| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is yghZ [H]
Identifier: 119715125
GI number: 119715125
Start: 918100
End: 919143
Strand: Direct
Name: yghZ [H]
Synonym: Noca_0880
Alternate gene names: 119715125
Gene position: 918100-919143 (Clockwise)
Preceding gene: 119715124
Following gene: 119715126
Centisome position: 18.41
GC content: 69.54
Gene sequence:
>1044_bases ATGACCTACGCCGCCGCTCCCGACCGCTACGAGTCCGACGCCACCGGGATGCGCTACCGCTTCACGGGTCGCAGCGGGCT GCAGCTGCCACTGATCTCCCTGGGGCTGTGGCAGAACTTCGGTGACGACCGGTCCGAGGACAACCAGCGTGCGATCCTGC GCCGCGCGTTCGACCGCGGCGTGACCCACTTCGACCTGGCGAACAACTACGGCCCGCCGTACGGCCGGGCGGAGGAGAAC TTCGGCCGCTACCTCCGCGACGACTTCGCGCCCTATCGCGACGAGCTCGTGATCTCCACGAAGGCCGGCTACGACATGTG GCCCGGGCCCTACGGGCAGGGTGGCGGCTCGCGGAAGTACGTCCTCGCCTCGCTCGACCAGTCGCTGCGCCGGATGGGGC TGGACTACGTCGACATCTTCTACAGCCACCGGTTCGACCCCGACACCCCCGTCGAGGAGACGATGGCGGCGCTCGACCAG GCGGTGCGGCAGGGCAAGGCGCTGTACGCCGGCATCTCGTCGTACTCCGCCGAGAAGACCAACGAGGCCGCCTCGATCGC CCGCGAGCTCGGCACCCCGCTGCTGATCCACCAGCCGTCGTACTCGATGCTCAACCGGTGGATCGAGCAGGACCTGCTCG ACGAGCTCGAGCAGCAGGGGATGGGCTGCATCGTCTTCTCGCCGCTCGCCCAGGGCCTGCTGACCGATCGCTACCTCGGC GGCGTCCCGCAGGACTCTCGTGCTGCACGCCAGAACTCCTCGCTGCCGGGCGACCACCTCGACGACGCCACCCTCGGGCA CGTCCGCCGGCTCGACGAGATCGCGCGGGCTCGTGGCCAGAAGCTCGCCCAGCTCGCGCTGCAGTGGTCGGTGCGTGACC CGCGGGTCACCTCCGCTCTGATCGGGGCCAGCTCGGTCGAGCAGCTGGACACCAACCTCGACGCGCTGACCTTCCCGGAC CTGACGGCCGACGAGCTCACGGCCATCGACGAGAACGCCGTCGAGGCGGGGATCAACCTGTGGGCACACTCGTCCGAGGA CTGA
Upstream 100 bases:
>100_bases GGCTGCGCGCCGCCACCGTCCGCGGGGTCGTCGCCCGGCGCGGTCCGCGGGTGGGCTGACCCGGATCCGCCGGCGGGCGG GCTGCTGGCAGGATCGGAGC
Downstream 100 bases:
>100_bases TCGCCCGGTCCCGGCTGTGCTCTGATCGCGGGCACCCGACCGGCGCCGGCGCCGCGAGCAGGGCGCCCGTCAGGATGTCG ATCACGCCGCGCTCCGTGCC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTYAAAPDRYESDATGMRYRFTGRSGLQLPLISLGLWQNFGDDRSEDNQRAILRRAFDRGVTHFDLANNYGPPYGRAEEN FGRYLRDDFAPYRDELVISTKAGYDMWPGPYGQGGGSRKYVLASLDQSLRRMGLDYVDIFYSHRFDPDTPVEETMAALDQ AVRQGKALYAGISSYSAEKTNEAASIARELGTPLLIHQPSYSMLNRWIEQDLLDELEQQGMGCIVFSPLAQGLLTDRYLG GVPQDSRAARQNSSLPGDHLDDATLGHVRRLDEIARARGQKLAQLALQWSVRDPRVTSALIGASSVEQLDTNLDALTFPD LTADELTAIDENAVEAGINLWAHSSED
Sequences:
>Translated_347_residues MTYAAAPDRYESDATGMRYRFTGRSGLQLPLISLGLWQNFGDDRSEDNQRAILRRAFDRGVTHFDLANNYGPPYGRAEEN FGRYLRDDFAPYRDELVISTKAGYDMWPGPYGQGGGSRKYVLASLDQSLRRMGLDYVDIFYSHRFDPDTPVEETMAALDQ AVRQGKALYAGISSYSAEKTNEAASIARELGTPLLIHQPSYSMLNRWIEQDLLDELEQQGMGCIVFSPLAQGLLTDRYLG GVPQDSRAARQNSSLPGDHLDDATLGHVRRLDEIARARGQKLAQLALQWSVRDPRVTSALIGASSVEQLDTNLDALTFPD LTADELTAIDENAVEAGINLWAHSSED >Mature_346_residues TYAAAPDRYESDATGMRYRFTGRSGLQLPLISLGLWQNFGDDRSEDNQRAILRRAFDRGVTHFDLANNYGPPYGRAEENF GRYLRDDFAPYRDELVISTKAGYDMWPGPYGQGGGSRKYVLASLDQSLRRMGLDYVDIFYSHRFDPDTPVEETMAALDQA VRQGKALYAGISSYSAEKTNEAASIARELGTPLLIHQPSYSMLNRWIEQDLLDELEQQGMGCIVFSPLAQGLLTDRYLGG VPQDSRAARQNSSLPGDHLDDATLGHVRRLDEIARARGQKLAQLALQWSVRDPRVTSALIGASSVEQLDTNLDALTFPDL TADELTAIDENAVEAGINLWAHSSED
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27436969, Length=333, Percent_Identity=34.8348348348348, Blast_Score=181, Evalue=9e-46, Organism=Homo sapiens, GI4504825, Length=325, Percent_Identity=35.0769230769231, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI27436964, Length=324, Percent_Identity=34.2592592592593, Blast_Score=176, Evalue=2e-44, Organism=Homo sapiens, GI27436962, Length=324, Percent_Identity=34.2592592592593, Blast_Score=175, Evalue=7e-44, Organism=Homo sapiens, GI27436971, Length=324, Percent_Identity=35.1851851851852, Blast_Score=173, Evalue=2e-43, Organism=Homo sapiens, GI27436966, Length=324, Percent_Identity=33.9506172839506, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI223718702, Length=283, Percent_Identity=29.3286219081272, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI41152114, Length=207, Percent_Identity=28.9855072463768, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI41327764, Length=211, Percent_Identity=28.9099526066351, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI1789375, Length=350, Percent_Identity=59.7142857142857, Blast_Score=428, Evalue=1e-121, Organism=Escherichia coli, GI87081735, Length=315, Percent_Identity=36.1904761904762, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI1789199, Length=348, Percent_Identity=27.8735632183908, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1788070, Length=322, Percent_Identity=27.3291925465839, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1788081, Length=316, Percent_Identity=26.5822784810127, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6325169, Length=332, Percent_Identity=25.9036144578313, Blast_Score=100, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6322615, Length=247, Percent_Identity=27.1255060728745, Blast_Score=83, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6323998, Length=305, Percent_Identity=24.5901639344262, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6319958, Length=296, Percent_Identity=26.0135135135135, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6319951, Length=304, Percent_Identity=26.3157894736842, Blast_Score=78, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6324694, Length=260, Percent_Identity=25.3846153846154, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24640980, Length=357, Percent_Identity=29.6918767507003, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI45549126, Length=357, Percent_Identity=29.6918767507003, Blast_Score=121, Evalue=6e-28, Organism=Drosophila melanogaster, GI24646155, Length=337, Percent_Identity=29.9703264094956, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24646159, Length=323, Percent_Identity=26.625386996904, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38592; Mature: 38461
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYAAAPDRYESDATGMRYRFTGRSGLQLPLISLGLWQNFGDDRSEDNQRAILRRAFDRG CCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC VTHFDLANNYGPPYGRAEENFGRYLRDDFAPYRDELVISTKAGYDMWPGPYGQGGGSRKY CCEEEHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHH VLASLDQSLRRMGLDYVDIFYSHRFDPDTPVEETMAALDQAVRQGKALYAGISSYSAEKT HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCHHH NEAASIARELGTPLLIHQPSYSMLNRWIEQDLLDELEQQGMGCIVFSPLAQGLLTDRYLG HHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHC GVPQDSRAARQNSSLPGDHLDDATLGHVRRLDEIARARGQKLAQLALQWSVRDPRVTSAL CCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IGASSVEQLDTNLDALTFPDLTADELTAIDENAVEAGINLWAHSSED HHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TYAAAPDRYESDATGMRYRFTGRSGLQLPLISLGLWQNFGDDRSEDNQRAILRRAFDRG CCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC VTHFDLANNYGPPYGRAEENFGRYLRDDFAPYRDELVISTKAGYDMWPGPYGQGGGSRKY CCEEEHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHH VLASLDQSLRRMGLDYVDIFYSHRFDPDTPVEETMAALDQAVRQGKALYAGISSYSAEKT HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCHHH NEAASIARELGTPLLIHQPSYSMLNRWIEQDLLDELEQQGMGCIVFSPLAQGLLTDRYLG HHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHC GVPQDSRAARQNSSLPGDHLDDATLGHVRRLDEIARARGQKLAQLALQWSVRDPRVTSAL CCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IGASSVEQLDTNLDALTFPDLTADELTAIDENAVEAGINLWAHSSED HHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]