Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119715178

Identifier: 119715178

GI number: 119715178

Start: 979860

End: 980108

Strand: Direct

Name: 119715178

Synonym: Noca_0933

Alternate gene names: NA

Gene position: 979860-980108 (Clockwise)

Preceding gene: 119715177

Following gene: 119715179

Centisome position: 19.65

GC content: 75.9

Gene sequence:

>249_bases
GTGAGCAGCAACGGCACGTCACCCCAGCGGCTCGAGGCCGACATCGCCCGGCAGCGCGAGGACCTGGCGACGACGGTGGA
CCAGCTCCACGCGAAGCTCGACGTGAAGGCACGCGCCCAGGACAAGGCGCACGAGCTCAAGGACCGGGCCACCACCGCCG
ACGGCCGGCCGCGCCCCGACCTCACGGCGGCCGCCGTCGCCGCCGTCGTCCTGGCCGCCGGACTGCTGGCCTGGCGGCGC
CGCCGTTGA

Upstream 100 bases:

>100_bases
TGGGTGGCCGCAGCGAGATCCAGCAGGCGACGCCGCCCACGCCCGAGGTCACCATCGCGAACGTCAAGGAGGACGTCGCC
ACGCTGAAGGGAGAGCGCCG

Downstream 100 bases:

>100_bases
CGCCTGAAGCGCCGACCCGATCAACCGCCCGATCCACCGGCCCCCGATGAAGGAGTCCCCATGAAGAAGCTGACCCTGCT
CGCCGGCGTCGCCGTCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MSSNGTSPQRLEADIARQREDLATTVDQLHAKLDVKARAQDKAHELKDRATTADGRPRPDLTAAAVAAVVLAAGLLAWRR
RR

Sequences:

>Translated_82_residues
MSSNGTSPQRLEADIARQREDLATTVDQLHAKLDVKARAQDKAHELKDRATTADGRPRPDLTAAAVAAVVLAAGLLAWRR
RR
>Mature_81_residues
SSNGTSPQRLEADIARQREDLATTVDQLHAKLDVKARAQDKAHELKDRATTADGRPRPDLTAAAVAAVVLAAGLLAWRRR
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8941; Mature: 8810

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNGTSPQRLEADIARQREDLATTVDQLHAKLDVKARAQDKAHELKDRATTADGRPRPD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
LTAAAVAAVVLAAGLLAWRRRR
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSNGTSPQRLEADIARQREDLATTVDQLHAKLDVKARAQDKAHELKDRATTADGRPRPD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
LTAAAVAAVVLAAGLLAWRRRR
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA