Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119386206

Identifier: 119386206

GI number: 119386206

Start: 640856

End: 641701

Strand: Direct

Name: 119386206

Synonym: Pden_3495

Alternate gene names: NA

Gene position: 640856-641701 (Clockwise)

Preceding gene: 119386205

Following gene: 119386207

Centisome position: 37.04

GC content: 67.38

Gene sequence:

>846_bases
ATGTCTGACCCGGCCGGCAAACCCTGCATCATCTGCGTCGCCATCACCGGCAGCCTGCCGACCAAGGAAAACAACCCGGC
GGTGCCGATCACCTTGGCCGAACAGGTCGAATCGACGCATGAGGCGTTCGAGGCCGGCGCCTCGATCGCCCATTGCCATG
TCCGCGACGACGAGGGGCGCCCGACCAGCGACCCGGACCGCTTCGCCGCACTGAAGGAAGGGCTGGAGAGGCATTGCCCC
GGCATGATCGTCCAGCTTTCGACCGGCGGGCGGTCGGGGGCGGGGCAGGCGCGGGGGGCCATGCTGCCGCTTTGTCCCGA
CATGGCGTCCTTGTCCGTGGGGTCCAACAACTTCCCGACCCGGGTCTATGAAAACCCGCCGGACCTGGTGGACTGGCTGG
CCGCCGAGATGCTGAAATACGACATCAAGCCGGAAATCGAGGCGTTCGACCTGTCCCATATCCTGCAAGCGAAAAGGATG
GCCGGGGACGGGCGGCTGGCCGGCACCCCCTATGTGCAATTCGTGATGGGGGTCAGGAACGCCATGCCCGCCGACCGCGA
CGTCTTCGACTATTACATCCATACGGTCAGGCGGCTCTTCGGCGAGGACGCGCCCTGGTGCGCGGCCGGGATCGGGCCGA
GCCAGATCGTGCTGAACGAATGGGCGATCTCCTCGGGCGGGCACGCACGCACCGGGCTCGAGGACAACGTGCGGCTGGAC
CGGGACCGGCTGGCGCCCTCGAATGCCGCGCTGGTCGGCCGTGCGGTCGAACTGTGCGAGAAATACGAACGCCCCGTCGC
GACATGGCGGCAGGCGCGGCAGATCCTTGGGCTGCGGATGGTCTGA

Upstream 100 bases:

>100_bases
CGCCGCGCCACGCTGATCGCGAAACGCACCATGCGCGACGGTGTCCCGGTCTATCGCTTCGACATTCGCCTGCAGGGCGA
GGACGAGACGGTGTTCTTCG

Downstream 100 bases:

>100_bases
TGGCGGTGGGCACCTTGTTCGGACAGCTTTACGGCGACGACGAGATGGCAGCGATCCTGTCGGATCGCTCGGCCATCCTG
GCCATGCTGCGGGTCGAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSDPAGKPCIICVAITGSLPTKENNPAVPITLAEQVESTHEAFEAGASIAHCHVRDDEGRPTSDPDRFAALKEGLERHCP
GMIVQLSTGGRSGAGQARGAMLPLCPDMASLSVGSNNFPTRVYENPPDLVDWLAAEMLKYDIKPEIEAFDLSHILQAKRM
AGDGRLAGTPYVQFVMGVRNAMPADRDVFDYYIHTVRRLFGEDAPWCAAGIGPSQIVLNEWAISSGGHARTGLEDNVRLD
RDRLAPSNAALVGRAVELCEKYERPVATWRQARQILGLRMV

Sequences:

>Translated_281_residues
MSDPAGKPCIICVAITGSLPTKENNPAVPITLAEQVESTHEAFEAGASIAHCHVRDDEGRPTSDPDRFAALKEGLERHCP
GMIVQLSTGGRSGAGQARGAMLPLCPDMASLSVGSNNFPTRVYENPPDLVDWLAAEMLKYDIKPEIEAFDLSHILQAKRM
AGDGRLAGTPYVQFVMGVRNAMPADRDVFDYYIHTVRRLFGEDAPWCAAGIGPSQIVLNEWAISSGGHARTGLEDNVRLD
RDRLAPSNAALVGRAVELCEKYERPVATWRQARQILGLRMV
>Mature_280_residues
SDPAGKPCIICVAITGSLPTKENNPAVPITLAEQVESTHEAFEAGASIAHCHVRDDEGRPTSDPDRFAALKEGLERHCPG
MIVQLSTGGRSGAGQARGAMLPLCPDMASLSVGSNNFPTRVYENPPDLVDWLAAEMLKYDIKPEIEAFDLSHILQAKRMA
GDGRLAGTPYVQFVMGVRNAMPADRDVFDYYIHTVRRLFGEDAPWCAAGIGPSQIVLNEWAISSGGHARTGLEDNVRLDR
DRLAPSNAALVGRAVELCEKYERPVATWRQARQILGLRMV

Specific function: Unknown

COG id: COG3246

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30562; Mature: 30431

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00086 CYTOCHROME_P450

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPAGKPCIICVAITGSLPTKENNPAVPITLAEQVESTHEAFEAGASIAHCHVRDDEGR
CCCCCCCCEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCCC
PTSDPDRFAALKEGLERHCPGMIVQLSTGGRSGAGQARGAMLPLCPDMASLSVGSNNFPT
CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
RVYENPPDLVDWLAAEMLKYDIKPEIEAFDLSHILQAKRMAGDGRLAGTPYVQFVMGVRN
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
AMPADRDVFDYYIHTVRRLFGEDAPWCAAGIGPSQIVLNEWAISSGGHARTGLEDNVRLD
CCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHEEHHHHCCCCCCCCCCCCCCCCEEC
RDRLAPSNAALVGRAVELCEKYERPVATWRQARQILGLRMV
HHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDPAGKPCIICVAITGSLPTKENNPAVPITLAEQVESTHEAFEAGASIAHCHVRDDEGR
CCCCCCCEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCCC
PTSDPDRFAALKEGLERHCPGMIVQLSTGGRSGAGQARGAMLPLCPDMASLSVGSNNFPT
CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
RVYENPPDLVDWLAAEMLKYDIKPEIEAFDLSHILQAKRMAGDGRLAGTPYVQFVMGVRN
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
AMPADRDVFDYYIHTVRRLFGEDAPWCAAGIGPSQIVLNEWAISSGGHARTGLEDNVRLD
CCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHEEHHHHCCCCCCCCCCCCCCCCEEC
RDRLAPSNAALVGRAVELCEKYERPVATWRQARQILGLRMV
HHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA