| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715177
Identifier: 119715177
GI number: 119715177
Start: 979462
End: 979863
Strand: Direct
Name: 119715177
Synonym: Noca_0932
Alternate gene names: NA
Gene position: 979462-979863 (Clockwise)
Preceding gene: 119715176
Following gene: 119715178
Centisome position: 19.64
GC content: 72.39
Gene sequence:
>402_bases ATGACCGATCCGCGTACGACGACCGATGAACCAGTCGGCGCACTCGTGCACCGGCTCTCCGAGCAGATCCCCGAGCTGGT CCGCACCGAGCTGCGGCTGGCCCAGGCCGAGCTCGCCCAGAAGGGCAAGCGCGCCGGCCTCGGGATCGGCATGTTCAGCC TGGCCGGGCTGCTGGCGTTCCTCGCCACCGCCACCCTGGTCGCCACCGCCGTGATCGCCCTCGACCTGGTGCTGCCGCTG TGGGCGGCGGGCCTGATCGTCGCCGGCGTGCTCCTGATCGGGGCGTTGGGCGCCGGCCTGGGTGGCCGCAGCGAGATCCA GCAGGCGACGCCGCCCACGCCCGAGGTCACCATCGCGAACGTCAAGGAGGACGTCGCCACGCTGAAGGGAGAGCGCCGGT GA
Upstream 100 bases:
>100_bases GGCCGACATCCTCGACGGGATCGCTTGGTCGATCGGCCGGTGAGACCGGCGGCTGACGTACGGGCGTTTCTGGACCGGGC CTGGTGGGCACCGGGGCCCC
Downstream 100 bases:
>100_bases GCAGCAACGGCACGTCACCCCAGCGGCTCGAGGCCGACATCGCCCGGCAGCGCGAGGACCTGGCGACGACGGTGGACCAG CTCCACGCGAAGCTCGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MTDPRTTTDEPVGALVHRLSEQIPELVRTELRLAQAELAQKGKRAGLGIGMFSLAGLLAFLATATLVATAVIALDLVLPL WAAGLIVAGVLLIGALGAGLGGRSEIQQATPPTPEVTIANVKEDVATLKGERR
Sequences:
>Translated_133_residues MTDPRTTTDEPVGALVHRLSEQIPELVRTELRLAQAELAQKGKRAGLGIGMFSLAGLLAFLATATLVATAVIALDLVLPL WAAGLIVAGVLLIGALGAGLGGRSEIQQATPPTPEVTIANVKEDVATLKGERR >Mature_132_residues TDPRTTTDEPVGALVHRLSEQIPELVRTELRLAQAELAQKGKRAGLGIGMFSLAGLLAFLATATLVATAVIALDLVLPLW AAGLIVAGVLLIGALGAGLGGRSEIQQATPPTPEVTIANVKEDVATLKGERR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13784; Mature: 13653
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPRTTTDEPVGALVHRLSEQIPELVRTELRLAQAELAQKGKRAGLGIGMFSLAGLLAF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LATATLVATAVIALDLVLPLWAAGLIVAGVLLIGALGAGLGGRSEIQQATPPTPEVTIAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEHHH VKEDVATLKGERR HHHHHHHHCCCCC >Mature Secondary Structure TDPRTTTDEPVGALVHRLSEQIPELVRTELRLAQAELAQKGKRAGLGIGMFSLAGLLAF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LATATLVATAVIALDLVLPLWAAGLIVAGVLLIGALGAGLGGRSEIQQATPPTPEVTIAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEHHH VKEDVATLKGERR HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA