| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is cutS [H]
Identifier: 119714862
GI number: 119714862
Start: 641063
End: 641557
Strand: Reverse
Name: cutS [H]
Synonym: Noca_0606
Alternate gene names: 119714862
Gene position: 641557-641063 (Counterclockwise)
Preceding gene: 119714863
Following gene: 119714861
Centisome position: 12.87
GC content: 62.63
Gene sequence:
>495_bases ATGAAGACTCGTGTGACCGTAAACGGTGAAGGTTATGAGCGTGACGTCGAGCCACGCATGCTTCTATCGGACTTCTTGCG GCACGAGCTGGGACTGACCGGCACCAACGTCGGTTGTGAGCACGGGGTGTGCGGCAGCTGCACCGTGCTTCTGGATGGCG AGCCCGTGCGGTCCTGCACCATGCTTGCGGTGCAATGCGACAGCCGGCGACTGACCACCGTCGAAGGCCTTGCCTGCGAC GAAAAGCTGCACGGGCTCCAAGATGCATTCTCCGCTTGCCACGGCCTCCAATGCGGCTTCTGCACGCCTGGGATGCTGAT GACCCTGCTGCCGATTTACAACGAGGCGCGTCGACTCAACGACGACGAAATCCGCGAGGCAATCTCCGGCAATCTGTGTC GCTGCACTGGGTACCAGCAGATCGTGGAGGCAGCCCGGAAGGCGCTCGGCGAGGCCGCCGACATGGCCGACCCCTGCGTC GAATCTCGAGCATGA
Upstream 100 bases:
>100_bases GGACGAAGGAGTATCGGCGCGCTGTCGTCGCGGAGTCACTACGTCGAGCTCTGCGCCAAGCGTTCGATCTGGACCGCGCC GGAACCGAGAGGAAATCCGC
Downstream 100 bases:
>100_bases TCGGGCACCGTGACTGGTTGCGGTCCCGGTTGTGCGTGAGTCACAAGTGCGAGCCAAACACTTCGACTCCTTCCGCTCTG GGCGATGTCCATCGGTCTAA
Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein
Products: NA
Alternate protein names: CO dehydrogenase subunit S; CO-DH S [H]
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKTRVTVNGEGYERDVEPRMLLSDFLRHELGLTGTNVGCEHGVCGSCTVLLDGEPVRSCTMLAVQCDSRRLTTVEGLACD EKLHGLQDAFSACHGLQCGFCTPGMLMTLLPIYNEARRLNDDEIREAISGNLCRCTGYQQIVEAARKALGEAADMADPCV ESRA
Sequences:
>Translated_164_residues MKTRVTVNGEGYERDVEPRMLLSDFLRHELGLTGTNVGCEHGVCGSCTVLLDGEPVRSCTMLAVQCDSRRLTTVEGLACD EKLHGLQDAFSACHGLQCGFCTPGMLMTLLPIYNEARRLNDDEIREAISGNLCRCTGYQQIVEAARKALGEAADMADPCV ESRA >Mature_164_residues MKTRVTVNGEGYERDVEPRMLLSDFLRHELGLTGTNVGCEHGVCGSCTVLLDGEPVRSCTMLAVQCDSRRLTTVEGLACD EKLHGLQDAFSACHGLQCGFCTPGMLMTLLPIYNEARRLNDDEIREAISGNLCRCTGYQQIVEAARKALGEAADMADPCV ESRA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI71773480, Length=152, Percent_Identity=37.5, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI91823271, Length=152, Percent_Identity=36.8421052631579, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1786480, Length=166, Percent_Identity=39.1566265060241, Blast_Score=117, Evalue=4e-28, Organism=Escherichia coli, GI1789232, Length=139, Percent_Identity=43.1654676258993, Blast_Score=110, Evalue=5e-26, Organism=Caenorhabditis elegans, GI32566215, Length=149, Percent_Identity=40.2684563758389, Blast_Score=120, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17539860, Length=149, Percent_Identity=39.5973154362416, Blast_Score=118, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17540638, Length=149, Percent_Identity=40.2684563758389, Blast_Score=118, Evalue=1e-27, Organism=Drosophila melanogaster, GI24647201, Length=155, Percent_Identity=34.1935483870968, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI24647193, Length=161, Percent_Identity=32.9192546583851, Blast_Score=95, Evalue=2e-20, Organism=Drosophila melanogaster, GI17737937, Length=159, Percent_Identity=37.7358490566038, Blast_Score=94, Evalue=4e-20, Organism=Drosophila melanogaster, GI24647199, Length=167, Percent_Identity=31.7365269461078, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24647195, Length=161, Percent_Identity=35.4037267080745, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI24647197, Length=161, Percent_Identity=35.4037267080745, Blast_Score=91, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 17845; Mature: 17845
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00639 THIOL_PROTEASE_HIS ; PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 11.0 %Cys+Met (Translated Protein) 7.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 11.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRVTVNGEGYERDVEPRMLLSDFLRHELGLTGTNVGCEHGVCGSCTVLLDGEPVRSCT CCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHE MLAVQCDSRRLTTVEGLACDEKLHGLQDAFSACHGLQCGFCTPGMLMTLLPIYNEARRLN EEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC DDEIREAISGNLCRCTGYQQIVEAARKALGEAADMADPCVESRA HHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTRVTVNGEGYERDVEPRMLLSDFLRHELGLTGTNVGCEHGVCGSCTVLLDGEPVRSCT CCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHE MLAVQCDSRRLTTVEGLACDEKLHGLQDAFSACHGLQCGFCTPGMLMTLLPIYNEARRLN EEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC DDEIREAISGNLCRCTGYQQIVEAARKALGEAADMADPCVESRA HHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]