Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119715023
Identifier: 119715023
GI number: 119715023
Start: 819959
End: 820690
Strand: Reverse
Name: 119715023
Synonym: Noca_0776
Alternate gene names: NA
Gene position: 820690-819959 (Counterclockwise)
Preceding gene: 119715025
Following gene: 119715022
Centisome position: 16.46
GC content: 76.78
Gene sequence:
>732_bases ATGGCGCACCTGTTCGTGCCGAGCCGCTTCTGCGGCCCACCGTCCTCGGGCAACGGCGGCTGGACCTCCGGCGCGCTCGC GGGGCTGACCGGGATCGATCCCGCCGCGGGGGTCTCGGTCTCGCTGCGCCGGCCGCCGCCACTGGACACCCCGATGCCGG TCGCGACGACCGGTGCGGTGACCGCCGCGTCCCTGGGCGACGAGGTCATCGCCCGGGCCGAGCCGGTCGAGCCGGGCGGG GCGGCCCCGCCGCTGGCCGAGCCGGTCCCACCGGCCGAGGCCCGCGCCGCGGAGACGTCGTACGCCGGGCTGTCCTTCCA CCCGTTCCCCACCTGCTTCGCGTGCGGGGTCAGCCGGACCGAGGGCGACGGCCTGCGGATCTTCCCCGGCCGGGTGACCG ACCAGGACGGCGCCGCCCGGGTCGCCGCGACGTGGACGCCCGACCCGTCGGTCGGCGCGGACGGACACGTGACGCTGCCG GTCACGTGGGCCGCGCTCGACTGCGTCGGCGGGTGGGCCGGCGACCTCGAGGAGCGGCTGATGGTGCTGGTCCGGATGGC CGCATGGGTGGACGCGATCCCTCAGGTCGGCGAGGAGCACGTCGTCGTCGGGCTGGCCCGTGGCAGCGAGGGTCGCAAGA CGTTCACGGCGTCCACGCTGTACGACGCCGACGGCCGGGTGGTCGCCCGCGCCGAGCACCTGTGGGTGGCCGTGGATCCC GCGGACCTCTGA
Upstream 100 bases:
>100_bases GGATCGAGACCGGCGCCCGGCGCCGCTCGCGAGCGGGTGTCGACGCCGGAGGCATCGTCTGGCACCGTGATGGCCCTCGA TCCGGAGTCGGAAGGACCCC
Downstream 100 bases:
>100_bases GGCCTCCACTAGGATGGCCGGCATGGATTTGAACGATCAAACCCACGGTGCGGGACCGGAGTGGTGGCGGCACGCGGTGA CCTACCAGATCTACGTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MAHLFVPSRFCGPPSSGNGGWTSGALAGLTGIDPAAGVSVSLRRPPPLDTPMPVATTGAVTAASLGDEVIARAEPVEPGG AAPPLAEPVPPAEARAAETSYAGLSFHPFPTCFACGVSRTEGDGLRIFPGRVTDQDGAARVAATWTPDPSVGADGHVTLP VTWAALDCVGGWAGDLEERLMVLVRMAAWVDAIPQVGEEHVVVGLARGSEGRKTFTASTLYDADGRVVARAEHLWVAVDP ADL
Sequences:
>Translated_243_residues MAHLFVPSRFCGPPSSGNGGWTSGALAGLTGIDPAAGVSVSLRRPPPLDTPMPVATTGAVTAASLGDEVIARAEPVEPGG AAPPLAEPVPPAEARAAETSYAGLSFHPFPTCFACGVSRTEGDGLRIFPGRVTDQDGAARVAATWTPDPSVGADGHVTLP VTWAALDCVGGWAGDLEERLMVLVRMAAWVDAIPQVGEEHVVVGLARGSEGRKTFTASTLYDADGRVVARAEHLWVAVDP ADL >Mature_242_residues AHLFVPSRFCGPPSSGNGGWTSGALAGLTGIDPAAGVSVSLRRPPPLDTPMPVATTGAVTAASLGDEVIARAEPVEPGGA APPLAEPVPPAEARAAETSYAGLSFHPFPTCFACGVSRTEGDGLRIFPGRVTDQDGAARVAATWTPDPSVGADGHVTLPV TWAALDCVGGWAGDLEERLMVLVRMAAWVDAIPQVGEEHVVVGLARGSEGRKTFTASTLYDADGRVVARAEHLWVAVDPA DL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24908; Mature: 24777
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHLFVPSRFCGPPSSGNGGWTSGALAGLTGIDPAAGVSVSLRRPPPLDTPMPVATTGAV CCEEECCHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCE TAASLGDEVIARAEPVEPGGAAPPLAEPVPPAEARAAETSYAGLSFHPFPTCFACGVSRT EHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCHHHHCCCCCC EGDGLRIFPGRVTDQDGAARVAATWTPDPSVGADGHVTLPVTWAALDCVGGWAGDLEERL CCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEHEEHHHHCCCCCCHHHHH MVLVRMAAWVDAIPQVGEEHVVVGLARGSEGRKTFTASTLYDADGRVVARAEHLWVAVDP HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEEEEEECC ADL CCC >Mature Secondary Structure AHLFVPSRFCGPPSSGNGGWTSGALAGLTGIDPAAGVSVSLRRPPPLDTPMPVATTGAV CEEECCHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCE TAASLGDEVIARAEPVEPGGAAPPLAEPVPPAEARAAETSYAGLSFHPFPTCFACGVSRT EHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCHHHHCCCCCC EGDGLRIFPGRVTDQDGAARVAATWTPDPSVGADGHVTLPVTWAALDCVGGWAGDLEERL CCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEHEEHHHHCCCCCCHHHHH MVLVRMAAWVDAIPQVGEEHVVVGLARGSEGRKTFTASTLYDADGRVVARAEHLWVAVDP HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEEEEEECC ADL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA