Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

Click here to switch to the map view.

The map label for this gene is 119386255

Identifier: 119386255

GI number: 119386255

Start: 693244

End: 693693

Strand: Direct

Name: 119386255

Synonym: Pden_3544

Alternate gene names: NA

Gene position: 693244-693693 (Clockwise)

Preceding gene: 119386254

Following gene: 119386256

Centisome position: 40.07

GC content: 68.22

Gene sequence:

>450_bases
ATGACGTCCGAGCTGATGATCGACCCGGAAGCCGAGCGCGAGATCCGCTTTCTGCTCGGCCGGTATGTGCATCTGCTGGA
CGCGGGCGAGGCGACGGCATGGGCCGGGCTTTTCACCCCGGACGGCCGCTGGATTCGCCGCAATGCCGCGCCCGCCGCGC
TTGGCGGCTCGGGCATTGCCGCCGGCGAAAGGCGGGGTCGGGCCGAACTGGCGGAACTGGCCGAATATTCGGTGCGGAAT
TTTCGCGGGCTGTGCCGGCACCAGATGACCGACATCTTGCTGTGGCGGGCCGGCAGGGGCGGCGTCCAGGGGAAATGCCG
CATGATCATCACCGATTTCCGCGACGGTCCCGGCCGCGTGGCGATGGTCGGCAGCTATGACATGACCTTTGCCCGCACGC
CCGAAGGCTGGCGCATCGCCATGCTTTCGGCCGAGTTCCTGCCGCGCTGA

Upstream 100 bases:

>100_bases
ACGACATCAATTCGGTGATGTCCGGCGCCTATCCCGGGCCGGGCATCACGCTGGGTCCGGCGCTGACCTTCGGATATGTC
ATCGGGCAATCGGCGGCCGC

Downstream 100 bases:

>100_bases
TGCCTCAAGGCGGCCAGGCCCGATGCCGGCAGGCAAGCCGAGGATGTCGCCTTGGCAGCGCCGCGAAGATCCGTGCCGGC
GTGACGTTGTTGTTGCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MTSELMIDPEAEREIRFLLGRYVHLLDAGEATAWAGLFTPDGRWIRRNAAPAALGGSGIAAGERRGRAELAELAEYSVRN
FRGLCRHQMTDILLWRAGRGGVQGKCRMIITDFRDGPGRVAMVGSYDMTFARTPEGWRIAMLSAEFLPR

Sequences:

>Translated_149_residues
MTSELMIDPEAEREIRFLLGRYVHLLDAGEATAWAGLFTPDGRWIRRNAAPAALGGSGIAAGERRGRAELAELAEYSVRN
FRGLCRHQMTDILLWRAGRGGVQGKCRMIITDFRDGPGRVAMVGSYDMTFARTPEGWRIAMLSAEFLPR
>Mature_148_residues
TSELMIDPEAEREIRFLLGRYVHLLDAGEATAWAGLFTPDGRWIRRNAAPAALGGSGIAAGERRGRAELAELAEYSVRNF
RGLCRHQMTDILLWRAGRGGVQGKCRMIITDFRDGPGRVAMVGSYDMTFARTPEGWRIAMLSAEFLPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16585; Mature: 16454

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSELMIDPEAEREIRFLLGRYVHLLDAGEATAWAGLFTPDGRWIRRNAAPAALGGSGIA
CCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCC
AGERRGRAELAELAEYSVRNFRGLCRHQMTDILLWRAGRGGVQGKCRMIITDFRDGPGRV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEEECCCCCCCE
AMVGSYDMTFARTPEGWRIAMLSAEFLPR
EEEECCCEEEEECCCCEEEEEEECCCCCC
>Mature Secondary Structure 
TSELMIDPEAEREIRFLLGRYVHLLDAGEATAWAGLFTPDGRWIRRNAAPAALGGSGIA
CCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCC
AGERRGRAELAELAEYSVRNFRGLCRHQMTDILLWRAGRGGVQGKCRMIITDFRDGPGRV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEEECCCCCCCE
AMVGSYDMTFARTPEGWRIAMLSAEFLPR
EEEECCCEEEEECCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA