| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714997
Identifier: 119714997
GI number: 119714997
Start: 797319
End: 797609
Strand: Reverse
Name: 119714997
Synonym: Noca_0750
Alternate gene names: NA
Gene position: 797609-797319 (Counterclockwise)
Preceding gene: 119714998
Following gene: 119714996
Centisome position: 16.0
GC content: 65.29
Gene sequence:
>291_bases ATGATCACACTCAGGCGACTCTCGGGAACGGTGTTCGCGCTCAACTCCGACCTGATCGAGCGCGTCGACTCCACGCCGGA CACTGTGGTCACCCTGGTCGACGGCAAGAAGTACGTCGTCATCGACACCCTCGAGGAAGTGGTCGCGGCGGTCAGGTACT ACCGCGGCGAGGTCCTCGCGCTGAGCTCGTTCATCGACATCGAACCGTGGTCCCAGGAGCGCCCGAAGCTGGGCACGGTC ACCGAGCACCCGGCGGCGCACCTGAGCCGGATCAACCGAGCTGACGCCTGA
Upstream 100 bases:
>100_bases GCGGTGCGCCCGGACCGCTCAGGTCCGGGCGCCCGACGCCGATGGAAACACTGCGAGCGCCACGGACGGCTGCTCGGAAC GGCCCAAGGACGGTGCACAC
Downstream 100 bases:
>100_bases TGGACCCGGCAACCCTGATCGGGGTCCTCGTCGCGTTCATCGTCGTCGTGGTGGTGAACATGCTCGAGGGCGGCAACCCC ATGTCCCTCATGCTGCTCCC
Product: flagellar FlbD family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MITLRRLSGTVFALNSDLIERVDSTPDTVVTLVDGKKYVVIDTLEEVVAAVRYYRGEVLALSSFIDIEPWSQERPKLGTV TEHPAAHLSRINRADA
Sequences:
>Translated_96_residues MITLRRLSGTVFALNSDLIERVDSTPDTVVTLVDGKKYVVIDTLEEVVAAVRYYRGEVLALSSFIDIEPWSQERPKLGTV TEHPAAHLSRINRADA >Mature_96_residues MITLRRLSGTVFALNSDLIERVDSTPDTVVTLVDGKKYVVIDTLEEVVAAVRYYRGEVLALSSFIDIEPWSQERPKLGTV TEHPAAHLSRINRADA
Specific function: Unknown
COG id: COG1582
COG function: function code N; Uncharacterized protein, possibly involved in motility
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10697; Mature: 10697
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLRRLSGTVFALNSDLIERVDSTPDTVVTLVDGKKYVVIDTLEEVVAAVRYYRGEVLA CEEEECCCCEEEEECHHHHHHCCCCCCEEEEEECCCEEEEEECHHHHHHHHHHHCCCEEE LSSFIDIEPWSQERPKLGTVTEHPAAHLSRINRADA EECEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MITLRRLSGTVFALNSDLIERVDSTPDTVVTLVDGKKYVVIDTLEEVVAAVRYYRGEVLA CEEEECCCCEEEEECHHHHHHCCCCCCEEEEEECCCEEEEEECHHHHHHHHHHHCCCEEE LSSFIDIEPWSQERPKLGTVTEHPAAHLSRINRADA EECEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA