Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
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Accession | NC_008687 |
Length | 1,730,097 |
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The map label for this gene is phoH [H]
Identifier: 119386400
GI number: 119386400
Start: 840967
End: 842094
Strand: Direct
Name: phoH [H]
Synonym: Pden_3692
Alternate gene names: 119386400
Gene position: 840967-842094 (Clockwise)
Preceding gene: 119386399
Following gene: 119386401
Centisome position: 48.61
GC content: 68.09
Gene sequence:
>1128_bases TTGGGTCTGACCCCTACGCATCCCGCGACCGCGACCCCCGGCGAAACCCTGCTGGAATTCCACGACAACCGGCTGTTGAT CGACCTCTGCGGCCCGCATGACCGCCACCTCGCGCGGATCGAGGAGGCGCTGAAGGTGCATATCCTGCGACGCGGCAACC TTCTGTCGGTCGTGGGCCCGGTCGAGGCCCAGGCCGAGGCGGCGCAGGTGCTGCGCGCGCTTTACGCAAGGCTGGAGCAG GGCCGCCCGGTCGAGATGGCCGAGGTCGAGGCCGCGTTGCGCATGGGCAGCGAGACGGTGGCCGAAGGGCCAAGCCCGGC CGAGCAGCTGGAGATGTTCCAGACCGGCCCGATCGAGCTGCGCACCCGCAAGAAGACCGTTGAGCCGCGCACCGATGCGC AAAAGGACTATGTCCGTGCGCTGTTCGCCAACGAAATGGCTTTCGGCATCGGCCCCGCCGGCACCGGCAAGACCTACCTT GCGGTGGCCGTGGGCGTGACCATGCTGATCGGCGGCCATGTGGATCGCATCATCCTGTCGCGCCCCGCCGTCGAGGCGGG CGAGCGGTTGGGCTTCCTGCCCGGCGACATGAAGGAAAAGGTCGATCCCTACATGCAGCCGCTCTATGACGCGCTGAACG ATTTCCTGCCCGCGAAGCAGGTGCAGAAGCTGATGGAGGAAAAGCGCATCGAGATCGCGCCCTTGGCCTTCATGCGCGGC CGCACGCTGTCGAACAGCTTCGTGGTGCTGGACGAGGCGCAGAACGCCACCACCATGCAGATGAAGATGTTCCTGACCCG GCTGGGCGAGGGCTCGCGCATGGTGGTCACCGGCGACCGCACCCAGATCGACCTGCCGCGCGGCGTGCATTCCGGCCTGG TCGAGGCGGAAAAGATCCTCAAGGGCATCAAGGGCATCAGCTTCAGCTATTTCACCGCCAAGGACGTGGTGCGCCATTCG CTGGTCGCCCGCATCATCGAAGCCTACGACGCCGAGGCCGAGGCGGCGCTGGCCCGGGGCGAGGTCTTCGACGAGCGCGG CCAGCGCATCCCGCGGCGCGAGCCGCGGCTGGCCGGCGGGGGAATGGCCGGCGGAGGAGTGGCAGGTGGGGGGCCGAGCG ATGCCTGA
Upstream 100 bases:
>100_bases CGAATCGGCTGCAAATCCAAAACAGCGGGGCCGCCCCTCTTGTGCGAATCCCGCGCAGTTGCAACCATGAGTTACTGAGA ACCCCACCTCGGAGACGAAT
Downstream 100 bases:
>100_bases CAGTGCCGACGCGCCGGAAGAGGTGCCGGAGTTCGTCGACATCGTGCTGGAGGACGACCGCTGGGAGGATGCCGACCTGC CCGCCATGGCCGAACGCGCC
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MGLTPTHPATATPGETLLEFHDNRLLIDLCGPHDRHLARIEEALKVHILRRGNLLSVVGPVEAQAEAAQVLRALYARLEQ GRPVEMAEVEAALRMGSETVAEGPSPAEQLEMFQTGPIELRTRKKTVEPRTDAQKDYVRALFANEMAFGIGPAGTGKTYL AVAVGVTMLIGGHVDRIILSRPAVEAGERLGFLPGDMKEKVDPYMQPLYDALNDFLPAKQVQKLMEEKRIEIAPLAFMRG RTLSNSFVVLDEAQNATTMQMKMFLTRLGEGSRMVVTGDRTQIDLPRGVHSGLVEAEKILKGIKGISFSYFTAKDVVRHS LVARIIEAYDAEAEAALARGEVFDERGQRIPRREPRLAGGGMAGGGVAGGGPSDA
Sequences:
>Translated_375_residues MGLTPTHPATATPGETLLEFHDNRLLIDLCGPHDRHLARIEEALKVHILRRGNLLSVVGPVEAQAEAAQVLRALYARLEQ GRPVEMAEVEAALRMGSETVAEGPSPAEQLEMFQTGPIELRTRKKTVEPRTDAQKDYVRALFANEMAFGIGPAGTGKTYL AVAVGVTMLIGGHVDRIILSRPAVEAGERLGFLPGDMKEKVDPYMQPLYDALNDFLPAKQVQKLMEEKRIEIAPLAFMRG RTLSNSFVVLDEAQNATTMQMKMFLTRLGEGSRMVVTGDRTQIDLPRGVHSGLVEAEKILKGIKGISFSYFTAKDVVRHS LVARIIEAYDAEAEAALARGEVFDERGQRIPRREPRLAGGGMAGGGVAGGGPSDA >Mature_374_residues GLTPTHPATATPGETLLEFHDNRLLIDLCGPHDRHLARIEEALKVHILRRGNLLSVVGPVEAQAEAAQVLRALYARLEQG RPVEMAEVEAALRMGSETVAEGPSPAEQLEMFQTGPIELRTRKKTVEPRTDAQKDYVRALFANEMAFGIGPAGTGKTYLA VAVGVTMLIGGHVDRIILSRPAVEAGERLGFLPGDMKEKVDPYMQPLYDALNDFLPAKQVQKLMEEKRIEIAPLAFMRGR TLSNSFVVLDEAQNATTMQMKMFLTRLGEGSRMVVTGDRTQIDLPRGVHSGLVEAEKILKGIKGISFSYFTAKDVVRHSL VARIIEAYDAEAEAALARGEVFDERGQRIPRREPRLAGGGMAGGGVAGGGPSDA
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=329, Percent_Identity=46.2006079027356, Blast_Score=276, Evalue=2e-75, Organism=Escherichia coli, GI1787257, Length=202, Percent_Identity=47.5247524752475, Blast_Score=188, Evalue=5e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 40758; Mature: 40626
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTPTHPATATPGETLLEFHDNRLLIDLCGPHDRHLARIEEALKVHILRRGNLLSVVGP CCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECC VEAQAEAAQVLRALYARLEQGRPVEMAEVEAALRMGSETVAEGPSPAEQLEMFQTGPIEL CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHCCCCEEE RTRKKTVEPRTDAQKDYVRALFANEMAFGIGPAGTGKTYLAVAVGVTMLIGGHVDRIILS EECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHC RPAVEAGERLGFLPGDMKEKVDPYMQPLYDALNDFLPAKQVQKLMEEKRIEIAPLAFMRG CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHCC RTLSNSFVVLDEAQNATTMQMKMFLTRLGEGSRMVVTGDRTQIDLPRGVHSGLVEAEKIL CCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHH KGIKGISFSYFTAKDVVRHSLVARIIEAYDAEAEAALARGEVFDERGQRIPRREPRLAGG HHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GMAGGGVAGGGPSDA CCCCCCCCCCCCCCC >Mature Secondary Structure GLTPTHPATATPGETLLEFHDNRLLIDLCGPHDRHLARIEEALKVHILRRGNLLSVVGP CCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECC VEAQAEAAQVLRALYARLEQGRPVEMAEVEAALRMGSETVAEGPSPAEQLEMFQTGPIEL CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHCCCCEEE RTRKKTVEPRTDAQKDYVRALFANEMAFGIGPAGTGKTYLAVAVGVTMLIGGHVDRIILS EECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHC RPAVEAGERLGFLPGDMKEKVDPYMQPLYDALNDFLPAKQVQKLMEEKRIEIAPLAFMRG CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHCC RTLSNSFVVLDEAQNATTMQMKMFLTRLGEGSRMVVTGDRTQIDLPRGVHSGLVEAEKIL CCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHH KGIKGISFSYFTAKDVVRHSLVARIIEAYDAEAEAALARGEVFDERGQRIPRREPRLAGG HHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GMAGGGVAGGGPSDA CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]