSAGRTGPTRRQAAGPEWRRSSKGHYVPAYVDPDTPAQRVVEAAVLLPEHGAVTGWAGLHWARARWFD GLAPDGRTALPVPLALGRNRVVRSRPGVLLSEEWLEPAEVIGLDGLPVTEHARSVCFEIRRARSPEQAVIIADMAAFSDL VSIAEIRRHAERYLSGRPHASRITRTLDLADENAWSPREVAMRISWSSAHPRPLCNVPIFAPDGSHLLTPDLFDPDHGVL GEYDGLVHVEDGRRVRDLEREELVRDLGLELVTMVAADNADRRAFLCRIDAAYRRAAGRRRTGAWTLDQPAWWVDTSTVA RRRALSTVQRATWLTRQAARP >Mature_341_residues MVRDGVVVPVPIDSAGRTGPTRRQAAGPEWRRSSKGHYVPAYVDPDTPAQRVVEAAVLLPEHGAVTGWAGLHWARARWFD GLAPDGRTALPVPLALGRNRVVRSRPGVLLSEEWLEPAEVIGLDGLPVTEHARSVCFEIRRARSPEQAVIIADMAAFSDL VSIAEIRRHAERYLSGRPHASRITRTLDLADENAWSPREVAMRISWSSAHPRPLCNVPIFAPDGSHLLTPDLFDPDHGVL GEYDGLVHVEDGRRVRDLEREELVRDLGLELVTMVAADNADRRAFLCRIDAAYRRAAGRRRTGAWTLDQPAWWVDTSTVA RRRALSTVQRATWLTRQAARP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37932; Mature: 37932
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRDGVVVPVPIDSAGRTGPTRRQAAGPEWRRSSKGHYVPAYVDPDTPAQRVVEAAVLLP CCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCC EHGAVTGWAGLHWARARWFDGLAPDGRTALPVPLALGRNRVVRSRPGVLLSEEWLEPAEV CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEECCCCCCEECHHHCCHHHH IGLDGLPVTEHARSVCFEIRRARSPEQAVIIADMAAFSDLVSIAEIRRHAERYLSGRPHA CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCH SRITRTLDLADENAWSPREVAMRISWSSAHPRPLCNVPIFAPDGSHLLTPDLFDPDHGVL HHHHHHHCCCCCCCCCHHHEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC GEYDGLVHVEDGRRVRDLEREELVRDLGLELVTMVAADNADRRAFLCRIDAAYRRAAGRR CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHCCCC RTGAWTLDQPAWWVDTSTVARRRALSTVQRATWLTRQAARP CCCCEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVRDGVVVPVPIDSAGRTGPTRRQAAGPEWRRSSKGHYVPAYVDPDTPAQRVVEAAVLLP CCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCC EHGAVTGWAGLHWARARWFDGLAPDGRTALPVPLALGRNRVVRSRPGVLLSEEWLEPAEV CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEECCCCCCEECHHHCCHHHH IGLDGLPVTEHARSVCFEIRRARSPEQAVIIADMAAFSDLVSIAEIRRHAERYLSGRPHA CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCH SRITRTLDLADENAWSPREVAMRISWSSAHPRPLCNVPIFAPDGSHLLTPDLFDPDHGVL HHHHHHHCCCCCCCCCHHHEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC GEYDGLVHVEDGRRVRDLEREELVRDLGLELVTMVAADNADRRAFLCRIDAAYRRAAGRR CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHCCCC RTGAWTLDQPAWWVDTSTVARRRALSTVQRATWLTRQAARP CCCCEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA