| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is cutM [H]
Identifier: 119714863
GI number: 119714863
Start: 641554
End: 642441
Strand: Reverse
Name: cutM [H]
Synonym: Noca_0607
Alternate gene names: 119714863
Gene position: 642441-641554 (Counterclockwise)
Preceding gene: 119714864
Following gene: 119714862
Centisome position: 12.89
GC content: 63.29
Gene sequence:
>888_bases GTGAAGCCACCGCCTTTCGAGTACGTGGTCGCCACATCAGTGGACCACGCGATCGAACTTGTCTGCTCCGATGAGGACGC GAAGTTCATCGCCGGCGGGCAGAGCCTCATCCCGCTGCTCAGCTTGCGGTTTGCGAGTCCCACGCTGTTGGTAGATGTCT CCCGACTCACCGAGCTTCGCGACGTGCGTCGAGTAGGTGAGGTGCTGCGTATCGGAGCGCTGACTCGGCACGCAGAGATC CAAAGGCTGACCATATTCAGACAGGACGCTCCGCTACTCTCAACGGCTGCAGGCTGGGTCGCCCACTCACAGGTGCGCAA TCGAGGGACGTTCGGTGGAGCGATTGCCCACAGTGACAGCGCTGCCGAGTTCCCGGCGGTGCTCCTCGCGACTGGAGCCA CCATCGTCGCCCGATCTCGCGACGGGGAACGACGCATCCCGTGCCAAGATTTCTTCGGCTCCCACTTTCAGACTGCCCTC AACCATGGCGAACTCCTGACAGGTGTCGAGGTCCCTGCACACGATGCTTCCACCAAGTGGGGATTCTCGGAGTTCGCGCG CCGTAAAGGTGACTACGCCATCGGCGGGGCAGCAGTCAGTGTCCGCCTCGACGAACAGGGACGCTGCACACGGGTGCGCG CGGGTCTGATTGCGGCGGGCCCTGGACCCACCTCGGCCAAGGGCCTCGATGAGGTTCTGGTCGACCGAATAGTCGACGAG TCGGCCGTGTCCGATGCGGTTGCCCGCGCAGAGAGGTATCTCAGTCCGGAAAGCAACGTTCACGGGACGAAGGAGTATCG GCGCGCTGTCGTCGCGGAGTCACTACGTCGAGCTCTGCGCCAAGCGTTCGATCTGGACCGCGCCGGAACCGAGAGGAAAT CCGCATGA
Upstream 100 bases:
>100_bases GCTGGGACCAGACTGGTGTGATAGTCGAAACAGATCAGGCGCCGTAATTGGAACGCGCAACTGCGTCGGGACCGGCCGAC GTTCCACGAGAGGGATGCCC
Downstream 100 bases:
>100_bases AGACTCGTGTGACCGTAAACGGTGAAGGTTATGAGCGTGACGTCGAGCCACGCATGCTTCTATCGGACTTCTTGCGGCAC GAGCTGGGACTGACCGGCAC
Product: molybdopterin dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MKPPPFEYVVATSVDHAIELVCSDEDAKFIAGGQSLIPLLSLRFASPTLLVDVSRLTELRDVRRVGEVLRIGALTRHAEI QRLTIFRQDAPLLSTAAGWVAHSQVRNRGTFGGAIAHSDSAAEFPAVLLATGATIVARSRDGERRIPCQDFFGSHFQTAL NHGELLTGVEVPAHDASTKWGFSEFARRKGDYAIGGAAVSVRLDEQGRCTRVRAGLIAAGPGPTSAKGLDEVLVDRIVDE SAVSDAVARAERYLSPESNVHGTKEYRRAVVAESLRRALRQAFDLDRAGTERKSA
Sequences:
>Translated_295_residues MKPPPFEYVVATSVDHAIELVCSDEDAKFIAGGQSLIPLLSLRFASPTLLVDVSRLTELRDVRRVGEVLRIGALTRHAEI QRLTIFRQDAPLLSTAAGWVAHSQVRNRGTFGGAIAHSDSAAEFPAVLLATGATIVARSRDGERRIPCQDFFGSHFQTAL NHGELLTGVEVPAHDASTKWGFSEFARRKGDYAIGGAAVSVRLDEQGRCTRVRAGLIAAGPGPTSAKGLDEVLVDRIVDE SAVSDAVARAERYLSPESNVHGTKEYRRAVVAESLRRALRQAFDLDRAGTERKSA >Mature_295_residues MKPPPFEYVVATSVDHAIELVCSDEDAKFIAGGQSLIPLLSLRFASPTLLVDVSRLTELRDVRRVGEVLRIGALTRHAEI QRLTIFRQDAPLLSTAAGWVAHSQVRNRGTFGGAIAHSDSAAEFPAVLLATGATIVARSRDGERRIPCQDFFGSHFQTAL NHGELLTGVEVPAHDASTKWGFSEFARRKGDYAIGGAAVSVRLDEQGRCTRVRAGLIAAGPGPTSAKGLDEVLVDRIVDE SAVSDAVARAERYLSPESNVHGTKEYRRAVVAESLRRALRQAFDLDRAGTERKSA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1789231, Length=281, Percent_Identity=25.2669039145907, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 31880; Mature: 31880
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPPPFEYVVATSVDHAIELVCSDEDAKFIAGGQSLIPLLSLRFASPTLLVDVSRLTELR CCCCCCCEEEECCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHCCCHHEEEHHHHHHHH DVRRVGEVLRIGALTRHAEIQRLTIFRQDAPLLSTAAGWVAHSQVRNRGTFGGAIAHSDS HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCC AAEFPAVLLATGATIVARSRDGERRIPCQDFFGSHFQTALNHGELLTGVEVPAHDASTKW CHHCCHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC GFSEFARRKGDYAIGGAAVSVRLDEQGRCTRVRAGLIAAGPGPTSAKGLDEVLVDRIVDE CHHHHHHCCCCEEECCEEEEEEECCCCCEEEHHCCEEECCCCCCCHHHHHHHHHHHHHHH SAVSDAVARAERYLSPESNVHGTKEYRRAVVAESLRRALRQAFDLDRAGTERKSA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKPPPFEYVVATSVDHAIELVCSDEDAKFIAGGQSLIPLLSLRFASPTLLVDVSRLTELR CCCCCCCEEEECCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHCCCHHEEEHHHHHHHH DVRRVGEVLRIGALTRHAEIQRLTIFRQDAPLLSTAAGWVAHSQVRNRGTFGGAIAHSDS HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCC AAEFPAVLLATGATIVARSRDGERRIPCQDFFGSHFQTALNHGELLTGVEVPAHDASTKW CHHCCHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC GFSEFARRKGDYAIGGAAVSVRLDEQGRCTRVRAGLIAAGPGPTSAKGLDEVLVDRIVDE CHHHHHHCCCCEEECCEEEEEEECCCCCEEEHHCCEEECCCCCCCHHHHHHHHHHHHHHH SAVSDAVARAERYLSPESNVHGTKEYRRAVVAESLRRALRQAFDLDRAGTERKSA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]