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The map label for this gene is frc [H]

Identifier: 119715104

GI number: 119715104

Start: 896586

End: 897776

Strand: Direct

Name: frc [H]

Synonym: Noca_0859

Alternate gene names: 119715104

Gene position: 896586-897776 (Clockwise)

Preceding gene: 119715103

Following gene: 119715105

Centisome position: 17.98

GC content: 70.53

Gene sequence:

>1191_bases
ATGATGGCACTCGAAGGCGTCAAGGTCCTCGACGCGGCGTCGATGCTCGCCGGACCCTACTGCGCGACCCTGCTCGGGGA
CCTGGGCGCGGACGTGATCAAGCTCGAACCGCCGAACGGCGACGAGACCCGCCGGTTCGGCCCGCGGCGAGGATCCGACA
GCGGGGTGTTCGTCGGGGTCAACCGCAACAAGCGCAGCGTGCGCATCGACCTTCGAAGCGACGAGGGCCAGCAGGTGCTG
GCTCGTCTCGTGCAGTGGGCGGACATCGTCGTGGACAACCTGCGTCCCTCGGCCCGCCGGTCGCTCGGGCTCGACCACGA
GACGCTGCGCGCTCAGAACCCTCGCGTCATCTCGGTCTCGTTGTCGTCGTTCGGCGCCGAGGGGCCCTACGCCGGCCGCG
CGGGGATCGACCCGGTCGCCCAGGCCCTGACCGGCTTCATGGCCGTCACCGGACCTGCCGGCGGACCCCCGACGAAGGCC
GGGCCGCCGGTCGGGGACGCCACGGCCTCGCTGCTCGCCTCGGTCGGTGCCCTGGCCGCGCTGCGAGCCCGGGAGGCGAC
CGGCCACGGCCAGCAGGTCGACGTCTCGCTGATCGACGGGTTGGTGCACATCCAGGCGCCGTACACCGGGAAGTACTTCC
TGCTCGGCACGCAGCAGCCGCGTTCGGGCAACAGCATCGACTGGTACGCGCCGTACAACGCCTACGAGTGCGCCGACGGG
CGCTTCCTGCACCTGGCCTGCTACAACGACAAGTTCTTCGGCAACCTGTGCGCCGCGATGGGTCGCCCCGCGCTGGCCGA
CGACGAGCGGTTCCGGACGAACGAGCTGCGCCTGGCGAACCGTGTGGCGCTCGACGCCGAGATCGGCGCGTTCCTGGGGA
CCGTGCCCCGTGACCGGGCGCTGGACGTCCTCTGGAAGCACGACGTGATCGTCGGCCCGGTCAACGACTACGTCGACGTC
TTCAGCGACCCGCAGGTGCTCCACAACCAGATGGTGGTCGACGTCGACCACCATGCCGGGCCGTTGAAGGTCACCGGGGT
CCCGGTGAAGCTGTCCGACAACCCCGGATCCGTACGCCGGCCGCCACCCGGTCTCGGCGAGCACACCGCCGAGATCCTCG
CCGAGCTCGGCTTCGACGACGCGTTCGTCGAAGCGATCGTCGACCGGCCCGAGAAGGGGGCACTCCGATGA

Upstream 100 bases:

>100_bases
ACTACGTCGATGCGGTCATCGCGACCGTCGCCGGTGGGGCCTCGCAGGTGCAGCGCAACATCGTGGCCCGCGAGCTCGGC
CTGAAGCCGCGGTGATCGCG

Downstream 100 bases:

>100_bases
CCGGCCTCGCCTCCATCAAGGCCCCGCAGGTGGGCAGCTGGGAGGCCGCCCGGGACGCGTTCCGCTGGCCGGCGCTCGCC
GACTACAACATCGCGACCGA

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MMALEGVKVLDAASMLAGPYCATLLGDLGADVIKLEPPNGDETRRFGPRRGSDSGVFVGVNRNKRSVRIDLRSDEGQQVL
ARLVQWADIVVDNLRPSARRSLGLDHETLRAQNPRVISVSLSSFGAEGPYAGRAGIDPVAQALTGFMAVTGPAGGPPTKA
GPPVGDATASLLASVGALAALRAREATGHGQQVDVSLIDGLVHIQAPYTGKYFLLGTQQPRSGNSIDWYAPYNAYECADG
RFLHLACYNDKFFGNLCAAMGRPALADDERFRTNELRLANRVALDAEIGAFLGTVPRDRALDVLWKHDVIVGPVNDYVDV
FSDPQVLHNQMVVDVDHHAGPLKVTGVPVKLSDNPGSVRRPPPGLGEHTAEILAELGFDDAFVEAIVDRPEKGALR

Sequences:

>Translated_396_residues
MMALEGVKVLDAASMLAGPYCATLLGDLGADVIKLEPPNGDETRRFGPRRGSDSGVFVGVNRNKRSVRIDLRSDEGQQVL
ARLVQWADIVVDNLRPSARRSLGLDHETLRAQNPRVISVSLSSFGAEGPYAGRAGIDPVAQALTGFMAVTGPAGGPPTKA
GPPVGDATASLLASVGALAALRAREATGHGQQVDVSLIDGLVHIQAPYTGKYFLLGTQQPRSGNSIDWYAPYNAYECADG
RFLHLACYNDKFFGNLCAAMGRPALADDERFRTNELRLANRVALDAEIGAFLGTVPRDRALDVLWKHDVIVGPVNDYVDV
FSDPQVLHNQMVVDVDHHAGPLKVTGVPVKLSDNPGSVRRPPPGLGEHTAEILAELGFDDAFVEAIVDRPEKGALR
>Mature_396_residues
MMALEGVKVLDAASMLAGPYCATLLGDLGADVIKLEPPNGDETRRFGPRRGSDSGVFVGVNRNKRSVRIDLRSDEGQQVL
ARLVQWADIVVDNLRPSARRSLGLDHETLRAQNPRVISVSLSSFGAEGPYAGRAGIDPVAQALTGFMAVTGPAGGPPTKA
GPPVGDATASLLASVGALAALRAREATGHGQQVDVSLIDGLVHIQAPYTGKYFLLGTQQPRSGNSIDWYAPYNAYECADG
RFLHLACYNDKFFGNLCAAMGRPALADDERFRTNELRLANRVALDAEIGAFLGTVPRDRALDVLWKHDVIVGPVNDYVDV
FSDPQVLHNQMVVDVDHHAGPLKVTGVPVKLSDNPGSVRRPPPGLGEHTAEILAELGFDDAFVEAIVDRPEKGALR

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=381, Percent_Identity=34.9081364829396, Blast_Score=234, Evalue=8e-62,
Organism=Homo sapiens, GI300863124, Length=407, Percent_Identity=32.6781326781327, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI300863126, Length=382, Percent_Identity=32.7225130890052, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI13376042, Length=407, Percent_Identity=30.4668304668305, Blast_Score=185, Evalue=7e-47,
Organism=Homo sapiens, GI42794625, Length=386, Percent_Identity=27.979274611399, Blast_Score=138, Evalue=9e-33,
Organism=Homo sapiens, GI266456254, Length=386, Percent_Identity=27.979274611399, Blast_Score=138, Evalue=9e-33,
Organism=Homo sapiens, GI266458393, Length=272, Percent_Identity=31.25, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI266458397, Length=260, Percent_Identity=31.5384615384615, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI266458395, Length=144, Percent_Identity=34.0277777777778, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI42822893, Length=144, Percent_Identity=34.0277777777778, Blast_Score=81, Evalue=2e-15,
Organism=Escherichia coli, GI87082093, Length=350, Percent_Identity=32.2857142857143, Blast_Score=194, Evalue=1e-50,
Organism=Escherichia coli, GI1788717, Length=408, Percent_Identity=30.3921568627451, Blast_Score=168, Evalue=6e-43,
Organism=Escherichia coli, GI1786222, Length=398, Percent_Identity=23.8693467336683, Blast_Score=107, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI32564160, Length=268, Percent_Identity=26.865671641791, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI115535051, Length=345, Percent_Identity=25.7971014492754, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24648431, Length=378, Percent_Identity=36.2433862433862, Blast_Score=230, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24585488, Length=402, Percent_Identity=28.1094527363184, Blast_Score=115, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 42309; Mature: 42309

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMALEGVKVLDAASMLAGPYCATLLGDLGADVIKLEPPNGDETRRFGPRRGSDSGVFVGV
CCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCCCCEEEEE
NRNKRSVRIDLRSDEGQQVLARLVQWADIVVDNLRPSARRSLGLDHETLRAQNPRVISVS
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHCCCCEEEEEE
LSSFGAEGPYAGRAGIDPVAQALTGFMAVTGPAGGPPTKAGPPVGDATASLLASVGALAA
HHHCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LRAREATGHGQQVDVSLIDGLVHIQAPYTGKYFLLGTQQPRSGNSIDWYAPYNAYECADG
HHHHHCCCCCCEEEHHHHCCEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCCEECCCC
RFLHLACYNDKFFGNLCAAMGRPALADDERFRTNELRLANRVALDAEIGAFLGTVPRDRA
CEEEEEEECCCHHHHHHHHHCCCCCCCCCHHCHHHHHHHHHEEEHHHHHHHHCCCCCCHH
LDVLWKHDVIVGPVNDYVDVFSDPQVLHNQMVVDVDHHAGPLKVTGVPVKLSDNPGSVRR
HHEEEECCEEEECCHHHHHHCCCHHHHHCCEEEEECCCCCCEEEEEEEEEECCCCCCCCC
PPPGLGEHTAEILAELGFDDAFVEAIVDRPEKGALR
CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MMALEGVKVLDAASMLAGPYCATLLGDLGADVIKLEPPNGDETRRFGPRRGSDSGVFVGV
CCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCCCCEEEEE
NRNKRSVRIDLRSDEGQQVLARLVQWADIVVDNLRPSARRSLGLDHETLRAQNPRVISVS
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHCCCCEEEEEE
LSSFGAEGPYAGRAGIDPVAQALTGFMAVTGPAGGPPTKAGPPVGDATASLLASVGALAA
HHHCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LRAREATGHGQQVDVSLIDGLVHIQAPYTGKYFLLGTQQPRSGNSIDWYAPYNAYECADG
HHHHHCCCCCCEEEHHHHCCEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCCEECCCC
RFLHLACYNDKFFGNLCAAMGRPALADDERFRTNELRLANRVALDAEIGAFLGTVPRDRA
CEEEEEEECCCHHHHHHHHHCCCCCCCCCHHCHHHHHHHHHEEEHHHHHHHHCCCCCCHH
LDVLWKHDVIVGPVNDYVDVFSDPQVLHNQMVVDVDHHAGPLKVTGVPVKLSDNPGSVRR
HHEEEECCEEEECCHHHHHHCCCHHHHHCCEEEEECCCCCCEEEEEEEEEECCCCCCCCC
PPPGLGEHTAEILAELGFDDAFVEAIVDRPEKGALR
CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]