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The map label for this gene is 119386527

Identifier: 119386527

GI number: 119386527

Start: 959832

End: 960182

Strand: Direct

Name: 119386527

Synonym: Pden_3820

Alternate gene names: NA

Gene position: 959832-960182 (Clockwise)

Preceding gene: 119386526

Following gene: 119386530

Centisome position: 55.48

GC content: 64.39

Gene sequence:

>351_bases
TTGCGACGTTTTGAACATTTCGCGGTCGGCGTCGCCAGTGGCTCGACCGAGATGTTTTCGGCCTTCGAGGATGGCGGGCC
GATGTGGACCGGGCAGGGCCCCCGGGTCGAGTCGCAGGCGATCCTATTCGACGAAAGTTTCGTCGAGCCGCCGGTGGTCC
ATGTTTCGCTGAGCATGTGGGACCTGGATCGGCACGCCAATCAACGGGCCGATATCCAGGCGGTGAACATCACCCCACAG
GGGTTCGATCTGCAATTCCGCACCTGGGGCGATACCCGCGTCGCGCGGGTGCGCGCCAGCTGGATGGCGATCGGCCCCTT
GCGGCACGAGGATGACTGGGACCCGGATTGA

Upstream 100 bases:

>100_bases
CATTAGGCGGGATCTGTCCAGAAGATAGAAAGCCCCGGTTTTTCCGGGGCTTTATTCATTCGCCGTCGTGGCATTTCGTG
ATGCGCGGGAGGAGCGTGAA

Downstream 100 bases:

>100_bases
TCCGCTCAGGCGCGGTCCAGGTTCAGCCCGATCAATTCGGCCACCTGCCGGGGGTGGGTGATCGGCAGCATGTGGCCCGC
ACCGGGAACGCGGGCGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MRRFEHFAVGVASGSTEMFSAFEDGGPMWTGQGPRVESQAILFDESFVEPPVVHVSLSMWDLDRHANQRADIQAVNITPQ
GFDLQFRTWGDTRVARVRASWMAIGPLRHEDDWDPD

Sequences:

>Translated_116_residues
MRRFEHFAVGVASGSTEMFSAFEDGGPMWTGQGPRVESQAILFDESFVEPPVVHVSLSMWDLDRHANQRADIQAVNITPQ
GFDLQFRTWGDTRVARVRASWMAIGPLRHEDDWDPD
>Mature_116_residues
MRRFEHFAVGVASGSTEMFSAFEDGGPMWTGQGPRVESQAILFDESFVEPPVVHVSLSMWDLDRHANQRADIQAVNITPQ
GFDLQFRTWGDTRVARVRASWMAIGPLRHEDDWDPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019019 [H]

Pfam domain/function: PF09458 H_lectin [H]

EC number: NA

Molecular weight: Translated: 13176; Mature: 13176

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFEHFAVGVASGSTEMFSAFEDGGPMWTGQGPRVESQAILFDESFVEPPVVHVSLSMW
CCCCCEEEEEECCCCCHHHHHHCCCCCEECCCCCCCCCEEEEEECCCCCCCEEEEEEEEE
DLDRHANQRADIQAVNITPQGFDLQFRTWGDTRVARVRASWMAIGPLRHEDDWDPD
ECCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEEECEEEECCCCCCCCCCCC
>Mature Secondary Structure
MRRFEHFAVGVASGSTEMFSAFEDGGPMWTGQGPRVESQAILFDESFVEPPVVHVSLSMW
CCCCCEEEEEECCCCCHHHHHHCCCCCEECCCCCCCCCEEEEEECCCCCCCEEEEEEEEE
DLDRHANQRADIQAVNITPQGFDLQFRTWGDTRVARVRASWMAIGPLRHEDDWDPD
ECCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEEECEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6209404 [H]