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The map label for this gene is kstR2 [H]

Identifier: 119715064

GI number: 119715064

Start: 861721

End: 862353

Strand: Reverse

Name: kstR2 [H]

Synonym: Noca_0817

Alternate gene names: 119715064

Gene position: 862353-861721 (Counterclockwise)

Preceding gene: 119715068

Following gene: 119715059

Centisome position: 17.3

GC content: 68.56

Gene sequence:

>633_bases
ATGATTTCGACGACACGGACATCCGGATCGCCGACCCCACGCGCTAACGCTCGCGGCGAGCGCGCCAGACTGCGGCTCCT
CGACGCGGCCCTGTCGGCCTTCGCGACACAGGGCTTCCACGGGACGAGCACACGTGACATCGCCGAGGCCGCGGCGATGA
GTCCGGCCGCGGTCTACGTCCACTACCGCACCAAGGAGGAACTGCTCTTCCAGCTGTCGCTTCACGGCCACCGCGAGATC
CGCCGTGTGGTGGAAACGGCATTGGGCCGCCCCGAGCCGCCTGCCGCCCGACTGCGAGGACTCGTCGCCGACTACACGGC
CTGGCACGCCCGATCGCATGTGCAGGCGCGCGTGCTGCAGTACGAGTTCGCGGCACTCCTTCCGGAGCACGCCGAGCAGA
TCGCCGCGATCCGCGGTGCCATCGAGGCGATGTTCCAAGGTGCCATCACCGACGGCGTGGATGCGGGCATCTTCCGCATC
GACGACGTCAAGATGACCAGTCTCGCGCTCCTGTCGCTCGGGATCGACGTCGCCCGCTGGTTCCGCCCGGGCGGAGCTCG
CTCGCCGGACGAGATCGGCAACTACTACGGAGAGATCGCGCTGCGGGTCTGCGGTCACCCCGGCGATCTCTGA

Upstream 100 bases:

>100_bases
CGCTGCTACCGTTTTGGTTTCTAAGCGCTCGCTTAGAAACTTCCGAGCTTAGATAACATGACGAACCAGCTCGCCGTCAA
GAGATCGGTACGAACGGCCC

Downstream 100 bases:

>100_bases
CTGGACACGTATCGCCCGACACCACGACCTCCTCGCGGCGTTCAAGGCATGGCGGTCACGACCCGTTGAGCCCGGTGACC
CGGATTCCGGAGTGGGTCTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MISTTRTSGSPTPRANARGERARLRLLDAALSAFATQGFHGTSTRDIAEAAAMSPAAVYVHYRTKEELLFQLSLHGHREI
RRVVETALGRPEPPAARLRGLVADYTAWHARSHVQARVLQYEFAALLPEHAEQIAAIRGAIEAMFQGAITDGVDAGIFRI
DDVKMTSLALLSLGIDVARWFRPGGARSPDEIGNYYGEIALRVCGHPGDL

Sequences:

>Translated_210_residues
MISTTRTSGSPTPRANARGERARLRLLDAALSAFATQGFHGTSTRDIAEAAAMSPAAVYVHYRTKEELLFQLSLHGHREI
RRVVETALGRPEPPAARLRGLVADYTAWHARSHVQARVLQYEFAALLPEHAEQIAAIRGAIEAMFQGAITDGVDAGIFRI
DDVKMTSLALLSLGIDVARWFRPGGARSPDEIGNYYGEIALRVCGHPGDL
>Mature_210_residues
MISTTRTSGSPTPRANARGERARLRLLDAALSAFATQGFHGTSTRDIAEAAAMSPAAVYVHYRTKEELLFQLSLHGHREI
RRVVETALGRPEPPAARLRGLVADYTAWHARSHVQARVLQYEFAALLPEHAEQIAAIRGAIEAMFQGAITDGVDAGIFRI
DDVKMTSLALLSLGIDVARWFRPGGARSPDEIGNYYGEIALRVCGHPGDL

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22870; Mature: 22870

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTTRTSGSPTPRANARGERARLRLLDAALSAFATQGFHGTSTRDIAEAAAMSPAAVYV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEE
HYRTKEELLFQLSLHGHREIRRVVETALGRPEPPAARLRGLVADYTAWHARSHVQARVLQ
EEECHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEFAALLPEHAEQIAAIRGAIEAMFQGAITDGVDAGIFRIDDVKMTSLALLSLGIDVARW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHH
FRPGGARSPDEIGNYYGEIALRVCGHPGDL
HCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MISTTRTSGSPTPRANARGERARLRLLDAALSAFATQGFHGTSTRDIAEAAAMSPAAVYV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEE
HYRTKEELLFQLSLHGHREIRRVVETALGRPEPPAARLRGLVADYTAWHARSHVQARVLQ
EEECHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEFAALLPEHAEQIAAIRGAIEAMFQGAITDGVDAGIFRIDDVKMTSLALLSLGIDVARW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHH
FRPGGARSPDEIGNYYGEIALRVCGHPGDL
HCCCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA