| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
Click here to switch to the map view.
The map label for this gene is 119386512
Identifier: 119386512
GI number: 119386512
Start: 942233
End: 942772
Strand: Direct
Name: 119386512
Synonym: Pden_3805
Alternate gene names: NA
Gene position: 942233-942772 (Clockwise)
Preceding gene: 119386511
Following gene: 119386514
Centisome position: 54.46
GC content: 68.89
Gene sequence:
>540_bases ATGACTTCTTCCTGCCCGCCGCTTGCGGATGCCGACTGGCCCGCAGAGATCCTCGACCTGCGCCAGGGTTTTGCCGGGGC GCTGAACGTCTATCGCACCATGGCCCATCACCCCGCGCTGTTGCGGGCCTGGGCGCCGCTGCGCCAGCATGTCGTCAAGG ATACCGCGCTTGGCCCGATCCGCTCGGAACTGGTGATCCTGCGGGCGGCCCATCGCATGGGCTCGGCTTATGAATGGGCG CATCACGTCAGCCGCGCGCGGGCGCTTGGCATGGCGGACGAGCGCATCCTTGCCATGCGCGGCGAGGGCATGCCGGGGGG CGAGGACGGGCTGATCGCGGCGGCGGTCGATGCGCTTTTCGACCAGCGCCGCCTGCCCGAGACGCTGGAGGCCGAACTGG CGCAGGCCCTTGGGCGCGAGGCGGTCATGGACCTGATCGCCACCGTCGGCTTCTATTCGGTCCTAGGCTATATCCTGATG ACCTACGGCACGCCGATCGACGATGCCGTGGCGGCCGAAATGGCCGCCCGGCCGCTTTAG
Upstream 100 bases:
>100_bases CGACCTGGCGCAGATCGCCCGCTATCGCGGCTTCACCGGCATCTGGGCCGATCGCGCGCCCGAGATCTATGCGAAATACT TTCCCTGACCGGAGCTTTTC
Downstream 100 bases:
>100_bases AACGGGATGTCGTCGTCGAAATCGGGGCGGCTCTGCGACTGGCCGCCACCGCCGCCCGAGGAATATCCGCCCCCGGACGA GCTGCCGCCGGAAGAGCCAC
Product: carboxymuconolactone decarboxylase
Products: NA
Alternate protein names: Alkylhydroperoxidase
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTSSCPPLADADWPAEILDLRQGFAGALNVYRTMAHHPALLRAWAPLRQHVVKDTALGPIRSELVILRAAHRMGSAYEWA HHVSRARALGMADERILAMRGEGMPGGEDGLIAAAVDALFDQRRLPETLEAELAQALGREAVMDLIATVGFYSVLGYILM TYGTPIDDAVAAEMAARPL
Sequences:
>Translated_179_residues MTSSCPPLADADWPAEILDLRQGFAGALNVYRTMAHHPALLRAWAPLRQHVVKDTALGPIRSELVILRAAHRMGSAYEWA HHVSRARALGMADERILAMRGEGMPGGEDGLIAAAVDALFDQRRLPETLEAELAQALGREAVMDLIATVGFYSVLGYILM TYGTPIDDAVAAEMAARPL >Mature_178_residues TSSCPPLADADWPAEILDLRQGFAGALNVYRTMAHHPALLRAWAPLRQHVVKDTALGPIRSELVILRAAHRMGSAYEWAH HVSRARALGMADERILAMRGEGMPGGEDGLIAAAVDALFDQRRLPETLEAELAQALGREAVMDLIATVGFYSVLGYILMT YGTPIDDAVAAEMAARPL
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19386; Mature: 19254
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSCPPLADADWPAEILDLRQGFAGALNVYRTMAHHPALLRAWAPLRQHVVKDTALGPI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RSELVILRAAHRMGSAYEWAHHVSRARALGMADERILAMRGEGMPGGEDGLIAAAVDALF HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH DQRRLPETLEAELAQALGREAVMDLIATVGFYSVLGYILMTYGTPIDDAVAAEMAARPL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TSSCPPLADADWPAEILDLRQGFAGALNVYRTMAHHPALLRAWAPLRQHVVKDTALGPI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RSELVILRAAHRMGSAYEWAHHVSRARALGMADERILAMRGEGMPGGEDGLIAAAVDALF HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH DQRRLPETLEAELAQALGREAVMDLIATVGFYSVLGYILMTYGTPIDDAVAAEMAARPL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA