| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714915
Identifier: 119714915
GI number: 119714915
Start: 708400
End: 709230
Strand: Reverse
Name: 119714915
Synonym: Noca_0667
Alternate gene names: NA
Gene position: 709230-708400 (Counterclockwise)
Preceding gene: 119714917
Following gene: 119714909
Centisome position: 14.22
GC content: 77.26
Gene sequence:
>831_bases GTGATCGAAAAATCGGCTGAGCCGGTCGCTTTCTACCGGCACAGCGACCGTTTCGCGGGTCCGTCCGACGGGCCGGTCGA GGCCTTCGAGTCGCTGCCGACGACCGCCGGGCCGTGGTCCCCCGACGCCCAGCACGGCGGCCCGCCCGCGGCGCTGCTGG CGCGCGCGATCGAGCGGCTCCCGGCCGCCGGGGGCGGTCGGGTCGGCCGGTTCACGATGGAGCTGCTCGGGCCGGTGCCG GTCGGGCCGGTGGCGGTCTCGGCGCGCGTGGTGCGGCCGGGGCGGTCGGTGCAGCTCGCGGCCGCCGAGCTCCACGACGT GGCCCGGGGCCGGGTCGCCGCCACCGCGGCGGCCTGGTTGTTCCCCCGGACCGCAGGACCGGGTGCCGGCCCGGCCCCGC TGCCGCACACGCCGGCCGACGGCGTCGCACACCCCCGGCCGGAGGCCTGGCACGGCGGCTACCTCGACGCGATCGAGTGG CGATGGGTGAGCGGCGGGCTCGAGGTCCCCGGCCGCGGGGTGGTGTGGATGCGGCCGCCGGCACTGGTCGAGGGCGAGCC GATCAGCCCGGTGCAGCGACTGCTGGCGTGCGTCGACTCGGCCTCCGGCGCGAGCGCCGCCCTCGACGTGCGCGAGTGGG GGTTCTTGAACACCGAGCTGACCGTGCACGTGCTGCGCGAGCCGGCGGGCGAGTGGGTGTGCCTGGACGCGGAGACCACC CTGTCCGACGGGTCGGTCGGGGTCGCCACCTCCGCGACGTACGACGAGCGCGGCCTGGTCGCCCGGTCGGCGCAGGCGCT GCTCGTCGTACCGCGCTCGGTCAGTCCGTGA
Upstream 100 bases:
>100_bases CCCTTTACGGAATCGAACCGTAGACCTTCTCCTTACCATGGAGACGCTCTGCCGACTGAGCTAAAGGGGCAACGACGCAG AACAATACACAGGGGGACGG
Downstream 100 bases:
>100_bases TCCGCGGCCAGGGCGCCGCCTCCTCGAGCTCGTAGGCGAGCTCGAGGAGCGTCGACTCGCGGCCGGCTCCGGCGGAGAGC ATCATCCCCTGCGGCATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MIEKSAEPVAFYRHSDRFAGPSDGPVEAFESLPTTAGPWSPDAQHGGPPAALLARAIERLPAAGGGRVGRFTMELLGPVP VGPVAVSARVVRPGRSVQLAAAELHDVARGRVAATAAAWLFPRTAGPGAGPAPLPHTPADGVAHPRPEAWHGGYLDAIEW RWVSGGLEVPGRGVVWMRPPALVEGEPISPVQRLLACVDSASGASAALDVREWGFLNTELTVHVLREPAGEWVCLDAETT LSDGSVGVATSATYDERGLVARSAQALLVVPRSVSP
Sequences:
>Translated_276_residues MIEKSAEPVAFYRHSDRFAGPSDGPVEAFESLPTTAGPWSPDAQHGGPPAALLARAIERLPAAGGGRVGRFTMELLGPVP VGPVAVSARVVRPGRSVQLAAAELHDVARGRVAATAAAWLFPRTAGPGAGPAPLPHTPADGVAHPRPEAWHGGYLDAIEW RWVSGGLEVPGRGVVWMRPPALVEGEPISPVQRLLACVDSASGASAALDVREWGFLNTELTVHVLREPAGEWVCLDAETT LSDGSVGVATSATYDERGLVARSAQALLVVPRSVSP >Mature_276_residues MIEKSAEPVAFYRHSDRFAGPSDGPVEAFESLPTTAGPWSPDAQHGGPPAALLARAIERLPAAGGGRVGRFTMELLGPVP VGPVAVSARVVRPGRSVQLAAAELHDVARGRVAATAAAWLFPRTAGPGAGPAPLPHTPADGVAHPRPEAWHGGYLDAIEW RWVSGGLEVPGRGVVWMRPPALVEGEPISPVQRLLACVDSASGASAALDVREWGFLNTELTVHVLREPAGEWVCLDAETT LSDGSVGVATSATYDERGLVARSAQALLVVPRSVSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28729; Mature: 28729
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEKSAEPVAFYRHSDRFAGPSDGPVEAFESLPTTAGPWSPDAQHGGPPAALLARAIERL CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHC PAAGGGRVGRFTMELLGPVPVGPVAVSARVVRPGRSVQLAAAELHDVARGRVAATAAAWL CCCCCCCHHEEHHHHHCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHCCHHHHHHHHHH FPRTAGPGAGPAPLPHTPADGVAHPRPEAWHGGYLDAIEWRWVSGGLEVPGRGVVWMRPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCC ALVEGEPISPVQRLLACVDSASGASAALDVREWGFLNTELTVHVLREPAGEWVCLDAETT CCCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCEEEEEEECCCCCEEEECCCCC LSDGSVGVATSATYDERGLVARSAQALLVVPRSVSP CCCCCCEEEECCCCCCCCCHHCCCCEEEEECCCCCC >Mature Secondary Structure MIEKSAEPVAFYRHSDRFAGPSDGPVEAFESLPTTAGPWSPDAQHGGPPAALLARAIERL CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHC PAAGGGRVGRFTMELLGPVPVGPVAVSARVVRPGRSVQLAAAELHDVARGRVAATAAAWL CCCCCCCHHEEHHHHHCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHCCHHHHHHHHHH FPRTAGPGAGPAPLPHTPADGVAHPRPEAWHGGYLDAIEWRWVSGGLEVPGRGVVWMRPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCC ALVEGEPISPVQRLLACVDSASGASAALDVREWGFLNTELTVHVLREPAGEWVCLDAETT CCCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCEEEEEEECCCCCEEEECCCCC LSDGSVGVATSATYDERGLVARSAQALLVVPRSVSP CCCCCCEEEECCCCCCCCCHHCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA