Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
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Accession | NC_008687 |
Length | 1,730,097 |
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The map label for this gene is 119386209
Identifier: 119386209
GI number: 119386209
Start: 644067
End: 644588
Strand: Direct
Name: 119386209
Synonym: Pden_3498
Alternate gene names: NA
Gene position: 644067-644588 (Clockwise)
Preceding gene: 119386208
Following gene: 119386210
Centisome position: 37.23
GC content: 65.13
Gene sequence:
>522_bases ATGACCGAAGCCGAACCCCTGACCGAACAGCCCCATCCGGTGCCGGTGCCCGGCTGGCTGGTCGCCCTCTGCCGCTGGTT TGCCGCCATCGGGGGCGTGGCGCTGCTGGCGATGATGCTGATGACCGTGGCCAGCGTCGGGCTGCGATCCGTCCTGGGCT GGCCGATCCCCGGCGATTTCGAGCTGGTCGAGGTTCTTTCGGCCATCACCATCTTCTGCTTCCTGCCCTGGTGCCAGGTC ATAGGCGGCAACGTGCTGGTCGATTTCTTCACCATGAAGGCCGGCCCGCGCACCAACCACGCGCTGGAGGCGCTGGGCGA CCTGGTCTACCTGGCGATCGGGGTGCTGCTGACCTGGCGGCTGTGGCACGGGGCGGTGGATTTCTACAGTTATGGGGAAC AGACCATGGTGCTGCGCATCCCGATCTGGTGGAGCTTCATCATCGCCATGCCGGCGATGGCACTGCTGATCGTGACGACC TTCTTTACCCTGATCGGCCATGTCGGAAAGGCGCGCGCATGA
Upstream 100 bases:
>100_bases AGGCCATGGACGGCCGCGGCCTGGACGGACAGGCGATGCTGGACGACGCGCGCGCCATGCTGGCCGCGGCCGGCGCCGAG TAAGGGGAGGCGAGGGCGAC
Downstream 100 bases:
>100_bases CCGGGATCGCCGCCGGGCTGACGGGTTTCGGGGTATTGCTGGCGCTGATGGCCATCCGCATCCCCATCGCGGTCGCGATG CTTGCGACGGGCATCGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTEAEPLTEQPHPVPVPGWLVALCRWFAAIGGVALLAMMLMTVASVGLRSVLGWPIPGDFELVEVLSAITIFCFLPWCQV IGGNVLVDFFTMKAGPRTNHALEALGDLVYLAIGVLLTWRLWHGAVDFYSYGEQTMVLRIPIWWSFIIAMPAMALLIVTT FFTLIGHVGKARA
Sequences:
>Translated_173_residues MTEAEPLTEQPHPVPVPGWLVALCRWFAAIGGVALLAMMLMTVASVGLRSVLGWPIPGDFELVEVLSAITIFCFLPWCQV IGGNVLVDFFTMKAGPRTNHALEALGDLVYLAIGVLLTWRLWHGAVDFYSYGEQTMVLRIPIWWSFIIAMPAMALLIVTT FFTLIGHVGKARA >Mature_172_residues TEAEPLTEQPHPVPVPGWLVALCRWFAAIGGVALLAMMLMTVASVGLRSVLGWPIPGDFELVEVLSAITIFCFLPWCQVI GGNVLVDFFTMKAGPRTNHALEALGDLVYLAIGVLLTWRLWHGAVDFYSYGEQTMVLRIPIWWSFIIAMPAMALLIVTTF FTLIGHVGKARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19043; Mature: 18912
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAEPLTEQPHPVPVPGWLVALCRWFAAIGGVALLAMMLMTVASVGLRSVLGWPIPGDF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH ELVEVLSAITIFCFLPWCQVIGGNVLVDFFTMKAGPRTNHALEALGDLVYLAIGVLLTWR HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LWHGAVDFYSYGEQTMVLRIPIWWSFIIAMPAMALLIVTTFFTLIGHVGKARA HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TEAEPLTEQPHPVPVPGWLVALCRWFAAIGGVALLAMMLMTVASVGLRSVLGWPIPGDF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH ELVEVLSAITIFCFLPWCQVIGGNVLVDFFTMKAGPRTNHALEALGDLVYLAIGVLLTWR HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LWHGAVDFYSYGEQTMVLRIPIWWSFIIAMPAMALLIVTTFFTLIGHVGKARA HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA