Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119357418

Identifier: 119357418

GI number: 119357418

Start: 1838789

End: 1839409

Strand: Direct

Name: 119357418

Synonym: Cpha266_1617

Alternate gene names: NA

Gene position: 1838789-1839409 (Clockwise)

Preceding gene: 119357417

Following gene: 119357419

Centisome position: 58.67

GC content: 44.12

Gene sequence:

>621_bases
ATGTTCGAAGATATACCTAAGTCTCTGGGGAACATGAAGGTTCGAGAAGAGCGTCACCGATTACTTGAGATGCCACACAT
CGCTCCATTGACATCTTTCGTTCACGCACTTCGTGAAGAGATGGGATCTGATTATGCAATACCGTACTTCGATCCTCTTG
ACGGTGGTATTGTGGCACCAATGTTATTTCTCCTTGAAGCTCCAGGCCCAAAGGCCGTCGCATCAGGATTTATATCTCGC
AACAATCCAGATGAAACCGCTAAAAATACTTTTTTGCTCACAAAAGAGGCGGGAATAGACCGGAAAAGTACAGTTTTATG
GAATGTCGTACCCTGGTATATTGGTTCCGGTTCAAAGATACGACCAGCAACAATTCAAGATATAAAACCCGCTCTGGACA
GTTTGCGTTTACTCCTCTCTATGCTTACGAAGTTGCAATCTATTGTGCTCGTTGGTTGTAAAGCTGCATTGGTCGAATCG
GATGTCCGAAGAATGCATCCCGCTATTAAAGTCTTTAAAATTTCACATCCGAGTCCATTGTTCGTCAATCGCCTTCCCGG
TAACCGTGAAAAGTTGTTGGAAGAAATAAAACGGGTTGCGCATGCTGAGATACAGCTTTGA

Upstream 100 bases:

>100_bases
ACATTACAAAAGACTCGGTAGCACCTGTCGTCAGGAATGCGCTTGAATCCGATCCGTTTCTTAAATTGTATTGAGAACTA
TAATTATAAGTCACTGAATT

Downstream 100 bases:

>100_bases
TTGAGTTTATTTTTTTCTTCTTTCCACTCAGGCAGTGCAGGCCGACTGCTACTGACCTGTACATACCTCTCGACTCGCTC
CAAGCATCCCGCCACCCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Uracil-DNA Glycosylase Family Protein; Uracil-DNA Glycosylase Superfamily; Uracil-DNA Glycosylase-Like Protein

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MFEDIPKSLGNMKVREERHRLLEMPHIAPLTSFVHALREEMGSDYAIPYFDPLDGGIVAPMLFLLEAPGPKAVASGFISR
NNPDETAKNTFLLTKEAGIDRKSTVLWNVVPWYIGSGSKIRPATIQDIKPALDSLRLLLSMLTKLQSIVLVGCKAALVES
DVRRMHPAIKVFKISHPSPLFVNRLPGNREKLLEEIKRVAHAEIQL

Sequences:

>Translated_206_residues
MFEDIPKSLGNMKVREERHRLLEMPHIAPLTSFVHALREEMGSDYAIPYFDPLDGGIVAPMLFLLEAPGPKAVASGFISR
NNPDETAKNTFLLTKEAGIDRKSTVLWNVVPWYIGSGSKIRPATIQDIKPALDSLRLLLSMLTKLQSIVLVGCKAALVES
DVRRMHPAIKVFKISHPSPLFVNRLPGNREKLLEEIKRVAHAEIQL
>Mature_206_residues
MFEDIPKSLGNMKVREERHRLLEMPHIAPLTSFVHALREEMGSDYAIPYFDPLDGGIVAPMLFLLEAPGPKAVASGFISR
NNPDETAKNTFLLTKEAGIDRKSTVLWNVVPWYIGSGSKIRPATIQDIKPALDSLRLLLSMLTKLQSIVLVGCKAALVES
DVRRMHPAIKVFKISHPSPLFVNRLPGNREKLLEEIKRVAHAEIQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23026; Mature: 23026

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEDIPKSLGNMKVREERHRLLEMPHIAPLTSFVHALREEMGSDYAIPYFDPLDGGIVAP
CCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
MLFLLEAPGPKAVASGFISRNNPDETAKNTFLLTKEAGIDRKSTVLWNVVPWYIGSGSKI
HHHHHCCCCCHHHHHHHHCCCCCCHHHHCEEEEECCCCCCCCHHEEEEHHHHHCCCCCCC
RPATIQDIKPALDSLRLLLSMLTKLQSIVLVGCKAALVESDVRRMHPAIKVFKISHPSPL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCE
FVNRLPGNREKLLEEIKRVAHAEIQL
EEECCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFEDIPKSLGNMKVREERHRLLEMPHIAPLTSFVHALREEMGSDYAIPYFDPLDGGIVAP
CCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
MLFLLEAPGPKAVASGFISRNNPDETAKNTFLLTKEAGIDRKSTVLWNVVPWYIGSGSKI
HHHHHCCCCCHHHHHHHHCCCCCCHHHHCEEEEECCCCCCCCHHEEEEHHHHHCCCCCCC
RPATIQDIKPALDSLRLLLSMLTKLQSIVLVGCKAALVESDVRRMHPAIKVFKISHPSPL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCE
FVNRLPGNREKLLEEIKRVAHAEIQL
EEECCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA