Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
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Accession | NC_008687 |
Length | 1,730,097 |
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The map label for this gene is 119386197
Identifier: 119386197
GI number: 119386197
Start: 632340
End: 633242
Strand: Direct
Name: 119386197
Synonym: Pden_3486
Alternate gene names: NA
Gene position: 632340-633242 (Clockwise)
Preceding gene: 119386196
Following gene: 119386199
Centisome position: 36.55
GC content: 67.88
Gene sequence:
>903_bases ATGTACAAGGACAAGGATCCCCGTGCGGCCCTGTTCGCCGCGGCCTCGGCGCCGCCCCGCACCGGCCTGATCGCCGAGGA ACAGCTGGCCGAGTTCGACAAGACCCCGCCGCAGGAGGATGCCGACGGCCGCAAGGTCTGGTATCAGCGCGGCTGCAATT TCGTGCTGGCCCATGCCGAGGCGCAGCCGGGCGCGGCTTTCGTCCGCGCGGGCCAGCCCGATGAATATGTCGTGCTGCTG CCCGACCATCCCGCGCTGATCGAGGCGAATGGCGAGAGTTGCGAGGTCGCCGCCAATTCCATCGTCTTCGTGCCGCCGGG CGACAGCCGGGTGACGCTGCCCGAAGGGGGCAGGGTGGTCCGGCTGTTCACCGCCGCCGCCGCGGATCTGGTCGCCCTGT GTCCCAATGCCGATGCCTATGCGGCGGGGCGTAGCCATATCCCGCCCTTCGAGCCATGGCCCGAACCCGTCGGGGGCTTC AGGATCCGCGCCTATGACCTGGACGTGAAGCCGCAGGAGGGACGTTTCGGCCGCATCTTCCGCTGCACGACCTTCATGGT GAACCTGCTTGACGTGCAGAAAGGCCCGCGCGACCCCAGGAAGCTGTCGCCCCATCACCACGACGATTTCGAGCAATGCT CGCTGGCGCTTGCCGGCAGCTTCGTCCATCACCTGCGCTGGCCCTGGACGGTGGATCGCAGCGACTGGCGCCAGGACCGG CATATCGCGGTCGGCTCGCCTTCGTCGCTGGTGATCCCACCGCCGGTCGTCCACACGACCGAAGCCAGCGGGGCGGGCGA CAATGTGCTGGTGGACATCTTCTGTCCGCCGCGGCTGGATTTCTCGATGCAGGACGGCTGGGTGCTGAACGATGCCGACT ATCCGGTGATCTCCCGGCGCTGA
Upstream 100 bases:
>100_bases CGTCTGCGGCTCGGATCAGGGGCTGCTGATGAAGGGCGCGCGCCGGATCATCGAGGCGGGCCGCGCCTGACGCCCGCGCT GACAGGAAAGGATTTTCGCG
Downstream 100 bases:
>100_bases GGCAGGCGGAGCCGCCGCCTGCAACGGGCGGTCGGTTCGGCGCATCCCTTGGGACGCTGATGGCCGGTTCGGCTTTGCAG GCCTCTAGGCTTGCGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MYKDKDPRAALFAAASAPPRTGLIAEEQLAEFDKTPPQEDADGRKVWYQRGCNFVLAHAEAQPGAAFVRAGQPDEYVVLL PDHPALIEANGESCEVAANSIVFVPPGDSRVTLPEGGRVVRLFTAAAADLVALCPNADAYAAGRSHIPPFEPWPEPVGGF RIRAYDLDVKPQEGRFGRIFRCTTFMVNLLDVQKGPRDPRKLSPHHHDDFEQCSLALAGSFVHHLRWPWTVDRSDWRQDR HIAVGSPSSLVIPPPVVHTTEASGAGDNVLVDIFCPPRLDFSMQDGWVLNDADYPVISRR
Sequences:
>Translated_300_residues MYKDKDPRAALFAAASAPPRTGLIAEEQLAEFDKTPPQEDADGRKVWYQRGCNFVLAHAEAQPGAAFVRAGQPDEYVVLL PDHPALIEANGESCEVAANSIVFVPPGDSRVTLPEGGRVVRLFTAAAADLVALCPNADAYAAGRSHIPPFEPWPEPVGGF RIRAYDLDVKPQEGRFGRIFRCTTFMVNLLDVQKGPRDPRKLSPHHHDDFEQCSLALAGSFVHHLRWPWTVDRSDWRQDR HIAVGSPSSLVIPPPVVHTTEASGAGDNVLVDIFCPPRLDFSMQDGWVLNDADYPVISRR >Mature_300_residues MYKDKDPRAALFAAASAPPRTGLIAEEQLAEFDKTPPQEDADGRKVWYQRGCNFVLAHAEAQPGAAFVRAGQPDEYVVLL PDHPALIEANGESCEVAANSIVFVPPGDSRVTLPEGGRVVRLFTAAAADLVALCPNADAYAAGRSHIPPFEPWPEPVGGF RIRAYDLDVKPQEGRFGRIFRCTTFMVNLLDVQKGPRDPRKLSPHHHDDFEQCSLALAGSFVHHLRWPWTVDRSDWRQDR HIAVGSPSSLVIPPPVVHTTEASGAGDNVLVDIFCPPRLDFSMQDGWVLNDADYPVISRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33046; Mature: 33046
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKDKDPRAALFAAASAPPRTGLIAEEQLAEFDKTPPQEDADGRKVWYQRGCNFVLAHAE CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEECC AQPGAAFVRAGQPDEYVVLLPDHPALIEANGESCEVAANSIVFVPPGDSRVTLPEGGRVV CCCCEEEEECCCCCCEEEEECCCCEEEEECCCEEEEECCEEEEECCCCCEEECCCCCCEE RLFTAAAADLVALCPNADAYAAGRSHIPPFEPWPEPVGGFRIRAYDLDVKPQEGRFGRIF EEEEHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEE RCTTFMVNLLDVQKGPRDPRKLSPHHHDDFEQCSLALAGSFVHHLRWPWTVDRSDWRQDR EHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECHHHCCCCC HIAVGSPSSLVIPPPVVHTTEASGAGDNVLVDIFCPPRLDFSMQDGWVLNDADYPVISRR EEEECCCCCEEECCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCEECCC >Mature Secondary Structure MYKDKDPRAALFAAASAPPRTGLIAEEQLAEFDKTPPQEDADGRKVWYQRGCNFVLAHAE CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEECC AQPGAAFVRAGQPDEYVVLLPDHPALIEANGESCEVAANSIVFVPPGDSRVTLPEGGRVV CCCCEEEEECCCCCCEEEEECCCCEEEEECCCEEEEECCEEEEECCCCCEEECCCCCCEE RLFTAAAADLVALCPNADAYAAGRSHIPPFEPWPEPVGGFRIRAYDLDVKPQEGRFGRIF EEEEHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEE RCTTFMVNLLDVQKGPRDPRKLSPHHHDDFEQCSLALAGSFVHHLRWPWTVDRSDWRQDR EHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECHHHCCCCC HIAVGSPSSLVIPPPVVHTTEASGAGDNVLVDIFCPPRLDFSMQDGWVLNDADYPVISRR EEEECCCCCEEECCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA