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The map label for this gene is yiaN [C]

Identifier: 119386210

GI number: 119386210

Start: 644585

End: 645904

Strand: Direct

Name: yiaN [C]

Synonym: Pden_3499

Alternate gene names: 119386210

Gene position: 644585-645904 (Clockwise)

Preceding gene: 119386209

Following gene: 119386212

Centisome position: 37.26

GC content: 65.53

Gene sequence:

>1320_bases
ATGACCGGGATCGCCGCCGGGCTGACGGGTTTCGGGGTATTGCTGGCGCTGATGGCCATCCGCATCCCCATCGCGGTCGC
GATGCTTGCGACGGGCATCGTGGGATACGGGCTGGTCAGCGGGTGGATGCCGCTGCTCGCCTTTCTCAAGACCAATACCT
ATTACCAGTTCTCCACCTATTCGCTGTCGGTGATCCCGCTTTTCGTGCTGATGGGCGAATTCGCCACCCATGCGGGGATG
AGCCGGGCGCTTTACCGCGCCGCCGCGGCCTTCATGGGGCATCTGCGCGGCGGGCTGGCCATGGCCTCGATCGGGGGTTG
CGCGGCCTTCGGGGCGATCTGCGGGTCGTCCCTGGCGACGGCGGCGACCATGGGCCAGGTCGCCCTGCCCGAGATGAAGC
GCTATAACTACTCGGGCGCGCTGGCCACCGGCTCGCTGGCCGCGGGCGGCACGATGGGCATCCTGATCCCGCCCTCGGTG
ATCCTGGTGCTTTACGCGCTGATGACCGAACAAAGCATCGCCAAGATGTTCGTCGCGGCCATGGTGCCCGGCGTGATCGC
GGCGCTGGGCTACATGCTGGCGGTCGCCATCTTCGTGCGCCGCCGCCCCGAGGCCGGCCCGGCCGGGCCCCGCGCCAGCT
GGTCCGAGCGATTGGCGTCGCTGAAGGAAACCTGGTCGATCATCCTGATCTTCGCGCTGGTGATCGTCGGCATGTATCGC
GGCTGGTTCACGCCAACCGAGGCCGCAGCGGTCGGCGCCTTCGGTGCCTTCGTGCTGGCGGTTCTGCATGGCGGGCTGCG
GCTGAAGGGGCTGATCGATTGCCTGCAGGGCACGGCGCGGACCTCGGCCATGATCTTCCTGATCATGCTGGGTGCCGAGA
TGTTCAACGCCTTCCTTTCGGCCACGCAGACGCCGATGCTTGCCTCGCAGATGATCGTCGAGGCGGGGCTGTCGCCGATG
ATGGTGCTGGTCGCCATCCTGCTTTTGTATCTGGCGATGGGCTGCGTGATGGATTCCATGTCCATGCTGCTGCTGACCAT
CCCGATCTTTTATCCGATCATCGCCGGGCTGGATTTCGGCATGGGCCGCGAGGATACGCTGATCTGGTTCGGCATCCTGG
CGGTCGTCGTGGTCGAGGTCGGGTTGATCACCCCTCCGGTCGGGATGAACGTCTTTGTCATCAACGCCATGGCCAAGGAC
GTGCCGATGTGGGAAAGCTTCAAGGGGGTCATGCCCTTCCTGATCTCGGACCTGCTGCGGATCGTGCTGCTGGTCGCCTT
TCCGGCGATCACCCTGGGACTGGTGCGGGCGCTGGGATAG

Upstream 100 bases:

>100_bases
TCCCGATCTGGTGGAGCTTCATCATCGCCATGCCGGCGATGGCACTGCTGATCGTGACGACCTTCTTTACCCTGATCGGC
CATGTCGGAAAGGCGCGCGC

Downstream 100 bases:

>100_bases
GCGCCCGCCCTGGCCGGCTGGGCCACAGCCGGCCATATGCATCATAGCGTGGTGACCAGTGCGGGGATCTGACGCTCGAA
GAAATCCGAGAACGCGGCGA

Product: TRAP dicarboxylate transporter, DctM subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MTGIAAGLTGFGVLLALMAIRIPIAVAMLATGIVGYGLVSGWMPLLAFLKTNTYYQFSTYSLSVIPLFVLMGEFATHAGM
SRALYRAAAAFMGHLRGGLAMASIGGCAAFGAICGSSLATAATMGQVALPEMKRYNYSGALATGSLAAGGTMGILIPPSV
ILVLYALMTEQSIAKMFVAAMVPGVIAALGYMLAVAIFVRRRPEAGPAGPRASWSERLASLKETWSIILIFALVIVGMYR
GWFTPTEAAAVGAFGAFVLAVLHGGLRLKGLIDCLQGTARTSAMIFLIMLGAEMFNAFLSATQTPMLASQMIVEAGLSPM
MVLVAILLLYLAMGCVMDSMSMLLLTIPIFYPIIAGLDFGMGREDTLIWFGILAVVVVEVGLITPPVGMNVFVINAMAKD
VPMWESFKGVMPFLISDLLRIVLLVAFPAITLGLVRALG

Sequences:

>Translated_439_residues
MTGIAAGLTGFGVLLALMAIRIPIAVAMLATGIVGYGLVSGWMPLLAFLKTNTYYQFSTYSLSVIPLFVLMGEFATHAGM
SRALYRAAAAFMGHLRGGLAMASIGGCAAFGAICGSSLATAATMGQVALPEMKRYNYSGALATGSLAAGGTMGILIPPSV
ILVLYALMTEQSIAKMFVAAMVPGVIAALGYMLAVAIFVRRRPEAGPAGPRASWSERLASLKETWSIILIFALVIVGMYR
GWFTPTEAAAVGAFGAFVLAVLHGGLRLKGLIDCLQGTARTSAMIFLIMLGAEMFNAFLSATQTPMLASQMIVEAGLSPM
MVLVAILLLYLAMGCVMDSMSMLLLTIPIFYPIIAGLDFGMGREDTLIWFGILAVVVVEVGLITPPVGMNVFVINAMAKD
VPMWESFKGVMPFLISDLLRIVLLVAFPAITLGLVRALG
>Mature_438_residues
TGIAAGLTGFGVLLALMAIRIPIAVAMLATGIVGYGLVSGWMPLLAFLKTNTYYQFSTYSLSVIPLFVLMGEFATHAGMS
RALYRAAAAFMGHLRGGLAMASIGGCAAFGAICGSSLATAATMGQVALPEMKRYNYSGALATGSLAAGGTMGILIPPSVI
LVLYALMTEQSIAKMFVAAMVPGVIAALGYMLAVAIFVRRRPEAGPAGPRASWSERLASLKETWSIILIFALVIVGMYRG
WFTPTEAAAVGAFGAFVLAVLHGGLRLKGLIDCLQGTARTSAMIFLIMLGAEMFNAFLSATQTPMLASQMIVEAGLSPMM
VLVAILLLYLAMGCVMDSMSMLLLTIPIFYPIIAGLDFGMGREDTLIWFGILAVVVVEVGLITPPVGMNVFVINAMAKDV
PMWESFKGVMPFLISDLLRIVLLVAFPAITLGLVRALG

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=413, Percent_Identity=28.8135593220339, Blast_Score=127, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 46200; Mature: 46068

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGIAAGLTGFGVLLALMAIRIPIAVAMLATGIVGYGLVSGWMPLLAFLKTNTYYQFSTY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
SLSVIPLFVLMGEFATHAGMSRALYRAAAAFMGHLRGGLAMASIGGCAAFGAICGSSLAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AATMGQVALPEMKRYNYSGALATGSLAAGGTMGILIPPSVILVLYALMTEQSIAKMFVAA
HHHHCHHHCHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
MVPGVIAALGYMLAVAIFVRRRPEAGPAGPRASWSERLASLKETWSIILIFALVIVGMYR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWFTPTEAAAVGAFGAFVLAVLHGGLRLKGLIDCLQGTARTSAMIFLIMLGAEMFNAFLS
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
ATQTPMLASQMIVEAGLSPMMVLVAILLLYLAMGCVMDSMSMLLLTIPIFYPIIAGLDFG
HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
MGREDTLIWFGILAVVVVEVGLITPPVGMNVFVINAMAKDVPMWESFKGVMPFLISDLLR
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHH
IVLLVAFPAITLGLVRALG
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGIAAGLTGFGVLLALMAIRIPIAVAMLATGIVGYGLVSGWMPLLAFLKTNTYYQFSTY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
SLSVIPLFVLMGEFATHAGMSRALYRAAAAFMGHLRGGLAMASIGGCAAFGAICGSSLAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AATMGQVALPEMKRYNYSGALATGSLAAGGTMGILIPPSVILVLYALMTEQSIAKMFVAA
HHHHCHHHCHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
MVPGVIAALGYMLAVAIFVRRRPEAGPAGPRASWSERLASLKETWSIILIFALVIVGMYR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWFTPTEAAAVGAFGAFVLAVLHGGLRLKGLIDCLQGTARTSAMIFLIMLGAEMFNAFLS
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
ATQTPMLASQMIVEAGLSPMMVLVAILLLYLAMGCVMDSMSMLLLTIPIFYPIIAGLDFG
HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
MGREDTLIWFGILAVVVVEVGLITPPVGMNVFVINAMAKDVPMWESFKGVMPFLISDLLR
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHH
IVLLVAFPAITLGLVRALG
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]