Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
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Accession | NC_008687 |
Length | 1,730,097 |
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The map label for this gene is 119386206
Identifier: 119386206
GI number: 119386206
Start: 640856
End: 641701
Strand: Direct
Name: 119386206
Synonym: Pden_3495
Alternate gene names: NA
Gene position: 640856-641701 (Clockwise)
Preceding gene: 119386205
Following gene: 119386207
Centisome position: 37.04
GC content: 67.38
Gene sequence:
>846_bases ATGTCTGACCCGGCCGGCAAACCCTGCATCATCTGCGTCGCCATCACCGGCAGCCTGCCGACCAAGGAAAACAACCCGGC GGTGCCGATCACCTTGGCCGAACAGGTCGAATCGACGCATGAGGCGTTCGAGGCCGGCGCCTCGATCGCCCATTGCCATG TCCGCGACGACGAGGGGCGCCCGACCAGCGACCCGGACCGCTTCGCCGCACTGAAGGAAGGGCTGGAGAGGCATTGCCCC GGCATGATCGTCCAGCTTTCGACCGGCGGGCGGTCGGGGGCGGGGCAGGCGCGGGGGGCCATGCTGCCGCTTTGTCCCGA CATGGCGTCCTTGTCCGTGGGGTCCAACAACTTCCCGACCCGGGTCTATGAAAACCCGCCGGACCTGGTGGACTGGCTGG CCGCCGAGATGCTGAAATACGACATCAAGCCGGAAATCGAGGCGTTCGACCTGTCCCATATCCTGCAAGCGAAAAGGATG GCCGGGGACGGGCGGCTGGCCGGCACCCCCTATGTGCAATTCGTGATGGGGGTCAGGAACGCCATGCCCGCCGACCGCGA CGTCTTCGACTATTACATCCATACGGTCAGGCGGCTCTTCGGCGAGGACGCGCCCTGGTGCGCGGCCGGGATCGGGCCGA GCCAGATCGTGCTGAACGAATGGGCGATCTCCTCGGGCGGGCACGCACGCACCGGGCTCGAGGACAACGTGCGGCTGGAC CGGGACCGGCTGGCGCCCTCGAATGCCGCGCTGGTCGGCCGTGCGGTCGAACTGTGCGAGAAATACGAACGCCCCGTCGC GACATGGCGGCAGGCGCGGCAGATCCTTGGGCTGCGGATGGTCTGA
Upstream 100 bases:
>100_bases CGCCGCGCCACGCTGATCGCGAAACGCACCATGCGCGACGGTGTCCCGGTCTATCGCTTCGACATTCGCCTGCAGGGCGA GGACGAGACGGTGTTCTTCG
Downstream 100 bases:
>100_bases TGGCGGTGGGCACCTTGTTCGGACAGCTTTACGGCGACGACGAGATGGCAGCGATCCTGTCGGATCGCTCGGCCATCCTG GCCATGCTGCGGGTCGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSDPAGKPCIICVAITGSLPTKENNPAVPITLAEQVESTHEAFEAGASIAHCHVRDDEGRPTSDPDRFAALKEGLERHCP GMIVQLSTGGRSGAGQARGAMLPLCPDMASLSVGSNNFPTRVYENPPDLVDWLAAEMLKYDIKPEIEAFDLSHILQAKRM AGDGRLAGTPYVQFVMGVRNAMPADRDVFDYYIHTVRRLFGEDAPWCAAGIGPSQIVLNEWAISSGGHARTGLEDNVRLD RDRLAPSNAALVGRAVELCEKYERPVATWRQARQILGLRMV
Sequences:
>Translated_281_residues MSDPAGKPCIICVAITGSLPTKENNPAVPITLAEQVESTHEAFEAGASIAHCHVRDDEGRPTSDPDRFAALKEGLERHCP GMIVQLSTGGRSGAGQARGAMLPLCPDMASLSVGSNNFPTRVYENPPDLVDWLAAEMLKYDIKPEIEAFDLSHILQAKRM AGDGRLAGTPYVQFVMGVRNAMPADRDVFDYYIHTVRRLFGEDAPWCAAGIGPSQIVLNEWAISSGGHARTGLEDNVRLD RDRLAPSNAALVGRAVELCEKYERPVATWRQARQILGLRMV >Mature_280_residues SDPAGKPCIICVAITGSLPTKENNPAVPITLAEQVESTHEAFEAGASIAHCHVRDDEGRPTSDPDRFAALKEGLERHCPG MIVQLSTGGRSGAGQARGAMLPLCPDMASLSVGSNNFPTRVYENPPDLVDWLAAEMLKYDIKPEIEAFDLSHILQAKRMA GDGRLAGTPYVQFVMGVRNAMPADRDVFDYYIHTVRRLFGEDAPWCAAGIGPSQIVLNEWAISSGGHARTGLEDNVRLDR DRLAPSNAALVGRAVELCEKYERPVATWRQARQILGLRMV
Specific function: Unknown
COG id: COG3246
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30562; Mature: 30431
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPAGKPCIICVAITGSLPTKENNPAVPITLAEQVESTHEAFEAGASIAHCHVRDDEGR CCCCCCCCEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCCC PTSDPDRFAALKEGLERHCPGMIVQLSTGGRSGAGQARGAMLPLCPDMASLSVGSNNFPT CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC RVYENPPDLVDWLAAEMLKYDIKPEIEAFDLSHILQAKRMAGDGRLAGTPYVQFVMGVRN CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AMPADRDVFDYYIHTVRRLFGEDAPWCAAGIGPSQIVLNEWAISSGGHARTGLEDNVRLD CCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHEEHHHHCCCCCCCCCCCCCCCCEEC RDRLAPSNAALVGRAVELCEKYERPVATWRQARQILGLRMV HHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDPAGKPCIICVAITGSLPTKENNPAVPITLAEQVESTHEAFEAGASIAHCHVRDDEGR CCCCCCCEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCCC PTSDPDRFAALKEGLERHCPGMIVQLSTGGRSGAGQARGAMLPLCPDMASLSVGSNNFPT CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC RVYENPPDLVDWLAAEMLKYDIKPEIEAFDLSHILQAKRMAGDGRLAGTPYVQFVMGVRN CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AMPADRDVFDYYIHTVRRLFGEDAPWCAAGIGPSQIVLNEWAISSGGHARTGLEDNVRLD CCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHEEHHHHCCCCCCCCCCCCCCCCEEC RDRLAPSNAALVGRAVELCEKYERPVATWRQARQILGLRMV HHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA