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The map label for this gene is ctpA [H]

Identifier: 119357331

GI number: 119357331

Start: 1736450

End: 1738105

Strand: Reverse

Name: ctpA [H]

Synonym: Cpha266_1529

Alternate gene names: 119357331

Gene position: 1738105-1736450 (Counterclockwise)

Preceding gene: 119357332

Following gene: 119357330

Centisome position: 55.46

GC content: 47.16

Gene sequence:

>1656_bases
ATGTCTCGTGTTCTTACGGTTGTTATGATGATCGTTGTCCTTTCATTCGGAATATTTCTGGGCACCAGGCTTAATACGGG
GCATGAGCAGGCACCTGGATCACTAAAAAAAATGTATGAAGCATATGGTTTGATCCGGGAGCTTTATGTGGATGAGGTTC
AGGGAGATAGTCTCGTGAACTCTTCGATCAAGGGGATGGTAGACTATCTCGATCCTCATTCCGTCTATCTTGAGCCTGAA
AAGGTTGTCTACTCTCAAGCTGAGCTTGAGGGTAATTTTGACGGAATTGGTATAGAGTTCGATATTATCAGCGATACGCT
TCTTGTTGTTTCGCCGTTATCGGGGGGGCCGAGTGCGGCTGTAGGCGTTGCCGCAGGCGACAGGATTCTGGCGATCGATT
CGGTTTCCGCAATAGGAATTACGCATCAGGATGTTTTGAGAAAGTTGAGAGGTACCCGAGGATCTCTTGTCTATTTGCGA
GTATTCCGTCCTTTCAACGGGAAATATCTTGATTTCAAAATTACCAGGGGGCGGATTACGACATCGTCTGTCGACGCGGC
ATTTGTTCTTCCAAACGGCACCGGATATATCAGATTAAGCCGTTTTGCAGAAACAACTGCCGATGAGTTCCGTGCCGCAC
TTGCCAGGTTGAAAAAACAGGGGATGAAAAAGCTGCTTGTTGATTTGCGGGGAAATCCCGGAGGTATTCTCGATCAGGCG
GTAAGCGTAGCCGATGAATTTCTTCCGAAAGGGAAGATGATTGTCTATACAAAGAGTGTCAAGAACAGTATAGAGGACGC
TCAATATCTGGCAACGTCAAATGGCGGTTATGAAACGGGAGAGGTTATTCTGCTTGTCGACAGGGGGAGCGCGTCAGCTT
CCGAAATTCTTGCCGGGGCGCTTCAGGATAACAGACGGGCGCTTGTACTTGGCGAGTTGACGTTTGGCAAGGGTCTTGTG
CAGAGGCAGTATCCGTTTAAAGACGGCTCGGCACTTCGTCTCACCGTCTCTCGTTACTATACTCCTTCAGGTCGTCAGAT
ACAACGTCACTACAAAAAGGGTGTTGACGGGCGCGAATCATATTATAATGAAGCCGCGACAAGCCTTACGCCCCAGAAAC
TGTTTGCAGACAATGATAGTTTATTGTATTTAAAAAATGGCGATATTTCTGTGTACAGAACTGGCGGTTTCTCCGCGATA
CTCTCAGTACCTGCTCAGAAAAGCGGCGATTCGAGGAGTGTTGCTGCGTTGAGGAATGCCGGAGGAGTTGTTCCCGATTA
TTGGGTAACCGGTAAGCCCTATTCCGATTTTTATCAGGAACTGTACCGTACAGGTTCTTTCGATGATCTTGCGCAAAGAG
TGCTTGACAACCCTGCAAGTTCTGTTCAGCAGTATCGGAAATCCATGGAGCGGTTTCTTTCGGAATATTCTCAGGACAGC
AGACTGGAGTCGCTTGTCAGGAAAACGTGTGAGGCTAAAAAAATACGGTTTGACCAGTCGGGGTTTCTTTTTGATCGCAG
TAACATTGCTCTGGCAATAAAAGCAAGAATTGCCCACCAGCTTTTCGGTGCTGAAGCGCAGATAAGGGTATATGTTGTTC
AATCAGATCCTCTTGTGAAATTTTCTTCTCAAGTTCCTGTTACTCTTGTTCGCTGA

Upstream 100 bases:

>100_bases
TGAGAATATTTTTGTGTTTTTGTCTTTCGACGGGTAAAATGTAAGTTTGCAAGACTGTATGTGTTTCAGGCTCCCTTTAC
CATTTAATTGCTGATAATCA

Downstream 100 bases:

>100_bases
TCAGGATGCGGCCTTTCATTTTTTTAATCAAAACTACGGCATGCTATGTCTCTGCTTGAAAAAATCAGTACATCGACCTG
TTCGTTGCGTCTAAAAAACG

Product: C-terminal processing peptidase-3

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 551; Mature: 550

Protein sequence:

>551_residues
MSRVLTVVMMIVVLSFGIFLGTRLNTGHEQAPGSLKKMYEAYGLIRELYVDEVQGDSLVNSSIKGMVDYLDPHSVYLEPE
KVVYSQAELEGNFDGIGIEFDIISDTLLVVSPLSGGPSAAVGVAAGDRILAIDSVSAIGITHQDVLRKLRGTRGSLVYLR
VFRPFNGKYLDFKITRGRITTSSVDAAFVLPNGTGYIRLSRFAETTADEFRAALARLKKQGMKKLLVDLRGNPGGILDQA
VSVADEFLPKGKMIVYTKSVKNSIEDAQYLATSNGGYETGEVILLVDRGSASASEILAGALQDNRRALVLGELTFGKGLV
QRQYPFKDGSALRLTVSRYYTPSGRQIQRHYKKGVDGRESYYNEAATSLTPQKLFADNDSLLYLKNGDISVYRTGGFSAI
LSVPAQKSGDSRSVAALRNAGGVVPDYWVTGKPYSDFYQELYRTGSFDDLAQRVLDNPASSVQQYRKSMERFLSEYSQDS
RLESLVRKTCEAKKIRFDQSGFLFDRSNIALAIKARIAHQLFGAEAQIRVYVVQSDPLVKFSSQVPVTLVR

Sequences:

>Translated_551_residues
MSRVLTVVMMIVVLSFGIFLGTRLNTGHEQAPGSLKKMYEAYGLIRELYVDEVQGDSLVNSSIKGMVDYLDPHSVYLEPE
KVVYSQAELEGNFDGIGIEFDIISDTLLVVSPLSGGPSAAVGVAAGDRILAIDSVSAIGITHQDVLRKLRGTRGSLVYLR
VFRPFNGKYLDFKITRGRITTSSVDAAFVLPNGTGYIRLSRFAETTADEFRAALARLKKQGMKKLLVDLRGNPGGILDQA
VSVADEFLPKGKMIVYTKSVKNSIEDAQYLATSNGGYETGEVILLVDRGSASASEILAGALQDNRRALVLGELTFGKGLV
QRQYPFKDGSALRLTVSRYYTPSGRQIQRHYKKGVDGRESYYNEAATSLTPQKLFADNDSLLYLKNGDISVYRTGGFSAI
LSVPAQKSGDSRSVAALRNAGGVVPDYWVTGKPYSDFYQELYRTGSFDDLAQRVLDNPASSVQQYRKSMERFLSEYSQDS
RLESLVRKTCEAKKIRFDQSGFLFDRSNIALAIKARIAHQLFGAEAQIRVYVVQSDPLVKFSSQVPVTLVR
>Mature_550_residues
SRVLTVVMMIVVLSFGIFLGTRLNTGHEQAPGSLKKMYEAYGLIRELYVDEVQGDSLVNSSIKGMVDYLDPHSVYLEPEK
VVYSQAELEGNFDGIGIEFDIISDTLLVVSPLSGGPSAAVGVAAGDRILAIDSVSAIGITHQDVLRKLRGTRGSLVYLRV
FRPFNGKYLDFKITRGRITTSSVDAAFVLPNGTGYIRLSRFAETTADEFRAALARLKKQGMKKLLVDLRGNPGGILDQAV
SVADEFLPKGKMIVYTKSVKNSIEDAQYLATSNGGYETGEVILLVDRGSASASEILAGALQDNRRALVLGELTFGKGLVQ
RQYPFKDGSALRLTVSRYYTPSGRQIQRHYKKGVDGRESYYNEAATSLTPQKLFADNDSLLYLKNGDISVYRTGGFSAIL
SVPAQKSGDSRSVAALRNAGGVVPDYWVTGKPYSDFYQELYRTGSFDDLAQRVLDNPASSVQQYRKSMERFLSEYSQDSR
LESLVRKTCEAKKIRFDQSGFLFDRSNIALAIKARIAHQLFGAEAQIRVYVVQSDPLVKFSSQVPVTLVR

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=355, Percent_Identity=30.1408450704225, Blast_Score=130, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 60671; Mature: 60540

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVLTVVMMIVVLSFGIFLGTRLNTGHEQAPGSLKKMYEAYGLIRELYVDEVQGDSLVN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
SSIKGMVDYLDPHSVYLEPEKVVYSQAELEGNFDGIGIEFDIISDTLLVVSPLSGGPSAA
HHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEECCCCCCCCE
VGVAAGDRILAIDSVSAIGITHQDVLRKLRGTRGSLVYLRVFRPFNGKYLDFKITRGRIT
EEEECCCEEEEEECCCEECCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECCEEE
TSSVDAAFVLPNGTGYIRLSRFAETTADEFRAALARLKKQGMKKLLVDLRGNPGGILDQA
ECCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VSVADEFLPKGKMIVYTKSVKNSIEDAQYLATSNGGYETGEVILLVDRGSASASEILAGA
HHHHHHHCCCCCEEEEEHHHHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCHHHHHHHH
LQDNRRALVLGELTFGKGLVQRQYPFKDGSALRLTVSRYYTPSGRQIQRHYKKGVDGRES
HCCCCEEEEEEEECCCCCHHCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHCCCCHHHH
YYNEAATSLTPQKLFADNDSLLYLKNGDISVYRTGGFSAILSVPAQKSGDSRSVAALRNA
HHHHHHHCCCCHHHCCCCCCEEEEECCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHC
GGVVPDYWVTGKPYSDFYQELYRTGSFDDLAQRVLDNPASSVQQYRKSMERFLSEYSQDS
CCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCH
RLESLVRKTCEAKKIRFDQSGFLFDRSNIALAIKARIAHQLFGAEAQIRVYVVQSDPLVK
HHHHHHHHHHHHHHEEECCCCCEEECCCEEEEEHHHHHHHHHCCCCEEEEEEEECCCCEE
FSSQVPVTLVR
ECCCCCEEEEC
>Mature Secondary Structure 
SRVLTVVMMIVVLSFGIFLGTRLNTGHEQAPGSLKKMYEAYGLIRELYVDEVQGDSLVN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
SSIKGMVDYLDPHSVYLEPEKVVYSQAELEGNFDGIGIEFDIISDTLLVVSPLSGGPSAA
HHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEECCCCCCCCE
VGVAAGDRILAIDSVSAIGITHQDVLRKLRGTRGSLVYLRVFRPFNGKYLDFKITRGRIT
EEEECCCEEEEEECCCEECCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECCEEE
TSSVDAAFVLPNGTGYIRLSRFAETTADEFRAALARLKKQGMKKLLVDLRGNPGGILDQA
ECCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VSVADEFLPKGKMIVYTKSVKNSIEDAQYLATSNGGYETGEVILLVDRGSASASEILAGA
HHHHHHHCCCCCEEEEEHHHHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCHHHHHHHH
LQDNRRALVLGELTFGKGLVQRQYPFKDGSALRLTVSRYYTPSGRQIQRHYKKGVDGRES
HCCCCEEEEEEEECCCCCHHCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHCCCCHHHH
YYNEAATSLTPQKLFADNDSLLYLKNGDISVYRTGGFSAILSVPAQKSGDSRSVAALRNA
HHHHHHHCCCCHHHCCCCCCEEEEECCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHC
GGVVPDYWVTGKPYSDFYQELYRTGSFDDLAQRVLDNPASSVQQYRKSMERFLSEYSQDS
CCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCH
RLESLVRKTCEAKKIRFDQSGFLFDRSNIALAIKARIAHQLFGAEAQIRVYVVQSDPLVK
HHHHHHHHHHHHHHEEECCCCCEEECCCEEEEEHHHHHHHHHCCCCEEEEEEEECCCCEE
FSSQVPVTLVR
ECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]