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The map label for this gene is yfiZ [H]

Identifier: 119386244

GI number: 119386244

Start: 683199

End: 683549

Strand: Direct

Name: yfiZ [H]

Synonym: Pden_3533

Alternate gene names: 119386244

Gene position: 683199-683549 (Clockwise)

Preceding gene: 119386243

Following gene: 119386245

Centisome position: 39.49

GC content: 71.51

Gene sequence:

>351_bases
ATGGCGCTGGGACATGACACCGGCCGCGCGCTGGGGCTGAGGCCGGAACGCTTCTGGGCGGCCGCCTGCCTGTCGGTGAT
GATCCTTGCCGGCGCCGCCACCGCCGCCGCCGGTCCCATCGGCTTCGTCGGGCTGGTCGCACCGCATATCGCGCGCGCCG
TCACCGGGCCGGACAATCGCCGCGTGCTGCCGCTTTCCGCATTGTTCGCGGCCTCGACCCTGCTGGGGGCGGACATCCTG
GGCCGTATCGTCGCGCCCCCGAACGAGATCGCGGCCGGCATCGTCGCGACGATCCTGGGTGGCCCGTTCTTCATCCATGT
CGTGCGCCGCTTCAGGCTGGCACGGCTATGA

Upstream 100 bases:

>100_bases
GCCCTGGAGGGGCGCGGCCGCGCCGTCGCGCTGACCATGGGCGTGACGCTGGTCCTGGGGGGGGGCGCTGGCCCTGGCGC
TGGCGCCGGGGCTGAACGCC

Downstream 100 bases:

>100_bases
TTCTGCCCCGGACCCGTGCCCTTCGCATCGGCGGCGCCTCGGTCCTGTGGCGCCCGCGCAGCGTGACCGTCTGCCTGGCG
CTGTGCCTGCTGTGCCTTGT

Product: transport system permease protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MALGHDTGRALGLRPERFWAAACLSVMILAGAATAAAGPIGFVGLVAPHIARAVTGPDNRRVLPLSALFAASTLLGADIL
GRIVAPPNEIAAGIVATILGGPFFIHVVRRFRLARL

Sequences:

>Translated_116_residues
MALGHDTGRALGLRPERFWAAACLSVMILAGAATAAAGPIGFVGLVAPHIARAVTGPDNRRVLPLSALFAASTLLGADIL
GRIVAPPNEIAAGIVATILGGPFFIHVVRRFRLARL
>Mature_115_residues
ALGHDTGRALGLRPERFWAAACLSVMILAGAATAAAGPIGFVGLVAPHIARAVTGPDNRRVLPLSALFAASTLLGADILG
RIVAPPNEIAAGIVATILGGPFFIHVVRRFRLARL

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen (Probable) [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790741, Length=105, Percent_Identity=40.9523809523809, Blast_Score=81, Evalue=2e-17,
Organism=Escherichia coli, GI1786805, Length=110, Percent_Identity=42.7272727272727, Blast_Score=81, Evalue=2e-17,
Organism=Escherichia coli, GI1790740, Length=114, Percent_Identity=42.1052631578947, Blast_Score=75, Evalue=9e-16,
Organism=Escherichia coli, GI1786347, Length=113, Percent_Identity=39.8230088495575, Blast_Score=65, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 11942; Mature: 11811

Theoretical pI: Translated: 12.26; Mature: 12.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALGHDTGRALGLRPERFWAAACLSVMILAGAATAAAGPIGFVGLVAPHIARAVTGPDNR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
RVLPLSALFAASTLLGADILGRIVAPPNEIAAGIVATILGGPFFIHVVRRFRLARL
EEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALGHDTGRALGLRPERFWAAACLSVMILAGAATAAAGPIGFVGLVAPHIARAVTGPDNR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
RVLPLSALFAASTLLGADILGRIVAPPNEIAAGIVATILGGPFFIHVVRRFRLARL
EEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]