| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715126
Identifier: 119715126
GI number: 119715126
Start: 919445
End: 919984
Strand: Direct
Name: 119715126
Synonym: Noca_0881
Alternate gene names: NA
Gene position: 919445-919984 (Clockwise)
Preceding gene: 119715125
Following gene: 119715127
Centisome position: 18.44
GC content: 73.15
Gene sequence:
>540_bases ATGGATGCTCAGGTATGGAGGCTGCCTCGCCGCGGCGGCGGGCCCGGCCGACTCGTCGTCGCGCTCGTCCTCTCCACGGT GCTCGCGGGCTGCGCGTACGCCGGCGACCCACCCGACCGGGACGTCGAGACCGCCGACGGCACGATCGCGCTCGACCTCC CGGCCGGCTGGGGGCGATCGCCCGACCCGGTCGAGCCACCGACCGTGCTGCTGGCCGAGGGGACCGGCGACGAGCACCTC GTGGTCAGCCTGTTCGAGGGCGCGGACACCGCCGAGCAGCGGGCGATCGAGGCGGCGGTGCGGTACATCGACTCCTACGG CCTGCCGTGCCGGCGGCTCGACGACAACCCGATCTGGGACGGCCCGGTCCTCGACTGTCGCGACCAGACGCGCCGGCCCT GGATGCACAAGGTCCTGGTCCCGATCCCGGGCGAGGGCGTGAGCGCCCTGCTGCTCGTGCAAGCCGAGGCGGACTCCTGG GACGAAGCGGTCGACGTGGTGAAGCCAGTCCTCGACTCGTTCCTCTGGGCCGAGCCGTAA
Upstream 100 bases:
>100_bases GGACGCCCGCGTCCGCGCCCGCTGGCGAATCGGGCAGCCCCGTGATCGCGGGCCTGTGGAGAACCGTCGACGCGGTCCGT CAACGGGGAATGCTCCGCCC
Downstream 100 bases:
>100_bases TCGAGGTGCCGGGCCGCACCGCGTGCAGGACAATCGTGCGACGTGGGACACGTAGACGTGGCCGGGGTGCGCTATGAGCT GCCCGACGGGCGAGTGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MDAQVWRLPRRGGGPGRLVVALVLSTVLAGCAYAGDPPDRDVETADGTIALDLPAGWGRSPDPVEPPTVLLAEGTGDEHL VVSLFEGADTAEQRAIEAAVRYIDSYGLPCRRLDDNPIWDGPVLDCRDQTRRPWMHKVLVPIPGEGVSALLLVQAEADSW DEAVDVVKPVLDSFLWAEP
Sequences:
>Translated_179_residues MDAQVWRLPRRGGGPGRLVVALVLSTVLAGCAYAGDPPDRDVETADGTIALDLPAGWGRSPDPVEPPTVLLAEGTGDEHL VVSLFEGADTAEQRAIEAAVRYIDSYGLPCRRLDDNPIWDGPVLDCRDQTRRPWMHKVLVPIPGEGVSALLLVQAEADSW DEAVDVVKPVLDSFLWAEP >Mature_179_residues MDAQVWRLPRRGGGPGRLVVALVLSTVLAGCAYAGDPPDRDVETADGTIALDLPAGWGRSPDPVEPPTVLLAEGTGDEHL VVSLFEGADTAEQRAIEAAVRYIDSYGLPCRRLDDNPIWDGPVLDCRDQTRRPWMHKVLVPIPGEGVSALLLVQAEADSW DEAVDVVKPVLDSFLWAEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19329; Mature: 19329
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAQVWRLPRRGGGPGRLVVALVLSTVLAGCAYAGDPPDRDVETADGTIALDLPAGWGRS CCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCC PDPVEPPTVLLAEGTGDEHLVVSLFEGADTAEQRAIEAAVRYIDSYGLPCRRLDDNPIWD CCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GPVLDCRDQTRRPWMHKVLVPIPGEGVSALLLVQAEADSWDEAVDVVKPVLDSFLWAEP CCCCCCCCCCCCCCHHEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDAQVWRLPRRGGGPGRLVVALVLSTVLAGCAYAGDPPDRDVETADGTIALDLPAGWGRS CCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCC PDPVEPPTVLLAEGTGDEHLVVSLFEGADTAEQRAIEAAVRYIDSYGLPCRRLDDNPIWD CCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GPVLDCRDQTRRPWMHKVLVPIPGEGVSALLLVQAEADSWDEAVDVVKPVLDSFLWAEP CCCCCCCCCCCCCCHHEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA