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The map label for this gene is yiaN [C]

Identifier: 119386250

GI number: 119386250

Start: 687446

End: 688756

Strand: Direct

Name: yiaN [C]

Synonym: Pden_3539

Alternate gene names: 119386250

Gene position: 687446-688756 (Clockwise)

Preceding gene: 119386249

Following gene: 119386251

Centisome position: 39.73

GC content: 64.15

Gene sequence:

>1311_bases
ATGGAACGTCTTGAAATCGGCTTAGCCGGCGTTGCGGCCATCCTGCTTCTGATCGGCATCCGCGTGCCCATCGGGGTGGC
CATGGGCTCGACTGCTTTCTTCGGCATCTGGGCCATGATGGGATTGAAGCCCGCCATCGGCATCACCAAGGCCATCCCGT
TCAACCTGATCGGCGACTGGAACCTCTCGGCGATCCCCATGTTCCTGTTCATGGGCTTTGTCGCGGTCGAGGCCAGGCTG
ACCCGCGGCCTGTTCGGTGCGGCCCGCATCTTCCTGGCGCGCATCCCCGGCGGGCTTGCCTCATCGACCGTCTTCGCATC
GGCCCTGTTCGGCGCGGCGAGCGGGTCGAGCGTTGCGACCTCGGCCGCCTTTTCGCGCATCGCCGTGCCCGAGATGCTGG
ACAGCAAATACAATCCCGGCCTTGCGACGGGTGCCGTCGCGGCCTCGGGCACGCTGGCCGCGCTGATCCCGCCCTCGGTG
CTGATGATCGTCTATTGCCTGCTGGTCGACACCTCGATCAACACGCTGTTCATGGCCGGCGTGATCCCCGGCATCCTGAC
GGCGACGGCCTTCATCCTGATGATCACCACGCGCTGCATGCTGAATCCGGGGCTTGCCCCCCGCTATGTCGACCACACGA
CGCGCGCCGAAAAGATCGCCCTGCTGCGCGATGCGTGGCCGCTGCCCCTGGTGACGTTCATCGTGATGGGCGGCATCTTT
ACCGGCGCCTTCACGGCCACGGAATCCGGCGCCGTCGGTGCCTTCCTGGCCTGCCTGATCGCCCTCGCGCGCGGCAGGAT
GAACCTTGCCATGCTGAAGCGGTCGATCATCGACACCGCAGCCGGCACCTCGGCCATCTTCATGATCGTGCTGGGCGCGG
CGCTTTTCGCGCGCTTCATCGCGCTCGCGACCATTCCGACCTGGGTGATGGGCTTCTTCGACGGCTACAGCGCCATGACC
GTGGTGATCCTGATCTGCATCATCCTGGTGCTGATGGGAACCTTCATGGAGGAAATCTCGATCATGCTGCTGACCATGCC
GGTGCTGGCGCCCCTGCTGGCGCAGCATGGCATCGACCTGATCTGGTTCGGCATCCTGGTCATCAAGCTGATGACCATCG
GCCTGATCAGCCCGCCGGTCGGCATGAATGTCTTCGTGATCAAGACGTCGCTCGGCAACAGAGTCACGCTGAACCAGATC
TTCGGCGGCGTGACCTGGTTCATCATGGTCGACCTGCTGGTCCTGGCTGCCCTGATCGCCTTTCCGCAGATCAGCCTCTG
GCTGCCGGGAATGATGACCACCACCCGCTGA

Upstream 100 bases:

>100_bases
CTTTTTCCTGGCGGTCGTGGTCATCCTGTTGCGGCTGGTCCTGGGGGACCGGGGTCGCATCCGCACCGCTGCCCATGCTC
TGGACATCTGAGGACGCGTC

Downstream 100 bases:

>100_bases
TTATCCTTCGCCGTGCCGCGGTGGAAATGCGGCACGGCCATGTCCAACCCTGGGGAGAGAGAACCATGAAAAGACTGCTT
CTGGGCATCGGCCTGCTGCC

Product: TRAP dicarboxylate transporter, DctM subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MERLEIGLAGVAAILLLIGIRVPIGVAMGSTAFFGIWAMMGLKPAIGITKAIPFNLIGDWNLSAIPMFLFMGFVAVEARL
TRGLFGAARIFLARIPGGLASSTVFASALFGAASGSSVATSAAFSRIAVPEMLDSKYNPGLATGAVAASGTLAALIPPSV
LMIVYCLLVDTSINTLFMAGVIPGILTATAFILMITTRCMLNPGLAPRYVDHTTRAEKIALLRDAWPLPLVTFIVMGGIF
TGAFTATESGAVGAFLACLIALARGRMNLAMLKRSIIDTAAGTSAIFMIVLGAALFARFIALATIPTWVMGFFDGYSAMT
VVILICIILVLMGTFMEEISIMLLTMPVLAPLLAQHGIDLIWFGILVIKLMTIGLISPPVGMNVFVIKTSLGNRVTLNQI
FGGVTWFIMVDLLVLAALIAFPQISLWLPGMMTTTR

Sequences:

>Translated_436_residues
MERLEIGLAGVAAILLLIGIRVPIGVAMGSTAFFGIWAMMGLKPAIGITKAIPFNLIGDWNLSAIPMFLFMGFVAVEARL
TRGLFGAARIFLARIPGGLASSTVFASALFGAASGSSVATSAAFSRIAVPEMLDSKYNPGLATGAVAASGTLAALIPPSV
LMIVYCLLVDTSINTLFMAGVIPGILTATAFILMITTRCMLNPGLAPRYVDHTTRAEKIALLRDAWPLPLVTFIVMGGIF
TGAFTATESGAVGAFLACLIALARGRMNLAMLKRSIIDTAAGTSAIFMIVLGAALFARFIALATIPTWVMGFFDGYSAMT
VVILICIILVLMGTFMEEISIMLLTMPVLAPLLAQHGIDLIWFGILVIKLMTIGLISPPVGMNVFVIKTSLGNRVTLNQI
FGGVTWFIMVDLLVLAALIAFPQISLWLPGMMTTTR
>Mature_436_residues
MERLEIGLAGVAAILLLIGIRVPIGVAMGSTAFFGIWAMMGLKPAIGITKAIPFNLIGDWNLSAIPMFLFMGFVAVEARL
TRGLFGAARIFLARIPGGLASSTVFASALFGAASGSSVATSAAFSRIAVPEMLDSKYNPGLATGAVAASGTLAALIPPSV
LMIVYCLLVDTSINTLFMAGVIPGILTATAFILMITTRCMLNPGLAPRYVDHTTRAEKIALLRDAWPLPLVTFIVMGGIF
TGAFTATESGAVGAFLACLIALARGRMNLAMLKRSIIDTAAGTSAIFMIVLGAALFARFIALATIPTWVMGFFDGYSAMT
VVILICIILVLMGTFMEEISIMLLTMPVLAPLLAQHGIDLIWFGILVIKLMTIGLISPPVGMNVFVIKTSLGNRVTLNQI
FGGVTWFIMVDLLVLAALIAFPQISLWLPGMMTTTR

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=326, Percent_Identity=33.1288343558282, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 46048; Mature: 46048

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLEIGLAGVAAILLLIGIRVPIGVAMGSTAFFGIWAMMGLKPAIGITKAIPFNLIGDW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHCCHHHCCCCCEECCC
NLSAIPMFLFMGFVAVEARLTRGLFGAARIFLARIPGGLASSTVFASALFGAASGSSVAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHH
SAAFSRIAVPEMLDSKYNPGLATGAVAASGTLAALIPPSVLMIVYCLLVDTSINTLFMAG
HHHHHHHCCHHHHCCCCCCCCCHHHHHCCCCCHHHCCHHHHHHHHHHHHHCCHHHHHHHH
VIPGILTATAFILMITTRCMLNPGLAPRYVDHTTRAEKIALLRDAWPLPLVTFIVMGGIF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TGAFTATESGAVGAFLACLIALARGRMNLAMLKRSIIDTAAGTSAIFMIVLGAALFARFI
HHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ALATIPTWVMGFFDGYSAMTVVILICIILVLMGTFMEEISIMLLTMPVLAPLLAQHGIDL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IWFGILVIKLMTIGLISPPVGMNVFVIKTSLGNRVTLNQIFGGVTWFIMVDLLVLAALIA
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
FPQISLWLPGMMTTTR
CCCHHHHCCCCCCCCC
>Mature Secondary Structure
MERLEIGLAGVAAILLLIGIRVPIGVAMGSTAFFGIWAMMGLKPAIGITKAIPFNLIGDW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHCCHHHCCCCCEECCC
NLSAIPMFLFMGFVAVEARLTRGLFGAARIFLARIPGGLASSTVFASALFGAASGSSVAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHH
SAAFSRIAVPEMLDSKYNPGLATGAVAASGTLAALIPPSVLMIVYCLLVDTSINTLFMAG
HHHHHHHCCHHHHCCCCCCCCCHHHHHCCCCCHHHCCHHHHHHHHHHHHHCCHHHHHHHH
VIPGILTATAFILMITTRCMLNPGLAPRYVDHTTRAEKIALLRDAWPLPLVTFIVMGGIF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TGAFTATESGAVGAFLACLIALARGRMNLAMLKRSIIDTAAGTSAIFMIVLGAALFARFI
HHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ALATIPTWVMGFFDGYSAMTVVILICIILVLMGTFMEEISIMLLTMPVLAPLLAQHGIDL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IWFGILVIKLMTIGLISPPVGMNVFVIKTSLGNRVTLNQIFGGVTWFIMVDLLVLAALIA
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
FPQISLWLPGMMTTTR
CCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]