| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is serC
Identifier: 119714977
GI number: 119714977
Start: 778281
End: 779405
Strand: Reverse
Name: serC
Synonym: Noca_0730
Alternate gene names: 119714977
Gene position: 779405-778281 (Counterclockwise)
Preceding gene: 119714980
Following gene: 119714970
Centisome position: 15.63
GC content: 71.73
Gene sequence:
>1125_bases ATGACCGACGCCCTGCAGATCCCCCGCGACCTGCTCCCCGCCGACGGCCGGTTCGGAGCCGGACCGTCGAAGATCCAGAC CGCCCACCTCGACGCGCTCGCCGCGACCGGATCGACGCTGATGGGTACGTCGCATCGCCAGGCGCCCGTGCGCGACCTGG TCGGCCGGGTCCGCAGCGGCCTGGCCGAGCTGTTCTCCCTGCCCGACGGCTACCAGGTGGTGCTCGGCAACGGCGGCGCG ACCGCGTTCTGGGACATCGCGACGTACGGGCTGATCCAGGAGCGGAGCCAGCACCTGACGTTCGGCGAGTTCTCCTCGAA GTTCGCCAAGGCCGCGAAGGCCGCCCCGTGGCTCGCGGACCCGTCGGTGATCGCGTCCGAGCCGGGCTCGCGGCCCGCCC CCGTCGCCGAGGACGGCGTCGACGCCTACGCCTGGGCGCACAACGAGACGTCGACCGCGGTGATGGCGCCCGTCGTACGC CCCGCCGGCACGTCGTCGGACAGCTCGCTGGTGCTCGTCGACGCGACCTCGGGCGCGGGTGGACTTCCGGTCGACCTGCG CGAGGTCGACGTCTACTACTTCGCTCCCCAGAAGTGCTTCGCCTCCGACGGCGGGCTGTGGATCGCGCTGTTCTCCCCCG CCGCCCTCGAGCGGGCGGCCACGGTGGCCGCCTCCGGCCGGCACATCCCGGCGTTCTTCGACCTGCCGACCGCGATCGAC AACTCGGCGAAGAACCAGACCTACAACACCCCGGCCGTCGCGACGCTGTTCCTCATGGCCGAGCAGCTCGACTGGATGAA CGCCTCCGGCGGGCTCGACGGCATGGTCGCGCGTACGACGGAGTCCTCGGACACGCTCTACACGTGGGCGGAGAAGTCGC CGTACGCCTTCCCGTACGTCACCGACCCGGACCACCGCTCGCTGGTGATCGGCACCATCGACTTCGAGGACGGCATCGAC GCCGCCCGGGTGGCCGCCGTGCTGCGCGCCAACGGGGTCGTCGACACCGAGCCGTACCGCAAGCTCGGGCGCAACCAGCT GCGGATCGCGATGTACCCCGCCGTCGACCCCGCCGACGTCGAGGCCCTCACCCGCTCCATCGACTGGGTGGTCGACCACC TCTGA
Upstream 100 bases:
>100_bases TCATCTGGACTCCTCGAGCAACGTCTGCGACGGCAGTGACACAATAGGGCCGCTGACAGCGTGGTCAGGAACTCCACCGA TCCACCCTGGAAGGTTGTCC
Downstream 100 bases:
>100_bases CGCGTTGAGTCGGGACTCACGACTCGACGTGGAGGGCGGCGCGGACCAGCTCGTACGTCGCCGCATCGAACGCCACGATC CGGGCCTCGGTGACGGCGGT
Product: phosphoserine aminotransferase
Products: NA
Alternate protein names: Phosphohydroxythreonine aminotransferase; PSAT
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MTDALQIPRDLLPADGRFGAGPSKIQTAHLDALAATGSTLMGTSHRQAPVRDLVGRVRSGLAELFSLPDGYQVVLGNGGA TAFWDIATYGLIQERSQHLTFGEFSSKFAKAAKAAPWLADPSVIASEPGSRPAPVAEDGVDAYAWAHNETSTAVMAPVVR PAGTSSDSSLVLVDATSGAGGLPVDLREVDVYYFAPQKCFASDGGLWIALFSPAALERAATVAASGRHIPAFFDLPTAID NSAKNQTYNTPAVATLFLMAEQLDWMNASGGLDGMVARTTESSDTLYTWAEKSPYAFPYVTDPDHRSLVIGTIDFEDGID AARVAAVLRANGVVDTEPYRKLGRNQLRIAMYPAVDPADVEALTRSIDWVVDHL
Sequences:
>Translated_374_residues MTDALQIPRDLLPADGRFGAGPSKIQTAHLDALAATGSTLMGTSHRQAPVRDLVGRVRSGLAELFSLPDGYQVVLGNGGA TAFWDIATYGLIQERSQHLTFGEFSSKFAKAAKAAPWLADPSVIASEPGSRPAPVAEDGVDAYAWAHNETSTAVMAPVVR PAGTSSDSSLVLVDATSGAGGLPVDLREVDVYYFAPQKCFASDGGLWIALFSPAALERAATVAASGRHIPAFFDLPTAID NSAKNQTYNTPAVATLFLMAEQLDWMNASGGLDGMVARTTESSDTLYTWAEKSPYAFPYVTDPDHRSLVIGTIDFEDGID AARVAAVLRANGVVDTEPYRKLGRNQLRIAMYPAVDPADVEALTRSIDWVVDHL >Mature_373_residues TDALQIPRDLLPADGRFGAGPSKIQTAHLDALAATGSTLMGTSHRQAPVRDLVGRVRSGLAELFSLPDGYQVVLGNGGAT AFWDIATYGLIQERSQHLTFGEFSSKFAKAAKAAPWLADPSVIASEPGSRPAPVAEDGVDAYAWAHNETSTAVMAPVVRP AGTSSDSSLVLVDATSGAGGLPVDLREVDVYYFAPQKCFASDGGLWIALFSPAALERAATVAASGRHIPAFFDLPTAIDN SAKNQTYNTPAVATLFLMAEQLDWMNASGGLDGMVARTTESSDTLYTWAEKSPYAFPYVTDPDHRSLVIGTIDFEDGIDA ARVAAVLRANGVVDTEPYRKLGRNQLRIAMYPAVDPADVEALTRSIDWVVDHL
Specific function: Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
COG id: COG1932
COG function: function code HE; Phosphoserine aminotransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SERC_NOCSJ (A1SEM0)
Other databases:
- EMBL: CP000509 - RefSeq: YP_921942.1 - ProteinModelPortal: A1SEM0 - SMR: A1SEM0 - STRING: A1SEM0 - GeneID: 4599834 - GenomeReviews: CP000509_GR - KEGG: nca:Noca_0730 - eggNOG: COG1932 - HOGENOM: HBG292317 - OMA: SHRAKVG - ProtClustDB: PRK03080 - BioCyc: NSP35761:NOCA_0730-MONOMER - GO: GO:0005737 - HAMAP: MF_00160 - InterPro: IPR000192 - InterPro: IPR022278 - InterPro: IPR006272 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - PIRSF: PIRSF000525 - TIGRFAMs: TIGR01366
Pfam domain/function: PF00266 Aminotran_5; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.52
Molecular weight: Translated: 39758; Mature: 39627
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00595 AA_TRANSFER_CLASS_5
Important sites: BINDING 46-46 BINDING 104-104 BINDING 150-150 BINDING 174-174 BINDING 197-197
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDALQIPRDLLPADGRFGAGPSKIQTAHLDALAATGSTLMGTSHRQAPVRDLVGRVRSG CCCHHHCCHHHCCCCCCCCCCCHHEEHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHH LAELFSLPDGYQVVLGNGGATAFWDIATYGLIQERSQHLTFGEFSSKFAKAAKAAPWLAD HHHHHCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC PSVIASEPGSRPAPVAEDGVDAYAWAHNETSTAVMAPVVRPAGTSSDSSLVLVDATSGAG CCCEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCC GLPVDLREVDVYYFAPQKCFASDGGLWIALFSPAALERAATVAASGRHIPAFFDLPTAID CCCEEHEEEEEEEECCHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEECCCHHHC NSAKNQTYNTPAVATLFLMAEQLDWMNASGGLDGMVARTTESSDTLYTWAEKSPYAFPYV CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEECCCCEECCCC TDPDHRSLVIGTIDFEDGIDAARVAAVLRANGVVDTEPYRKLGRNQLRIAMYPAVDPADV CCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEECCCCCHHH EALTRSIDWVVDHL HHHHHHHHHHHHCC >Mature Secondary Structure TDALQIPRDLLPADGRFGAGPSKIQTAHLDALAATGSTLMGTSHRQAPVRDLVGRVRSG CCHHHCCHHHCCCCCCCCCCCHHEEHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHH LAELFSLPDGYQVVLGNGGATAFWDIATYGLIQERSQHLTFGEFSSKFAKAAKAAPWLAD HHHHHCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC PSVIASEPGSRPAPVAEDGVDAYAWAHNETSTAVMAPVVRPAGTSSDSSLVLVDATSGAG CCCEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCC GLPVDLREVDVYYFAPQKCFASDGGLWIALFSPAALERAATVAASGRHIPAFFDLPTAID CCCEEHEEEEEEEECCHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEECCCHHHC NSAKNQTYNTPAVATLFLMAEQLDWMNASGGLDGMVARTTESSDTLYTWAEKSPYAFPYV CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEECCCCEECCCC TDPDHRSLVIGTIDFEDGIDAARVAAVLRANGVVDTEPYRKLGRNQLRIAMYPAVDPADV CCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEECCCCCHHH EALTRSIDWVVDHL HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA