Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
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Accession | NC_008687 |
Length | 1,730,097 |
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The map label for this gene is 119386255
Identifier: 119386255
GI number: 119386255
Start: 693244
End: 693693
Strand: Direct
Name: 119386255
Synonym: Pden_3544
Alternate gene names: NA
Gene position: 693244-693693 (Clockwise)
Preceding gene: 119386254
Following gene: 119386256
Centisome position: 40.07
GC content: 68.22
Gene sequence:
>450_bases ATGACGTCCGAGCTGATGATCGACCCGGAAGCCGAGCGCGAGATCCGCTTTCTGCTCGGCCGGTATGTGCATCTGCTGGA CGCGGGCGAGGCGACGGCATGGGCCGGGCTTTTCACCCCGGACGGCCGCTGGATTCGCCGCAATGCCGCGCCCGCCGCGC TTGGCGGCTCGGGCATTGCCGCCGGCGAAAGGCGGGGTCGGGCCGAACTGGCGGAACTGGCCGAATATTCGGTGCGGAAT TTTCGCGGGCTGTGCCGGCACCAGATGACCGACATCTTGCTGTGGCGGGCCGGCAGGGGCGGCGTCCAGGGGAAATGCCG CATGATCATCACCGATTTCCGCGACGGTCCCGGCCGCGTGGCGATGGTCGGCAGCTATGACATGACCTTTGCCCGCACGC CCGAAGGCTGGCGCATCGCCATGCTTTCGGCCGAGTTCCTGCCGCGCTGA
Upstream 100 bases:
>100_bases ACGACATCAATTCGGTGATGTCCGGCGCCTATCCCGGGCCGGGCATCACGCTGGGTCCGGCGCTGACCTTCGGATATGTC ATCGGGCAATCGGCGGCCGC
Downstream 100 bases:
>100_bases TGCCTCAAGGCGGCCAGGCCCGATGCCGGCAGGCAAGCCGAGGATGTCGCCTTGGCAGCGCCGCGAAGATCCGTGCCGGC GTGACGTTGTTGTTGCAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTSELMIDPEAEREIRFLLGRYVHLLDAGEATAWAGLFTPDGRWIRRNAAPAALGGSGIAAGERRGRAELAELAEYSVRN FRGLCRHQMTDILLWRAGRGGVQGKCRMIITDFRDGPGRVAMVGSYDMTFARTPEGWRIAMLSAEFLPR
Sequences:
>Translated_149_residues MTSELMIDPEAEREIRFLLGRYVHLLDAGEATAWAGLFTPDGRWIRRNAAPAALGGSGIAAGERRGRAELAELAEYSVRN FRGLCRHQMTDILLWRAGRGGVQGKCRMIITDFRDGPGRVAMVGSYDMTFARTPEGWRIAMLSAEFLPR >Mature_148_residues TSELMIDPEAEREIRFLLGRYVHLLDAGEATAWAGLFTPDGRWIRRNAAPAALGGSGIAAGERRGRAELAELAEYSVRNF RGLCRHQMTDILLWRAGRGGVQGKCRMIITDFRDGPGRVAMVGSYDMTFARTPEGWRIAMLSAEFLPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16585; Mature: 16454
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSELMIDPEAEREIRFLLGRYVHLLDAGEATAWAGLFTPDGRWIRRNAAPAALGGSGIA CCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCC AGERRGRAELAELAEYSVRNFRGLCRHQMTDILLWRAGRGGVQGKCRMIITDFRDGPGRV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEEECCCCCCCE AMVGSYDMTFARTPEGWRIAMLSAEFLPR EEEECCCEEEEECCCCEEEEEEECCCCCC >Mature Secondary Structure TSELMIDPEAEREIRFLLGRYVHLLDAGEATAWAGLFTPDGRWIRRNAAPAALGGSGIA CCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCC AGERRGRAELAELAEYSVRNFRGLCRHQMTDILLWRAGRGGVQGKCRMIITDFRDGPGRV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEEECCCCCCCE AMVGSYDMTFARTPEGWRIAMLSAEFLPR EEEECCCEEEEECCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA