Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119714909

Identifier: 119714909

GI number: 119714909

Start: 700424

End: 701272

Strand: Reverse

Name: 119714909

Synonym: Noca_0661

Alternate gene names: NA

Gene position: 701272-700424 (Counterclockwise)

Preceding gene: 119714915

Following gene: 119714907

Centisome position: 14.07

GC content: 69.02

Gene sequence:

>849_bases
ATGTCGACGAACGAACCCCCACCCCCCGACCAGGCCCCTCCTCCGCCACTGCCACCGCCATCGGGCGACGGCTACGGCGG
GCCGCCACCGCCGACCGGCGGGTACGGCGAGAACCCGCCGCCGCCCCCGCCCGCCCCGTCGTACGGCGGTGGCGACGGCA
GCGGCTACAGCCTCGGCAACGCCTTGTCCTACGGCTGGGCGAAGTTCCAGGCGAACACCGCCCAGATCATCCTGTCCGCC
GTGGTCCTGGTCGTCGCCCTGGTCGTGGTCGCCGTCCTCGGCACCTTCGTGATGAACGCGCTGACCACGGATGCGTCGTG
CTCGGTGCAGAACGGCTCGCTCACCTGTGACGACGGCACCGGCTTCTTCGGCCGGCTGATCCTGCAGTCGCTGCTGTCGG
CCGTGCTGCTGGTCGTCGCCTGGATCATCGGCGCCGGCCTGGTCCGGGCCTCGCTCAACGTCACCGCGGGCCGGCCGTTC
CTGTTCGCGGACGTCATCAAGACCGACAACCTCGGGTCGGTGGTGGTTGCCAGCGTGATCATCGCGGTCGCCACGTTCGT
CGGCACGATCCTGTGCTACCTGCCCGGCCTGGTGGTCGGGTTCGCGACGTCGTACACGCTGTTCTTCATCATCGACAAGA
ACATGGCGCCGGTCGACGCGATCAAGGCGAGCGTGCTGTTCGTGAAGGACAACCTCGCAGCCACGATCGTCTGGTACATC
GTCGGCGGCCTGGTCGCCGCGGTCGGGTTCGTGATCTGCGTGGTCGGTGCGCTGGTCAGCGTGCCGGTCGTGCTACTCGG
CACGGCGTACACCTACAAGACGCTCAACCGCGAGCCGGTCGCGCCGTAG

Upstream 100 bases:

>100_bases
TCGGGCCGTTGCCAATAGTCCGGTTGAGCCTGTCCCTGCGGGGCGCGGGACCGCTAGGTTGCGAACTGCCAGCCCTGCGG
ATGAGATCCAGGAGCACCGG

Downstream 100 bases:

>100_bases
CGCGGGCCCGTCAGACCAGCTCGAGGCGCAGCCGCGCCGGGTCCCCCACCTCGAGGGACTCGGCGCGGCGCACCGCCTTC
TTGACCGGTAGGACGTAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSTNEPPPPDQAPPPPLPPPSGDGYGGPPPPTGGYGENPPPPPPAPSYGGGDGSGYSLGNALSYGWAKFQANTAQIILSA
VVLVVALVVVAVLGTFVMNALTTDASCSVQNGSLTCDDGTGFFGRLILQSLLSAVLLVVAWIIGAGLVRASLNVTAGRPF
LFADVIKTDNLGSVVVASVIIAVATFVGTILCYLPGLVVGFATSYTLFFIIDKNMAPVDAIKASVLFVKDNLAATIVWYI
VGGLVAAVGFVICVVGALVSVPVVLLGTAYTYKTLNREPVAP

Sequences:

>Translated_282_residues
MSTNEPPPPDQAPPPPLPPPSGDGYGGPPPPTGGYGENPPPPPPAPSYGGGDGSGYSLGNALSYGWAKFQANTAQIILSA
VVLVVALVVVAVLGTFVMNALTTDASCSVQNGSLTCDDGTGFFGRLILQSLLSAVLLVVAWIIGAGLVRASLNVTAGRPF
LFADVIKTDNLGSVVVASVIIAVATFVGTILCYLPGLVVGFATSYTLFFIIDKNMAPVDAIKASVLFVKDNLAATIVWYI
VGGLVAAVGFVICVVGALVSVPVVLLGTAYTYKTLNREPVAP
>Mature_281_residues
STNEPPPPDQAPPPPLPPPSGDGYGGPPPPTGGYGENPPPPPPAPSYGGGDGSGYSLGNALSYGWAKFQANTAQIILSAV
VLVVALVVVAVLGTFVMNALTTDASCSVQNGSLTCDDGTGFFGRLILQSLLSAVLLVVAWIIGAGLVRASLNVTAGRPFL
FADVIKTDNLGSVVVASVIIAVATFVGTILCYLPGLVVGFATSYTLFFIIDKNMAPVDAIKASVLFVKDNLAATIVWYIV
GGLVAAVGFVICVVGALVSVPVVLLGTAYTYKTLNREPVAP

Specific function: Unknown

COG id: COG5473

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018692 [H]

Pfam domain/function: PF09955 DUF2189 [H]

EC number: NA

Molecular weight: Translated: 28761; Mature: 28630

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNEPPPPDQAPPPPLPPPSGDGYGGPPPPTGGYGENPPPPPPAPSYGGGDGSGYSLGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
ALSYGWAKFQANTAQIILSAVVLVVALVVVAVLGTFVMNALTTDASCSVQNGSLTCDDGT
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEECCCC
GFFGRLILQSLLSAVLLVVAWIIGAGLVRASLNVTAGRPFLFADVIKTDNLGSVVVASVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHH
IAVATFVGTILCYLPGLVVGFATSYTLFFIIDKNMAPVDAIKASVLFVKDNLAATIVWYI
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHEEEEEECCHHHHHHHHH
VGGLVAAVGFVICVVGALVSVPVVLLGTAYTYKTLNREPVAP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
STNEPPPPDQAPPPPLPPPSGDGYGGPPPPTGGYGENPPPPPPAPSYGGGDGSGYSLGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
ALSYGWAKFQANTAQIILSAVVLVVALVVVAVLGTFVMNALTTDASCSVQNGSLTCDDGT
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEECCCC
GFFGRLILQSLLSAVLLVVAWIIGAGLVRASLNVTAGRPFLFADVIKTDNLGSVVVASVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHH
IAVATFVGTILCYLPGLVVGFATSYTLFFIIDKNMAPVDAIKASVLFVKDNLAATIVWYI
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHEEEEEECCHHHHHHHHH
VGGLVAAVGFVICVVGALVSVPVVLLGTAYTYKTLNREPVAP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]