Click here to switch to the map view.

The map label for this gene is xyoA [H]

Identifier: 119386293

GI number: 119386293

Start: 735702

End: 736973

Strand: Direct

Name: xyoA [H]

Synonym: Pden_3584

Alternate gene names: 119386293

Gene position: 735702-736973 (Clockwise)

Preceding gene: 119386292

Following gene: 119386294

Centisome position: 42.52

GC content: 64.07

Gene sequence:

>1272_bases
ATGAACACCTCATCGCACGGCATGACCGTCAACGATTTCGGCCTTGAACATGCGCATTGGCGCAACTGGGTCGGCAACCA
GTCCTGCGTCCGCGCGGCGCGCGCCGCGCCCGCCAGCGAGGACGAGCTTTGCGCCCTGATAGCCGGGGCGACCGGCAAGG
GCATGAACGTGCGCGTCGCCGGTTCGGGGCATTCCTTCACCCCGGTCGCCCTGACCAGCGGGCTGCACCTGACGCTGGCC
AAGATGAAGGGTGTCAAGCATATCGACCATGAAAGGCGCCGCGTCACCGCCTCGGCCGGGACCACGATCAACGAACTGGT
CAAGGTGCTGAAGGCCGAGGGGCTTTCGATGATCAACCAGGGCGATATCGACAGCCAGGCCATCGCGGGGGCGCTGACCA
CCGGCACGCATGGCACGGGGGCTGCGCTGCCGGTGCTGGCCGATGCCATTGTCGGGATGAAGTTGATCCAGCCCGACGGC
TCGATCATCACCGTGGACGAGTCGACGCCGGACCTGCTGCTGGCCGGGCGGGTGTCGCTGGGCCTGCTGGGCGCGATCTC
GGAAATGACGCTGCAACTGACCGACAGCTATCGCCTGCGCGAAAGGATCTGGCGCGAGGATTTCGAATCCGCGATGGAAA
TGCACGATGAACTGGCCGCCAGGCACCGCCATTTCAGCTTCTTCTGGTGCCCCTACGAGCAAAGCCGGCATTGCTATTGC
CTGCCCGACACCTCGGCCACCTCGAAATCGGGCCGCACCACGGATGTCTGCGAGATGAAGGTGATGGACATCACCGACGA
GGAACCCTTCGAGGCCGAGTTCGAAAAGGTCGCCTACAGCTCGGATGTCTATCCCATCGAATATGTCGCGAACTTCCATG
AGCTGGAATATGCGGTCCCGCGCGAGCATGGCAAGGATGCGGTCCGCGCCGTCCGCAGGCTGATGCTGGAGGAATTCCCC
GACGCGATCTATCCCATCGAATACCGCTTTACCGCGGGGGACGAGGCCTGGATGAGCCCGTTCCATCGCCAGGACAGCGT
GACCGTCTCGGTCTCGGGCGAGCCGGGCAAGGATTACTGGGACTACCTGCGCGCCGTGGATCAGATCCTGCGCGGCTACG
GCGCCCGGCCGCATTGGGGCAAGATGCATTTCCTGACCGGGCAGGACGTGACCGACATCTATCCCCGCGCCGACGATTTC
CGCGCGCTGCGCCGCAAGCTGGACCCGCAGGGTTTTTACCTGAACGACCACCTTTCGCAGCTTTTCCGCTGA

Upstream 100 bases:

>100_bases
TCTTGCCAGCGACGACGCCAGCTTCGTCAACGGCGCACATCTGTTCGCGGACAACGGCTACACCGCAATCTGAAAACAGG
GACCGACAGGGATTAACGAC

Downstream 100 bases:

>100_bases
CCGCCAACCGCAGCCGGAACCGGGGCGCAGAACCCTGGGCCGGCCTTCAACAGGGAGCAGCCGCATGGCTCATATCGGCA
CATTCGTCATCTACATCATC

Product: FAD-linked oxidoreductase

Products: NA

Alternate protein names: Alditol oxidase [H]

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MNTSSHGMTVNDFGLEHAHWRNWVGNQSCVRAARAAPASEDELCALIAGATGKGMNVRVAGSGHSFTPVALTSGLHLTLA
KMKGVKHIDHERRRVTASAGTTINELVKVLKAEGLSMINQGDIDSQAIAGALTTGTHGTGAALPVLADAIVGMKLIQPDG
SIITVDESTPDLLLAGRVSLGLLGAISEMTLQLTDSYRLRERIWREDFESAMEMHDELAARHRHFSFFWCPYEQSRHCYC
LPDTSATSKSGRTTDVCEMKVMDITDEEPFEAEFEKVAYSSDVYPIEYVANFHELEYAVPREHGKDAVRAVRRLMLEEFP
DAIYPIEYRFTAGDEAWMSPFHRQDSVTVSVSGEPGKDYWDYLRAVDQILRGYGARPHWGKMHFLTGQDVTDIYPRADDF
RALRRKLDPQGFYLNDHLSQLFR

Sequences:

>Translated_423_residues
MNTSSHGMTVNDFGLEHAHWRNWVGNQSCVRAARAAPASEDELCALIAGATGKGMNVRVAGSGHSFTPVALTSGLHLTLA
KMKGVKHIDHERRRVTASAGTTINELVKVLKAEGLSMINQGDIDSQAIAGALTTGTHGTGAALPVLADAIVGMKLIQPDG
SIITVDESTPDLLLAGRVSLGLLGAISEMTLQLTDSYRLRERIWREDFESAMEMHDELAARHRHFSFFWCPYEQSRHCYC
LPDTSATSKSGRTTDVCEMKVMDITDEEPFEAEFEKVAYSSDVYPIEYVANFHELEYAVPREHGKDAVRAVRRLMLEEFP
DAIYPIEYRFTAGDEAWMSPFHRQDSVTVSVSGEPGKDYWDYLRAVDQILRGYGARPHWGKMHFLTGQDVTDIYPRADDF
RALRRKLDPQGFYLNDHLSQLFR
>Mature_423_residues
MNTSSHGMTVNDFGLEHAHWRNWVGNQSCVRAARAAPASEDELCALIAGATGKGMNVRVAGSGHSFTPVALTSGLHLTLA
KMKGVKHIDHERRRVTASAGTTINELVKVLKAEGLSMINQGDIDSQAIAGALTTGTHGTGAALPVLADAIVGMKLIQPDG
SIITVDESTPDLLLAGRVSLGLLGAISEMTLQLTDSYRLRERIWREDFESAMEMHDELAARHRHFSFFWCPYEQSRHCYC
LPDTSATSKSGRTTDVCEMKVMDITDEEPFEAEFEKVAYSSDVYPIEYVANFHELEYAVPREHGKDAVRAVRRLMLEEFP
DAIYPIEYRFTAGDEAWMSPFHRQDSVTVSVSGEPGKDYWDYLRAVDQILRGYGARPHWGKMHFLTGQDVTDIYPRADDF
RALRRKLDPQGFYLNDHLSQLFR

Specific function: Catalyzes the oxidation of xylitol to xylose, also acts on D-sorbitol [H]

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323553, Length=223, Percent_Identity=26.0089686098655, Blast_Score=91, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007173
- InterPro:   IPR016166
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF04030 ALO; PF01565 FAD_binding_4 [H]

EC number: =1.1.3.41 [H]

Molecular weight: Translated: 47244; Mature: 47244

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSSHGMTVNDFGLEHAHWRNWVGNQSCVRAARAAPASEDELCALIAGATGKGMNVRVA
CCCCCCCCEEHHCCCCHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEE
GSGHSFTPVALTSGLHLTLAKMKGVKHIDHERRRVTASAGTTINELVKVLKAEGLSMINQ
CCCCCCCHHHECCCCEEEHHHHCCCHHHCHHHHEEECCCCCCHHHHHHHHHHCCCCCCCC
GDIDSQAIAGALTTGTHGTGAALPVLADAIVGMKLIQPDGSIITVDESTPDLLLAGRVSL
CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCEEEECCCCCEEEECCCCCCEEEECHHHH
GLLGAISEMTLQLTDSYRLRERIWREDFESAMEMHDELAARHRHFSFFWCPYEQSRHCYC
HHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEE
LPDTSATSKSGRTTDVCEMKVMDITDEEPFEAEFEKVAYSSDVYPIEYVANFHELEYAVP
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
REHGKDAVRAVRRLMLEEFPDAIYPIEYRFTAGDEAWMSPFHRQDSVTVSVSGEPGKDYW
HHCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCCCCCCEEEEECCCCCHHHH
DYLRAVDQILRGYGARPHWGKMHFLTGQDVTDIYPRADDFRALRRKLDPQGFYLNDHLSQ
HHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHCCCCHHHHHHHHHCCCCCEEEHHHHHH
LFR
HCC
>Mature Secondary Structure
MNTSSHGMTVNDFGLEHAHWRNWVGNQSCVRAARAAPASEDELCALIAGATGKGMNVRVA
CCCCCCCCEEHHCCCCHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEE
GSGHSFTPVALTSGLHLTLAKMKGVKHIDHERRRVTASAGTTINELVKVLKAEGLSMINQ
CCCCCCCHHHECCCCEEEHHHHCCCHHHCHHHHEEECCCCCCHHHHHHHHHHCCCCCCCC
GDIDSQAIAGALTTGTHGTGAALPVLADAIVGMKLIQPDGSIITVDESTPDLLLAGRVSL
CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCEEEECCCCCEEEECCCCCCEEEECHHHH
GLLGAISEMTLQLTDSYRLRERIWREDFESAMEMHDELAARHRHFSFFWCPYEQSRHCYC
HHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEE
LPDTSATSKSGRTTDVCEMKVMDITDEEPFEAEFEKVAYSSDVYPIEYVANFHELEYAVP
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
REHGKDAVRAVRRLMLEEFPDAIYPIEYRFTAGDEAWMSPFHRQDSVTVSVSGEPGKDYW
HHCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCCCCCCEEEEECCCCCHHHH
DYLRAVDQILRGYGARPHWGKMHFLTGQDVTDIYPRADDFRALRRKLDPQGFYLNDHLSQ
HHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHCCCCHHHHHHHHHCCCCCEEEHHHHHH
LFR
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]