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The map label for this gene is ydhP [H]

Identifier: 119386351

GI number: 119386351

Start: 793859

End: 795055

Strand: Direct

Name: ydhP [H]

Synonym: Pden_3643

Alternate gene names: 119386351

Gene position: 793859-795055 (Clockwise)

Preceding gene: 119386350

Following gene: 119386353

Centisome position: 45.89

GC content: 70.68

Gene sequence:

>1197_bases
ATGTCGCCGCAGCCCAATCTCAAGCTTGCCATCCTTGCCCTTGGCCTTGGCGCCTTTGCCATCGGCACTTCGGAATTCGC
CGCCATGGGGCTGCTGCCCTGGTATGCCAGCGACCTCGGCATCACCGAGCCGCAGGCGGGCCATGTGGTTTCCGCCTATG
CGCTTGGCGTGGTCGTGGGGGCGCCCGTCACCTCGATCCTGGGCGCGCGGCTGCCGCGGCGGCGCTATCTTGCGGCGCTG
ATCGCGGTTTATGGCGCGATGAACCTGCTGGCGGCGGTGCTGCCGGGTTACGGCACGCTGGTCGGCATGCGCTTTCTGGC
CGGCTTGCCGCATGGCGGCTTTCTGGGCGTGGCCATGCTGTTTGCCGCCGATGCCCTGCCGCGCGAACAGCGTGCCAAGG
GCGTGACGCAGGTGCTGCTGGGGCTGACCATCGCCAATATCGCCGGGGTGCCCTTGGCCGGTATCCTGGGGCAGGGCTTC
GGCTGGCGCTGGGGTTTCGCGCTGCCCGGCGTGCTGGCGCTGTTGGCGGGCTGGCTGATCCTGCGGCTGGCGCCCCGGGT
CGGCGCGCCCAAGGACGCGCGGCCGCTGGCCGAACTGAGGGCGCTGCGCAATCCGGCGGTCATGCTGATCCTGCTGGTCG
GCGCCATCGGCTTCGGCGGGCTTTTCGCGGTCTATTCCTATCTTTCCGCCGCGATGCTGGCGACGGCCCAGCCGCCGGGC
TGGGCCATACCGGCTGCGCTTTCGGCCTTTGGCATCGGCGGCACGCTAGGCAGCATTCTGGCCGCCCGCCTGACCATCCG
GCACGGCACCTGGGGCGCGGCCTTGCGGCTGATGCTGTTCATGGCCGTGACCCAGGGCTTTGCGGCCTGGGCGGTGGGCA
ATTGGGGGCTGATGCTGGTCTCGTCCTTCCTGCTGGGTCTGGGCTCGGGCATGGTGGTGCCCTTGCAGACCCGGCTGATG
GATGTCGCGGGCGAGGCGCAAAGCATGGCCGCGGCGATGAACCATGCGGCCTTCAACGCCGCCAATGCGCTGGGGCCGTG
GCTGGCCGGGCTGGCGCTGGCGGCGGGCTGGGGCTGGCGTTCCTCGGGCCTGGTGGCGGTGGCGCTGTCAGGGGCCGGTC
TGCTCGCCCTCGGCCTTGCCTGGCGGCAGGCCCGTCTCTCCGGGTACCAACTGCATGATCGCCCGGCGCGAGTGTGA

Upstream 100 bases:

>100_bases
GCATGTCAGGGCTTCGCGGCGGGCGGCTTGGCGACATATGGTCGCATCTGTTAACGCTAGCGGGCCTGTTTCCCCCATCC
GCCAGCCCGAAGGTGCCGCC

Downstream 100 bases:

>100_bases
CGCGAATTCCCGCCGCCACGAGATGAGCAGCACATAGCTGGTGGCAAGGAACAGCCCCAGCGGTCCTGCCAGCCAGCCAA
GTGCCCCCAGCGCGAAATAG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MSPQPNLKLAILALGLGAFAIGTSEFAAMGLLPWYASDLGITEPQAGHVVSAYALGVVVGAPVTSILGARLPRRRYLAAL
IAVYGAMNLLAAVLPGYGTLVGMRFLAGLPHGGFLGVAMLFAADALPREQRAKGVTQVLLGLTIANIAGVPLAGILGQGF
GWRWGFALPGVLALLAGWLILRLAPRVGAPKDARPLAELRALRNPAVMLILLVGAIGFGGLFAVYSYLSAAMLATAQPPG
WAIPAALSAFGIGGTLGSILAARLTIRHGTWGAALRLMLFMAVTQGFAAWAVGNWGLMLVSSFLLGLGSGMVVPLQTRLM
DVAGEAQSMAAAMNHAAFNAANALGPWLAGLALAAGWGWRSSGLVAVALSGAGLLALGLAWRQARLSGYQLHDRPARV

Sequences:

>Translated_398_residues
MSPQPNLKLAILALGLGAFAIGTSEFAAMGLLPWYASDLGITEPQAGHVVSAYALGVVVGAPVTSILGARLPRRRYLAAL
IAVYGAMNLLAAVLPGYGTLVGMRFLAGLPHGGFLGVAMLFAADALPREQRAKGVTQVLLGLTIANIAGVPLAGILGQGF
GWRWGFALPGVLALLAGWLILRLAPRVGAPKDARPLAELRALRNPAVMLILLVGAIGFGGLFAVYSYLSAAMLATAQPPG
WAIPAALSAFGIGGTLGSILAARLTIRHGTWGAALRLMLFMAVTQGFAAWAVGNWGLMLVSSFLLGLGSGMVVPLQTRLM
DVAGEAQSMAAAMNHAAFNAANALGPWLAGLALAAGWGWRSSGLVAVALSGAGLLALGLAWRQARLSGYQLHDRPARV
>Mature_397_residues
SPQPNLKLAILALGLGAFAIGTSEFAAMGLLPWYASDLGITEPQAGHVVSAYALGVVVGAPVTSILGARLPRRRYLAALI
AVYGAMNLLAAVLPGYGTLVGMRFLAGLPHGGFLGVAMLFAADALPREQRAKGVTQVLLGLTIANIAGVPLAGILGQGFG
WRWGFALPGVLALLAGWLILRLAPRVGAPKDARPLAELRALRNPAVMLILLVGAIGFGGLFAVYSYLSAAMLATAQPPGW
AIPAALSAFGIGGTLGSILAARLTIRHGTWGAALRLMLFMAVTQGFAAWAVGNWGLMLVSSFLLGLGSGMVVPLQTRLMD
VAGEAQSMAAAMNHAAFNAANALGPWLAGLALAAGWGWRSSGLVAVALSGAGLLALGLAWRQARLSGYQLHDRPARV

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=390, Percent_Identity=34.8717948717949, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1786595, Length=391, Percent_Identity=29.923273657289, Blast_Score=145, Evalue=6e-36,
Organism=Escherichia coli, GI1787808, Length=221, Percent_Identity=26.6968325791855, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI145693198, Length=245, Percent_Identity=26.530612244898, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40889; Mature: 40758

Theoretical pI: Translated: 11.77; Mature: 11.77

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPQPNLKLAILALGLGAFAIGTSEFAAMGLLPWYASDLGITEPQAGHVVSAYALGVVVG
CCCCCCCEEEHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
APVTSILGARLPRRRYLAALIAVYGAMNLLAAVLPGYGTLVGMRFLAGLPHGGFLGVAML
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHH
FAADALPREQRAKGVTQVLLGLTIANIAGVPLAGILGQGFGWRWGFALPGVLALLAGWLI
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LRLAPRVGAPKDARPLAELRALRNPAVMLILLVGAIGFGGLFAVYSYLSAAMLATAQPPG
HHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCC
WAIPAALSAFGIGGTLGSILAARLTIRHGTWGAALRLMLFMAVTQGFAAWAVGNWGLMLV
CCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHCCHHHHHH
SSFLLGLGSGMVVPLQTRLMDVAGEAQSMAAAMNHAAFNAANALGPWLAGLALAAGWGWR
HHHHHHCCCCCEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SSGLVAVALSGAGLLALGLAWRQARLSGYQLHDRPARV
CCCEEEEEECCCHHHHHHHHHHHHHHCCCEECCCCCCC
>Mature Secondary Structure 
SPQPNLKLAILALGLGAFAIGTSEFAAMGLLPWYASDLGITEPQAGHVVSAYALGVVVG
CCCCCCEEEHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
APVTSILGARLPRRRYLAALIAVYGAMNLLAAVLPGYGTLVGMRFLAGLPHGGFLGVAML
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHH
FAADALPREQRAKGVTQVLLGLTIANIAGVPLAGILGQGFGWRWGFALPGVLALLAGWLI
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LRLAPRVGAPKDARPLAELRALRNPAVMLILLVGAIGFGGLFAVYSYLSAAMLATAQPPG
HHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCC
WAIPAALSAFGIGGTLGSILAARLTIRHGTWGAALRLMLFMAVTQGFAAWAVGNWGLMLV
CCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHCCHHHHHH
SSFLLGLGSGMVVPLQTRLMDVAGEAQSMAAAMNHAAFNAANALGPWLAGLALAAGWGWR
HHHHHHCCCCCEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SSGLVAVALSGAGLLALGLAWRQARLSGYQLHDRPARV
CCCEEEEEECCCHHHHHHHHHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]