Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357286
Identifier: 119357286
GI number: 119357286
Start: 1677027
End: 1678238
Strand: Direct
Name: 119357286
Synonym: Cpha266_1480
Alternate gene names: NA
Gene position: 1677027-1678238 (Clockwise)
Preceding gene: 119357285
Following gene: 119357288
Centisome position: 53.51
GC content: 41.83
Gene sequence:
>1212_bases TTGGTTTGGGGTGTAATCATCGATGTGTTTTGTTATCAATCCATAAAGGAGGACGAGATGTCAAACGATTATGATTTCAG GAATGACGGCAACTTAAAATACCGCATCGCTCTGAACTCGGTTAAAGGTTATGTTCACCGCTCTCATGAAGCCAATTTTT TTTGGTATACCGATAAGGGTAAGCAACCGAATGATACCGAAATTTTTCTATTAATGCCTGCGGAGAAAAACGATGGTGTG GTTTGGTATTATATTTTCATTGCCGATGCGGAGGTCGATCCTTGTTTGACGATAGGATCGAAAACAAATGAAAAGCTGGG AACTGATTCTTTTAATGGTGGTAGTAATCAACAGTTTAGCTTTGAAGATACCGGAGATAATAAAGTATATATTAAAAGTA AGGGATCAGGGCTTTATCTGTATCGGGGGGCATTAATGGATGCTCATTATGCTGTCCGACAAGCTTCGAAGAAGGATTCT GATGATTATAAATTCCAGATAGAAAGACTATCTCAAGTAATCATGCCTGCTACGGCAAATCCGGAATCTCATCCCAAACC TGGAAACATCGGAGATCCGCCCTATCCAGAAAAATACGGAGATATCCCCAATACGAAAACGGTATTCGTTGGAGAGACTT TGATCCCCTTTTACATGGTTGGTTCAGACAGTGCGTGTGTGGGTAACAATTTACGTAGTTGGCAAATTAATAACCGCCCG TATTATTGTCTTAAACGAGAGCAGCAATGGCGGCTGGATCCTAAAGGAATTATTAATCAGCCTGACATCGCACATCGGAC CGAAAAGATAAAAGTGAGTTCTGGAATTGAGCAGCAATCTGGTACGGTAATGCAAAAAAAGACAGGTTTCTCAGTAGGAA TGGACTTCGGAAACAAATCGGAAATGGGTGTCACATTTGACGGTATAACCGCGAAAACCGAGACAACACGCGCCTTCAAA ATACAGTGGCAAAATGAAGTGACAATTACGACTACCGAGTCGACGAAAATCTGGGAAACAACGGAGCGGGAACTAATAAT TGATTACGAGACAGTAAGCGGCGGGTTTACTTATATCTATTGGGTATTGACTGATATTTGGACACTTCTTTCTGGGGAAG ATACGAGTGACTCATGGGAGGTTATGACAGTATTGTCTCAGCCAACCACATTCCCGAAAAGCGCAAAGGTTACAACAACA CTTGTGGGGTAG
Upstream 100 bases:
>100_bases GTAGTAACGATGATGCTCAGGTCAGACTGAAGAGATTTTATTCTTCATGTGCCAGTTGAAATGATACTCGGTAAGTAGGA CAGAAAGTGACCGAAACAGG
Downstream 100 bases:
>100_bases TTTTTTTTGCGTTGTTAATTATACTGTAAAGCGGCAGGATATAAAGACTGCGAAATCCGTCGTGTATTGAATATCGAATA CTTAATCTGCAAAAGGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MVWGVIIDVFCYQSIKEDEMSNDYDFRNDGNLKYRIALNSVKGYVHRSHEANFFWYTDKGKQPNDTEIFLLMPAEKNDGV VWYYIFIADAEVDPCLTIGSKTNEKLGTDSFNGGSNQQFSFEDTGDNKVYIKSKGSGLYLYRGALMDAHYAVRQASKKDS DDYKFQIERLSQVIMPATANPESHPKPGNIGDPPYPEKYGDIPNTKTVFVGETLIPFYMVGSDSACVGNNLRSWQINNRP YYCLKREQQWRLDPKGIINQPDIAHRTEKIKVSSGIEQQSGTVMQKKTGFSVGMDFGNKSEMGVTFDGITAKTETTRAFK IQWQNEVTITTTESTKIWETTERELIIDYETVSGGFTYIYWVLTDIWTLLSGEDTSDSWEVMTVLSQPTTFPKSAKVTTT LVG
Sequences:
>Translated_403_residues MVWGVIIDVFCYQSIKEDEMSNDYDFRNDGNLKYRIALNSVKGYVHRSHEANFFWYTDKGKQPNDTEIFLLMPAEKNDGV VWYYIFIADAEVDPCLTIGSKTNEKLGTDSFNGGSNQQFSFEDTGDNKVYIKSKGSGLYLYRGALMDAHYAVRQASKKDS DDYKFQIERLSQVIMPATANPESHPKPGNIGDPPYPEKYGDIPNTKTVFVGETLIPFYMVGSDSACVGNNLRSWQINNRP YYCLKREQQWRLDPKGIINQPDIAHRTEKIKVSSGIEQQSGTVMQKKTGFSVGMDFGNKSEMGVTFDGITAKTETTRAFK IQWQNEVTITTTESTKIWETTERELIIDYETVSGGFTYIYWVLTDIWTLLSGEDTSDSWEVMTVLSQPTTFPKSAKVTTT LVG >Mature_403_residues MVWGVIIDVFCYQSIKEDEMSNDYDFRNDGNLKYRIALNSVKGYVHRSHEANFFWYTDKGKQPNDTEIFLLMPAEKNDGV VWYYIFIADAEVDPCLTIGSKTNEKLGTDSFNGGSNQQFSFEDTGDNKVYIKSKGSGLYLYRGALMDAHYAVRQASKKDS DDYKFQIERLSQVIMPATANPESHPKPGNIGDPPYPEKYGDIPNTKTVFVGETLIPFYMVGSDSACVGNNLRSWQINNRP YYCLKREQQWRLDPKGIINQPDIAHRTEKIKVSSGIEQQSGTVMQKKTGFSVGMDFGNKSEMGVTFDGITAKTETTRAFK IQWQNEVTITTTESTKIWETTERELIIDYETVSGGFTYIYWVLTDIWTLLSGEDTSDSWEVMTVLSQPTTFPKSAKVTTT LVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45707; Mature: 45707
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWGVIIDVFCYQSIKEDEMSNDYDFRNDGNLKYRIALNSVKGYVHRSHEANFFWYTDKG CHHHEEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCEEEEECCC KQPNDTEIFLLMPAEKNDGVVWYYIFIADAEVDPCLTIGSKTNEKLGTDSFNGGSNQQFS CCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEE FEDTGDNKVYIKSKGSGLYLYRGALMDAHYAVRQASKKDSDDYKFQIERLSQVIMPATAN EECCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCCCC PESHPKPGNIGDPPYPEKYGDIPNTKTVFVGETLIPFYMVGSDSACVGNNLRSWQINNRP CCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCEEEEEEECCCCCEECCCCEEEEECCCC YYCLKREQQWRLDPKGIINQPDIAHRTEKIKVSSGIEQQSGTVMQKKTGFSVGMDFGNKS EEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCEEEECCCCCC EMGVTFDGITAKTETTRAFKIQWQNEVTITTTESTKIWETTERELIIDYETVSGGFTYIY CCCEEECCEEECCCCCEEEEEEECCEEEEEECCCCEEEECCCCEEEEEEEECCCCEEEEE WVLTDIWTLLSGEDTSDSWEVMTVLSQPTTFPKSAKVTTTLVG HHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEC >Mature Secondary Structure MVWGVIIDVFCYQSIKEDEMSNDYDFRNDGNLKYRIALNSVKGYVHRSHEANFFWYTDKG CHHHEEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCEEEEECCC KQPNDTEIFLLMPAEKNDGVVWYYIFIADAEVDPCLTIGSKTNEKLGTDSFNGGSNQQFS CCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEE FEDTGDNKVYIKSKGSGLYLYRGALMDAHYAVRQASKKDSDDYKFQIERLSQVIMPATAN EECCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCCCC PESHPKPGNIGDPPYPEKYGDIPNTKTVFVGETLIPFYMVGSDSACVGNNLRSWQINNRP CCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCEEEEEEECCCCCEECCCCEEEEECCCC YYCLKREQQWRLDPKGIINQPDIAHRTEKIKVSSGIEQQSGTVMQKKTGFSVGMDFGNKS EEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCEEEECCCCCC EMGVTFDGITAKTETTRAFKIQWQNEVTITTTESTKIWETTERELIIDYETVSGGFTYIY CCCEEECCEEECCCCCEEEEEEECCEEEEEECCCCEEEECCCCEEEEEEEECCCCEEEEE WVLTDIWTLLSGEDTSDSWEVMTVLSQPTTFPKSAKVTTTLVG HHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA