Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is ydiI [C]

Identifier: 119357444

GI number: 119357444

Start: 1872604

End: 1873044

Strand: Direct

Name: ydiI [C]

Synonym: Cpha266_1643

Alternate gene names: 119357444

Gene position: 1872604-1873044 (Clockwise)

Preceding gene: 119357443

Following gene: 119357445

Centisome position: 59.75

GC content: 46.49

Gene sequence:

>441_bases
ATGGCGGCATCTTCTGTGTTCTTTGAATCGGTAAGTGTTGAAGAAATCAACAGTACCCAAATTATTGAAGGCCAGATGGC
CCACCATCTCGGCATTGAAATGGTTGATGTTTCGGCTGACTCCATGACAGCGAGAATGCCTGTTGATCACCGTACCATAC
AACGAATAGGCATTCTGCATGGCGGCGCATCACTCGCTCTTGCTGAAACTGTCGGCAGCATCGCAGCATCATTCTGCGTT
AACCGCGAATTATTCTTCATTGTGGGACAAGAGATCAATGCAAACCATATCCGACCAGTCAACGAGGGATTTGTCTACGC
AACAGCAACGCCCCTGCATCTTGGCAAAAACTCGCAGGTATGGGATATCAAAATAAAAAATGAAGCGGGAAAACTGGTTT
GTGTCAGCAGGTTTACCGTAGCAGTCCTGAAAAAACAGTAA

Upstream 100 bases:

>100_bases
AGTGTTTGCTTCCCAAGCAAAATGTCGCGAGTTCGAATCTCGTCACCCGCTCCCTTTTATAGACCTCCCTTGGCGCGCAT
CACCTAATATCCGACGATAT

Downstream 100 bases:

>100_bases
GTTTCGCAACAAGTTTCACCACCGGGCTGTTTTTCTCAAACAGCCGGTCAATTTTTCTCAAAACTTTTTATACCTTGTTC
CTTTCACAGAAGAGGTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MAASSVFFESVSVEEINSTQIIEGQMAHHLGIEMVDVSADSMTARMPVDHRTIQRIGILHGGASLALAETVGSIAASFCV
NRELFFIVGQEINANHIRPVNEGFVYATATPLHLGKNSQVWDIKIKNEAGKLVCVSRFTVAVLKKQ

Sequences:

>Translated_146_residues
MAASSVFFESVSVEEINSTQIIEGQMAHHLGIEMVDVSADSMTARMPVDHRTIQRIGILHGGASLALAETVGSIAASFCV
NRELFFIVGQEINANHIRPVNEGFVYATATPLHLGKNSQVWDIKIKNEAGKLVCVSRFTVAVLKKQ
>Mature_145_residues
AASSVFFESVSVEEINSTQIIEGQMAHHLGIEMVDVSADSMTARMPVDHRTIQRIGILHGGASLALAETVGSIAASFCVN
RELFFIVGQEINANHIRPVNEGFVYATATPLHLGKNSQVWDIKIKNEAGKLVCVSRFTVAVLKKQ

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Escherichia coli, GI1787976, Length=138, Percent_Identity=44.9275362318841, Blast_Score=122, Evalue=1e-29,
Organism=Escherichia coli, GI1786813, Length=138, Percent_Identity=44.2028985507246, Blast_Score=119, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15864; Mature: 15733

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASSVFFESVSVEEINSTQIIEGQMAHHLGIEMVDVSADSMTARMPVDHRTIQRIGILH
CCCCHHEEEECCCCCCCCEEEECCCHHHHCCEEEEEECCCCEEEECCCCHHHHHHEEEEE
GGASLALAETVGSIAASFCVNRELFFIVGQEINANHIRPVNEGFVYATATPLHLGKNSQV
CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEECEEEECCCCCE
WDIKIKNEAGKLVCVSRFTVAVLKKQ
EEEEECCCCCCEEEEEEEEEEEEECC
>Mature Secondary Structure 
AASSVFFESVSVEEINSTQIIEGQMAHHLGIEMVDVSADSMTARMPVDHRTIQRIGILH
CCCHHEEEECCCCCCCCEEEECCCHHHHCCEEEEEECCCCEEEECCCCHHHHHHEEEEE
GGASLALAETVGSIAASFCVNRELFFIVGQEINANHIRPVNEGFVYATATPLHLGKNSQV
CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEECEEEECCCCCE
WDIKIKNEAGKLVCVSRFTVAVLKKQ
EEEEECCCCCCEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]