Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357418
Identifier: 119357418
GI number: 119357418
Start: 1838789
End: 1839409
Strand: Direct
Name: 119357418
Synonym: Cpha266_1617
Alternate gene names: NA
Gene position: 1838789-1839409 (Clockwise)
Preceding gene: 119357417
Following gene: 119357419
Centisome position: 58.67
GC content: 44.12
Gene sequence:
>621_bases ATGTTCGAAGATATACCTAAGTCTCTGGGGAACATGAAGGTTCGAGAAGAGCGTCACCGATTACTTGAGATGCCACACAT CGCTCCATTGACATCTTTCGTTCACGCACTTCGTGAAGAGATGGGATCTGATTATGCAATACCGTACTTCGATCCTCTTG ACGGTGGTATTGTGGCACCAATGTTATTTCTCCTTGAAGCTCCAGGCCCAAAGGCCGTCGCATCAGGATTTATATCTCGC AACAATCCAGATGAAACCGCTAAAAATACTTTTTTGCTCACAAAAGAGGCGGGAATAGACCGGAAAAGTACAGTTTTATG GAATGTCGTACCCTGGTATATTGGTTCCGGTTCAAAGATACGACCAGCAACAATTCAAGATATAAAACCCGCTCTGGACA GTTTGCGTTTACTCCTCTCTATGCTTACGAAGTTGCAATCTATTGTGCTCGTTGGTTGTAAAGCTGCATTGGTCGAATCG GATGTCCGAAGAATGCATCCCGCTATTAAAGTCTTTAAAATTTCACATCCGAGTCCATTGTTCGTCAATCGCCTTCCCGG TAACCGTGAAAAGTTGTTGGAAGAAATAAAACGGGTTGCGCATGCTGAGATACAGCTTTGA
Upstream 100 bases:
>100_bases ACATTACAAAAGACTCGGTAGCACCTGTCGTCAGGAATGCGCTTGAATCCGATCCGTTTCTTAAATTGTATTGAGAACTA TAATTATAAGTCACTGAATT
Downstream 100 bases:
>100_bases TTGAGTTTATTTTTTTCTTCTTTCCACTCAGGCAGTGCAGGCCGACTGCTACTGACCTGTACATACCTCTCGACTCGCTC CAAGCATCCCGCCACCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Uracil-DNA Glycosylase Family Protein; Uracil-DNA Glycosylase Superfamily; Uracil-DNA Glycosylase-Like Protein
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MFEDIPKSLGNMKVREERHRLLEMPHIAPLTSFVHALREEMGSDYAIPYFDPLDGGIVAPMLFLLEAPGPKAVASGFISR NNPDETAKNTFLLTKEAGIDRKSTVLWNVVPWYIGSGSKIRPATIQDIKPALDSLRLLLSMLTKLQSIVLVGCKAALVES DVRRMHPAIKVFKISHPSPLFVNRLPGNREKLLEEIKRVAHAEIQL
Sequences:
>Translated_206_residues MFEDIPKSLGNMKVREERHRLLEMPHIAPLTSFVHALREEMGSDYAIPYFDPLDGGIVAPMLFLLEAPGPKAVASGFISR NNPDETAKNTFLLTKEAGIDRKSTVLWNVVPWYIGSGSKIRPATIQDIKPALDSLRLLLSMLTKLQSIVLVGCKAALVES DVRRMHPAIKVFKISHPSPLFVNRLPGNREKLLEEIKRVAHAEIQL >Mature_206_residues MFEDIPKSLGNMKVREERHRLLEMPHIAPLTSFVHALREEMGSDYAIPYFDPLDGGIVAPMLFLLEAPGPKAVASGFISR NNPDETAKNTFLLTKEAGIDRKSTVLWNVVPWYIGSGSKIRPATIQDIKPALDSLRLLLSMLTKLQSIVLVGCKAALVES DVRRMHPAIKVFKISHPSPLFVNRLPGNREKLLEEIKRVAHAEIQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23026; Mature: 23026
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEDIPKSLGNMKVREERHRLLEMPHIAPLTSFVHALREEMGSDYAIPYFDPLDGGIVAP CCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH MLFLLEAPGPKAVASGFISRNNPDETAKNTFLLTKEAGIDRKSTVLWNVVPWYIGSGSKI HHHHHCCCCCHHHHHHHHCCCCCCHHHHCEEEEECCCCCCCCHHEEEEHHHHHCCCCCCC RPATIQDIKPALDSLRLLLSMLTKLQSIVLVGCKAALVESDVRRMHPAIKVFKISHPSPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCE FVNRLPGNREKLLEEIKRVAHAEIQL EEECCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFEDIPKSLGNMKVREERHRLLEMPHIAPLTSFVHALREEMGSDYAIPYFDPLDGGIVAP CCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH MLFLLEAPGPKAVASGFISRNNPDETAKNTFLLTKEAGIDRKSTVLWNVVPWYIGSGSKI HHHHHCCCCCHHHHHHHHCCCCCCHHHHCEEEEECCCCCCCCHHEEEEHHHHHCCCCCCC RPATIQDIKPALDSLRLLLSMLTKLQSIVLVGCKAALVESDVRRMHPAIKVFKISHPSPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCE FVNRLPGNREKLLEEIKRVAHAEIQL EEECCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA