Click here to switch to the map view.

The map label for this gene is yjgF [C]

Identifier: 119357332

GI number: 119357332

Start: 1738963

End: 1739445

Strand: Reverse

Name: yjgF [C]

Synonym: Cpha266_1530

Alternate gene names: 119357332

Gene position: 1739445-1738963 (Counterclockwise)

Preceding gene: 119357336

Following gene: 119357331

Centisome position: 55.5

GC content: 47.2

Gene sequence:

>483_bases
ATGATATCCATCGAAGAAAAAATTCGTGATGCAGGCTATACGCTGCCCTCTTTTTCCGCTCCGGCAGGGATGTATATTCC
TGCCATCCGAATCGGCAATCTTGTTTTTACCTCAGGTCAGCTTCCCATGAAAGAGGGCAAACTTATAGTGCCCGGAGGAA
AGGGAAAGGTTAATGAAATCAATCAGCAGGAGGCCGTTCAAGCCGCAAAAACGGCACTTCTTAATGCTCTTGCTGCGGTC
AAATCCGTTACCGGAAATCTCGATCTTGTTGAACGGATTGTCAAGCTTACCGTGTTTGTTGCCAGCGAGTCTTTCTTTTC
CAATCAGCATATCGTAGCCAATGGAGCCTCTTCGCTTCTGCAGGAGCTTTTCGGAGATCAGGGTTTTCATGTTAGAAGTG
CTGTCGGTGTAGCTGAACTGCCTCTCGACGCCAGTCTTGAGGTTGAACTTATCGTAGAGTGTAAACCTTTCTTGTCAGAG
TAG

Upstream 100 bases:

>100_bases
AATGCTTATTGATCGATGAGAGGTGAGATGAGAGCGGTTTGCGATTTACTGTAATTTGCCGTACATATCAAGAGAATAAA
AAATATAACAACGTGCTGCC

Downstream 100 bases:

>100_bases
TTATCCCATACGTTATCCTCATAACAAATTCAGGTTATTGATACGATATTATAAAGGAAAATTTTATAAAGTCTATCGAT
AACCCGGAATGGAAGAGCTG

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-Psp; Endoribonuclease; L-PSP Family Endoribonuclease; Transcriptional Regulator; Endoribonuclease Family Protein; Transcription Regulator; Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; Endoribonuclease L-PSP Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Creatininase; Translation Initiation Inhibitor YjgF; YjgF Family Translation Initiation Inhibitor; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MISIEEKIRDAGYTLPSFSAPAGMYIPAIRIGNLVFTSGQLPMKEGKLIVPGGKGKVNEINQQEAVQAAKTALLNALAAV
KSVTGNLDLVERIVKLTVFVASESFFSNQHIVANGASSLLQELFGDQGFHVRSAVGVAELPLDASLEVELIVECKPFLSE

Sequences:

>Translated_160_residues
MISIEEKIRDAGYTLPSFSAPAGMYIPAIRIGNLVFTSGQLPMKEGKLIVPGGKGKVNEINQQEAVQAAKTALLNALAAV
KSVTGNLDLVERIVKLTVFVASESFFSNQHIVANGASSLLQELFGDQGFHVRSAVGVAELPLDASLEVELIVECKPFLSE
>Mature_160_residues
MISIEEKIRDAGYTLPSFSAPAGMYIPAIRIGNLVFTSGQLPMKEGKLIVPGGKGKVNEINQQEAVQAAKTALLNALAAV
KSVTGNLDLVERIVKLTVFVASESFFSNQHIVANGASSLLQELFGDQGFHVRSAVGVAELPLDASLEVELIVECKPFLSE

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17041; Mature: 17041

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISIEEKIRDAGYTLPSFSAPAGMYIPAIRIGNLVFTSGQLPMKEGKLIVPGGKGKVNEI
CCCHHHHHHHCCCCCCCCCCCCCCEECCEEECCEEEECCCCCCCCCCEEEECCCCCCCCC
NQQEAVQAAKTALLNALAAVKSVTGNLDLVERIVKLTVFVASESFFSNQHIVANGASSLL
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCEEEECCHHHHH
QELFGDQGFHVRSAVGVAELPLDASLEVELIVECKPFLSE
HHHHCCCCCEEHHHCCCEECCCCCCCEEEEEEECCHHHCC
>Mature Secondary Structure
MISIEEKIRDAGYTLPSFSAPAGMYIPAIRIGNLVFTSGQLPMKEGKLIVPGGKGKVNEI
CCCHHHHHHHCCCCCCCCCCCCCCEECCEEECCEEEECCCCCCCCCCEEEECCCCCCCCC
NQQEAVQAAKTALLNALAAVKSVTGNLDLVERIVKLTVFVASESFFSNQHIVANGASSLL
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCEEEECCHHHHH
QELFGDQGFHVRSAVGVAELPLDASLEVELIVECKPFLSE
HHHHCCCCCEEHHHCCCEECCCCCCCEEEEEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA