Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
---|---|
Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is fba [H]
Identifier: 119357140
GI number: 119357140
Start: 1524013
End: 1524987
Strand: Direct
Name: fba [H]
Synonym: Cpha266_1329
Alternate gene names: 119357140
Gene position: 1524013-1524987 (Clockwise)
Preceding gene: 119357138
Following gene: 119357146
Centisome position: 48.63
GC content: 48.92
Gene sequence:
>975_bases ATGCAAAACATTTCAGTCGGCTTTAAAGAACTGGGACTTGTCAACAGCAGGGACCTGTTTGCTAAAGCTGTCAGCGGGGG TTACGCGATTCCCGCATATAATTTCAATAATCTCGAACAGCTCCAGGCAATCATCATGGCCTGTGCCGAAACCGCTTCGC CGGTAATTTTACAGGTATCCAAAGGCGCAAGAAGCTATGCCAACGAAACGCTTCTGCGTTTTCTTGCCCAGGGTGCCGTG GCCTATGCTGCAGAACTTGGAACACCTGTTCCTATTGTCCTTCATCTCGATCATGGCGACAGTTTTGAACTGTGCAAGGA TTGTATCGAGTCGGGGTTTTCATCGGTCATGATCGATGGTTCGCATCTTCCCTATGAAGAAAACGTCGCTCTCACGAAAA AAGTTGTCGAATATGCTCATCAGTTCGATGTGACGGTTGAAGGCGAACTTGGCGTTCTTGCCGGCATCGAAGACGAGATT TCGGCTGCGCACCATACCTATACACAGCCTGAAGAGGTTGAGGATTTTGTGGCAAAAACCGGCGTTGACAGTCTTGCCAT CTCAATTGGTACATCACACGGCGCATTCAAGTTCAAACCAGGCGAAGACCCGAAAATCCGTCTTGATATTCTGACCGAAA TTGAACGCCGCATTCCCGGATTTCCCATCGTGCTGCATGGCTCCTCTTCCGTTCCGCAGGACCTTGTTAAAACCATCAAC GAGCATGGCGGAAAACTGAAGGATGCTATCGGTATCAGCGAAGACCAGCTTCGTCTGGCTGCAAAGTCGGCGGTTTGCAA AATCAACATCGATTCCGATGGACGTCTTGCCATGACTGCGGCAATTCGCAAAGTGCTCGATGAAAAGCCTGAAGAGTTTG ACCCAAGAAAATATCTTGGTCCTGCAAGGGATGCGCTGAAACAGCTTTATATCCACAAGATCATCAACGTTCTCGGATCG AACAACAAAGCCTGA
Upstream 100 bases:
>100_bases AACTATTATATTGCAATTCTCTATAAATCAATTTACTGTTTTTTCATAAACCGGCTAAAAAAAACAGCGGCGGATAATAA CAATTAAAGGAGACCTTTCA
Downstream 100 bases:
>100_bases CTTATCTGAAATCAGTCAAAAAAGGCGCTCAACGGGCGCCTTTTTTGTTGGGGGAAAAGGGATTTTCTGCTAAGAGCGTA AAAGATCGAGAAAACGGGCT
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MQNISVGFKELGLVNSRDLFAKAVSGGYAIPAYNFNNLEQLQAIIMACAETASPVILQVSKGARSYANETLLRFLAQGAV AYAAELGTPVPIVLHLDHGDSFELCKDCIESGFSSVMIDGSHLPYEENVALTKKVVEYAHQFDVTVEGELGVLAGIEDEI SAAHHTYTQPEEVEDFVAKTGVDSLAISIGTSHGAFKFKPGEDPKIRLDILTEIERRIPGFPIVLHGSSSVPQDLVKTIN EHGGKLKDAIGISEDQLRLAAKSAVCKINIDSDGRLAMTAAIRKVLDEKPEEFDPRKYLGPARDALKQLYIHKIINVLGS NNKA
Sequences:
>Translated_324_residues MQNISVGFKELGLVNSRDLFAKAVSGGYAIPAYNFNNLEQLQAIIMACAETASPVILQVSKGARSYANETLLRFLAQGAV AYAAELGTPVPIVLHLDHGDSFELCKDCIESGFSSVMIDGSHLPYEENVALTKKVVEYAHQFDVTVEGELGVLAGIEDEI SAAHHTYTQPEEVEDFVAKTGVDSLAISIGTSHGAFKFKPGEDPKIRLDILTEIERRIPGFPIVLHGSSSVPQDLVKTIN EHGGKLKDAIGISEDQLRLAAKSAVCKINIDSDGRLAMTAAIRKVLDEKPEEFDPRKYLGPARDALKQLYIHKIINVLGS NNKA >Mature_324_residues MQNISVGFKELGLVNSRDLFAKAVSGGYAIPAYNFNNLEQLQAIIMACAETASPVILQVSKGARSYANETLLRFLAQGAV AYAAELGTPVPIVLHLDHGDSFELCKDCIESGFSSVMIDGSHLPYEENVALTKKVVEYAHQFDVTVEGELGVLAGIEDEI SAAHHTYTQPEEVEDFVAKTGVDSLAISIGTSHGAFKFKPGEDPKIRLDILTEIERRIPGFPIVLHGSSSVPQDLVKTIN EHGGKLKDAIGISEDQLRLAAKSAVCKINIDSDGRLAMTAAIRKVLDEKPEEFDPRKYLGPARDALKQLYIHKIINVLGS NNKA
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=316, Percent_Identity=36.7088607594937, Blast_Score=196, Evalue=2e-51, Organism=Escherichia coli, GI87082041, Length=315, Percent_Identity=34.6031746031746, Blast_Score=190, Evalue=1e-49, Organism=Escherichia coli, GI1788072, Length=305, Percent_Identity=30.4918032786885, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1789293, Length=315, Percent_Identity=26.031746031746, Blast_Score=78, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6322790, Length=343, Percent_Identity=26.530612244898, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011289 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 35126; Mature: 35126
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00602 ALDOLASE_CLASS_II_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNISVGFKELGLVNSRDLFAKAVSGGYAIPAYNFNNLEQLQAIIMACAETASPVILQVS CCCCCCCHHHHCCCCCHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEC KGARSYANETLLRFLAQGAVAYAAELGTPVPIVLHLDHGDSFELCKDCIESGFSSVMIDG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECC SHLPYEENVALTKKVVEYAHQFDVTVEGELGVLAGIEDEISAAHHTYTQPEEVEDFVAKT CCCCCCCCHHHHHHHHHHHHHCCCEECCCCCEEECCHHHHHHHHCCCCCHHHHHHHHHHC GVDSLAISIGTSHGAFKFKPGEDPKIRLDILTEIERRIPGFPIVLHGSSSVPQDLVKTIN CCCCEEEEEECCCCEEEECCCCCCEEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH EHGGKLKDAIGISEDQLRLAAKSAVCKINIDSDGRLAMTAAIRKVLDEKPEEFDPRKYLG HCCCCCHHHCCCCHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHCC PARDALKQLYIHKIINVLGSNNKA HHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQNISVGFKELGLVNSRDLFAKAVSGGYAIPAYNFNNLEQLQAIIMACAETASPVILQVS CCCCCCCHHHHCCCCCHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEC KGARSYANETLLRFLAQGAVAYAAELGTPVPIVLHLDHGDSFELCKDCIESGFSSVMIDG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECC SHLPYEENVALTKKVVEYAHQFDVTVEGELGVLAGIEDEISAAHHTYTQPEEVEDFVAKT CCCCCCCCHHHHHHHHHHHHHCCCEECCCCCEEECCHHHHHHHHCCCCCHHHHHHHHHHC GVDSLAISIGTSHGAFKFKPGEDPKIRLDILTEIERRIPGFPIVLHGSSSVPQDLVKTIN CCCCEEEEEECCCCEEEECCCCCCEEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH EHGGKLKDAIGISEDQLRLAAKSAVCKINIDSDGRLAMTAAIRKVLDEKPEEFDPRKYLG HCCCCCHHHCCCCHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHCC PARDALKQLYIHKIINVLGSNNKA HHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]